FFCP PHASE1:Hg19::chr11:18258342..18258360,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6291|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10516|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_uc001mny.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_SAA4_5end|id=chr11:18258342..18258360,-|ontology_enrichment_celltype=CL:0000181!2.45e-25!12;CL:0000417!2.45e-25!12;CL:0000668!2.45e-25!12;CL:0000414!2.45e-25!12;CL:0000412!2.45e-25!12;CL:0000182!2.45e-25!12|ontology_enrichment_celltype_v019=CL:0000182;1.16e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-45,12;CL:0000223,2.54e-09,58|ontology_enrichment_development_v019=UBERON:0004161;1.21e-34;11!UBERON:0009497;2.38e-29;13!UBERON:0001041;8.84e-13;30!UBERON:0003104;2.38e-12;31!CL:0000223;3.69e-07;58|ontology_enrichment_disease=DOID:114!3.37e-17!2;DOID:178!2.46e-09!1;DOID:326!2.46e-09!1;DOID:3978!2.46e-09!1;DOID:3394!2.46e-09!1;DOID:5844!2.46e-09!1;DOID:1287!4.59e-09!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!6.38e-28!19;UBERON:0006925!6.38e-28!19;UBERON:0008836!6.38e-28!19;UBERON:0005057!2.22e-25!26;UBERON:0008835!5.59e-24!22;UBERON:0003894!5.59e-24!22;UBERON:0009854!6.82e-23!23;UBERON:0007499!5.57e-21!25;UBERON:0009497!5.57e-21!25;UBERON:0000015!5.57e-21!25;UBERON:0002423!5.57e-21!25;UBERON:0006235!5.57e-21!25;UBERON:0004161!5.57e-21!25;UBERON:0009856!3.91e-20!26;UBERON:0002368!1.85e-18!35;UBERON:0005172!8.01e-17!55;UBERON:0005173!8.01e-17!55;UBERON:0002365!1.01e-16!31;UBERON:0002330!1.01e-16!31;UBERON:0002417!5.45e-15!61;UBERON:0000916!5.45e-15!61;UBERON:0003929!3.39e-14!54;UBERON:0000949!4.59e-14!45;UBERON:0002530!2.07e-10!59;UBERON:0002146!1.25e-09!1;UBERON:0005623!1.25e-09!1;UBERON:0001301!1.48e-09!1;UBERON:0005911!8.30e-09!82;UBERON:0005177!9.18e-08!107;UBERON:0009569!2.96e-07!113|ontology_enrichment_uberon_v019=UBERON:0002107;5.90e-51;19!UBERON:0006925;5.90e-51;19!UBERON:0002423;1.23e-38;25!UBERON:0002365;6.68e-30;31!UBERON:0002330;6.68e-30;31!UBERON:0002368;2.26e-26;33!UBERON:0000949;2.72e-19;43!UBERON:0005172;4.20e-14;52!UBERON:0005173;4.20e-14;52!UBERON:0002417;5.76e-12;58!UBERON:0000916;5.76e-12;58!UBERON:0002530;4.88e-10;57!UBERON:0001007;1.18e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.90e-51,19;UBERON:0006925,5.90e-51,19;UBERON:0008836,5.90e-51,19;UBERON:0008835,5.88e-44,22;UBERON:0003894,5.88e-44,22;UBERON:0009854,4.98e-42,23;UBERON:0007499,1.23e-38,25;UBERON:0009497,1.23e-38,25;UBERON:0000015,1.23e-38,25;UBERON:0002423,1.23e-38,25;UBERON:0006235,1.23e-38,25;UBERON:0004161,1.23e-38,25;UBERON:0009856,3.92e-37,26;UBERON:0002365,4.49e-31,31;UBERON:0002330,4.49e-31,31;UBERON:0002368,1.81e-27,35;UBERON:0005172,3.27e-22,54;UBERON:0005173,3.27e-22,54;UBERON:0000949,2.98e-21,45;UBERON:0002417,6.39e-20,60;UBERON:0000916,6.39e-20,60;UBERON:0003929,1.28e-17,54;UBERON:0002530,4.48e-16,59;UBERON:0001041,1.67e-13,87;UBERON:0005177,1.61e-11,101;UBERON:0005911,2.17e-11,82;UBERON:0009569,2.63e-10,112;UBERON:0004921,1.19e-09,118;UBERON:0003914,8.96e-08,117;UBERON:0001007,1.06e-07,145;UBERON:0001555,1.06e-07,145;UBERON:0007026,1.06e-07,145;UBERON:0005256,2.00e-07,122;UBERON:0001048,6.02e-07,160;UBERON:0004119,6.74e-07,160;UBERON:0000925,6.74e-07,160;UBERON:0006595,6.74e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3547.87342466305,1403.47726541565,760.346609898967,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,338.901887309359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,348.049631471753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,46.0881616497258,46.8122075605025,47.2498842417836,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1180.47824227695,442.573008966819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10516 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001mny.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_SAA4_5end | |||
|id=chr11:18258342..18258360,- | |||
|ontology_enrichment_celltype=CL:0000181!2.45e-25!12;CL:0000417!2.45e-25!12;CL:0000668!2.45e-25!12;CL:0000414!2.45e-25!12;CL:0000412!2.45e-25!12;CL:0000182!2.45e-25!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.16e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-45,12;CL:0000223,2.54e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.21e-34;11!UBERON:0009497;2.38e-29;13!UBERON:0001041;8.84e-13;30!UBERON:0003104;2.38e-12;31!CL:0000223;3.69e-07;58 | |||
|ontology_enrichment_disease=DOID:114!3.37e-17!2;DOID:178!2.46e-09!1;DOID:326!2.46e-09!1;DOID:3978!2.46e-09!1;DOID:3394!2.46e-09!1;DOID:5844!2.46e-09!1;DOID:1287!4.59e-09!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.38e-28!19;UBERON:0006925!6.38e-28!19;UBERON:0008836!6.38e-28!19;UBERON:0005057!2.22e-25!26;UBERON:0008835!5.59e-24!22;UBERON:0003894!5.59e-24!22;UBERON:0009854!6.82e-23!23;UBERON:0007499!5.57e-21!25;UBERON:0009497!5.57e-21!25;UBERON:0000015!5.57e-21!25;UBERON:0002423!5.57e-21!25;UBERON:0006235!5.57e-21!25;UBERON:0004161!5.57e-21!25;UBERON:0009856!3.91e-20!26;UBERON:0002368!1.85e-18!35;UBERON:0005172!8.01e-17!55;UBERON:0005173!8.01e-17!55;UBERON:0002365!1.01e-16!31;UBERON:0002330!1.01e-16!31;UBERON:0002417!5.45e-15!61;UBERON:0000916!5.45e-15!61;UBERON:0003929!3.39e-14!54;UBERON:0000949!4.59e-14!45;UBERON:0002530!2.07e-10!59;UBERON:0002146!1.25e-09!1;UBERON:0005623!1.25e-09!1;UBERON:0001301!1.48e-09!1;UBERON:0005911!8.30e-09!82;UBERON:0005177!9.18e-08!107;UBERON:0009569!2.96e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.90e-51;19!UBERON:0006925;5.90e-51;19!UBERON:0002423;1.23e-38;25!UBERON:0002365;6.68e-30;31!UBERON:0002330;6.68e-30;31!UBERON:0002368;2.26e-26;33!UBERON:0000949;2.72e-19;43!UBERON:0005172;4.20e-14;52!UBERON:0005173;4.20e-14;52!UBERON:0002417;5.76e-12;58!UBERON:0000916;5.76e-12;58!UBERON:0002530;4.88e-10;57!UBERON:0001007;1.18e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.90e-51,19;UBERON:0006925,5.90e-51,19;UBERON:0008836,5.90e-51,19;UBERON:0008835,5.88e-44,22;UBERON:0003894,5.88e-44,22;UBERON:0009854,4.98e-42,23;UBERON:0007499,1.23e-38,25;UBERON:0009497,1.23e-38,25;UBERON:0000015,1.23e-38,25;UBERON:0002423,1.23e-38,25;UBERON:0006235,1.23e-38,25;UBERON:0004161,1.23e-38,25;UBERON:0009856,3.92e-37,26;UBERON:0002365,4.49e-31,31;UBERON:0002330,4.49e-31,31;UBERON:0002368,1.81e-27,35;UBERON:0005172,3.27e-22,54;UBERON:0005173,3.27e-22,54;UBERON:0000949,2.98e-21,45;UBERON:0002417,6.39e-20,60;UBERON:0000916,6.39e-20,60;UBERON:0003929,1.28e-17,54;UBERON:0002530,4.48e-16,59;UBERON:0001041,1.67e-13,87;UBERON:0005177,1.61e-11,101;UBERON:0005911,2.17e-11,82;UBERON:0009569,2.63e-10,112;UBERON:0004921,1.19e-09,118;UBERON:0003914,8.96e-08,117;UBERON:0001007,1.06e-07,145;UBERON:0001555,1.06e-07,145;UBERON:0007026,1.06e-07,145;UBERON:0005256,2.00e-07,122;UBERON:0001048,6.02e-07,160;UBERON:0004119,6.74e-07,160;UBERON:0000925,6.74e-07,160;UBERON:0006595,6.74e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3547.87342466305,1403.47726541565,760.346609898967,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,338.901887309359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,348.049631471753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0,0,46.0881616497258,46.8122075605025,47.2498842417836,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1180.47824227695,442.573008966819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SAA4 | |||
}} |
Revision as of 16:59, 10 September 2013
Short description: | p1@SAA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SAA4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_uc001mny.2_5end |
EntrezGene: | SAA4 |
HGNC: | 10516 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-45 | 12 |
endodermal cell | 2.54e-09 | 58 |
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