FFCP PHASE1:Hg19::chr11:72432903..72432945,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116985|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16925|TSSclassifier=S|UniProt=E7EU13,B2RTS2|association_with_transcript=127bp_to_ENST00000426523,ENST00000429686_5end|coexpression_cluster_id=C564|description=CAGE_peak_7_at_ARAP1_5end|id=chr11:72432903..72432945,-|ontology_enrichment_celltype=CL:0002076!5.70e-14!43;CL:0000223!1.45e-09!59;CL:0002368!3.03e-09!13;CL:0002159!7.47e-09!13;CL:0002251!7.92e-08!21;CL:0000622!3.73e-07!5;CL:0000066!6.10e-07!254|ontology_enrichment_celltype_v019=CL:0002076;1.03e-29;42!CL:0002368;5.41e-28;13!CL:0002251;9.24e-21;20!CL:0002159;3.00e-20;14!CL:0000622;1.04e-18;5!CL:0000244;2.14e-16;4!CL:0000731;2.14e-16;4!CL:0000154;1.52e-15;6!CL:0002202;4.34e-15;9!CL:0002632;4.34e-15;9!CL:0002328;1.22e-12;3!CL:0000307;4.37e-12;3!CL:0002623;5.17e-12;3!CL:0002621;1.75e-11;3!CL:0000240;2.26e-10;6!CL:0000311;2.26e-10;6!CL:0000079;2.26e-10;6!CL:0000237;2.26e-10;6!CL:0000150;2.92e-10;9!CL:0000362;3.59e-10;9!CL:0000575;3.38e-09;2!CL:0002327;4.43e-09;4!CL:0000317;2.05e-08;2!CL:1000448;2.05e-08;2!CL:0002308;2.05e-08;2!CL:0002140;2.05e-08;2!CL:0002077;3.86e-08;34!CL:0000312;2.86e-07;5|ontology_enrichment_celltype_v019_2=CL:0002076,8.61e-39,42;CL:0000223,9.16e-32,58;CL:0002368,5.27e-28,13;CL:0002251,9.07e-21,20;CL:0000066,2.85e-20,253;CL:0002159,2.97e-20,14;CL:0000622,8.35e-19,5;CL:0000244,1.84e-16,4;CL:0000731,1.84e-16,4;CL:0000154,1.26e-15,6;CL:0002202,4.29e-15,9;CL:0002632,4.29e-15,9;CL:0002328,1.15e-12,3;CL:0000068,4.54e-12,3;CL:0000069,4.54e-12,3;CL:0000307,4.54e-12,3;CL:0000377,4.54e-12,3;CL:0002623,4.71e-12,3;CL:0002621,1.60e-11,3;CL:0000240,2.34e-10,6;CL:0000311,2.34e-10,6;CL:0000079,2.34e-10,6;CL:0000237,2.34e-10,6;CL:0000036,2.34e-10,6;CL:0000357,2.34e-10,6;CL:0000114,2.34e-10,6;CL:0000150,2.59e-10,9;CL:0000362,3.42e-10,9;CL:0000575,3.44e-09,2;CL:0002321,3.71e-09,250;CL:0002327,4.02e-09,4;CL:0002077,4.86e-09,34;CL:0000317,1.80e-08,2;CL:1000448,1.80e-08,2;CL:0002308,1.80e-08,2;CL:0002140,1.80e-08,2;CL:0000076,2.18e-08,63;CL:0000312,2.92e-07,5|ontology_enrichment_development_v019=CL:0000223;2.43e-15;58!CL:0000377;4.37e-12;3!CL:0000357;2.26e-10;6!CL:0000114;2.26e-10;6|ontology_enrichment_disease=DOID:1749!9.19e-09!14|ontology_enrichment_disease_v019=DOID:1749;1.17e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-08,14|ontology_enrichment_uberon=UBERON:0001004!2.00e-09!72;UBERON:0000166!1.37e-07!21;UBERON:0004119!4.40e-07!169;UBERON:0000925!4.40e-07!169;UBERON:0006595!4.40e-07!169;UBERON:0000365!5.75e-07!5;UBERON:0000161!6.06e-07!35|ontology_enrichment_uberon_v019=UBERON:0000486;8.41e-15;12!UBERON:0000161;3.41e-14;19!UBERON:0000166;3.41e-14;19!UBERON:0000165;1.01e-13;28!UBERON:0003729;3.97e-13;13!UBERON:0000365;4.00e-13;5!UBERON:0004815;1.22e-12;3!UBERON:0002031;1.22e-12;3!UBERON:0001949;1.75e-11;3!UBERON:0005910;6.14e-11;6!UBERON:0001911;4.43e-09;4!UBERON:0007196;9.08e-09;15!UBERON:0001558;9.08e-09;15!UBERON:0005911;1.57e-08;36!UBERON:0002419;2.05e-08;2!UBERON:0007771;2.05e-08;2!UBERON:0003297;2.05e-08;2!UBERON:0001821;2.05e-08;2!UBERON:0003487;2.05e-08;2!UBERON:0001820;2.05e-08;2!UBERON:0000344;3.49e-08;20!UBERON:0002365;6.76e-08;31!UBERON:0002330;6.76e-08;31!UBERON:0002185;9.78e-08;5!UBERON:0001828;2.70e-07;8!UBERON:0001004;3.94e-07;65!UBERON:0001555;7.42e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.36e-15,74;UBERON:0000166,9.26e-15,22;UBERON:0004119,8.19e-14,160;UBERON:0000925,8.19e-14,160;UBERON:0006595,8.19e-14,160;UBERON:0000365,3.55e-13,5;UBERON:0000165,3.58e-13,29;UBERON:0000930,3.58e-13,29;UBERON:0003729,4.12e-13,13;UBERON:0003102,9.74e-13,99;UBERON:0004815,1.15e-12,3;UBERON:0002031,1.15e-12,3;UBERON:0001949,1.60e-11,3;UBERON:0000033,1.89e-11,56;UBERON:0005910,5.56e-11,6;UBERON:0000161,3.56e-10,36;UBERON:0001444,4.94e-10,49;UBERON:0000153,5.15e-10,62;UBERON:0007811,5.15e-10,62;UBERON:0001911,4.02e-09,4;UBERON:0005333,4.02e-09,4;UBERON:0008425,4.02e-09,4;UBERON:0005311,4.02e-09,4;UBERON:0007196,9.02e-09,15;UBERON:0001558,9.02e-09,15;UBERON:0002419,1.80e-08,2;UBERON:0007771,1.80e-08,2;UBERON:0003297,1.80e-08,2;UBERON:0001821,1.80e-08,2;UBERON:0003487,1.80e-08,2;UBERON:0001820,1.80e-08,2;UBERON:0005089,1.80e-08,2;UBERON:0005088,1.80e-08,2;UBERON:0000344,3.58e-08,20;UBERON:0002365,3.97e-08,31;UBERON:0002330,3.97e-08,31;UBERON:0002185,9.46e-08,5;UBERON:0001828,2.72e-07,8;UBERON:0001007,4.36e-07,145;UBERON:0001555,4.36e-07,145;UBERON:0007026,4.36e-07,145|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,13.7913183671839,6.32532429434325,5.9160641626686,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0.512321413058201,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0.209658645508376,0.112328631146495,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16925 | |||
|TSSclassifier=S | |||
|UniProt=E7EU13,B2RTS2 | |||
|association_with_transcript=127bp_to_ENST00000426523,ENST00000429686_5end | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_7_at_ARAP1_5end | |||
|id=chr11:72432903..72432945,- | |||
|ontology_enrichment_celltype=CL:0002076!5.70e-14!43;CL:0000223!1.45e-09!59;CL:0002368!3.03e-09!13;CL:0002159!7.47e-09!13;CL:0002251!7.92e-08!21;CL:0000622!3.73e-07!5;CL:0000066!6.10e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.03e-29;42!CL:0002368;5.41e-28;13!CL:0002251;9.24e-21;20!CL:0002159;3.00e-20;14!CL:0000622;1.04e-18;5!CL:0000244;2.14e-16;4!CL:0000731;2.14e-16;4!CL:0000154;1.52e-15;6!CL:0002202;4.34e-15;9!CL:0002632;4.34e-15;9!CL:0002328;1.22e-12;3!CL:0000307;4.37e-12;3!CL:0002623;5.17e-12;3!CL:0002621;1.75e-11;3!CL:0000240;2.26e-10;6!CL:0000311;2.26e-10;6!CL:0000079;2.26e-10;6!CL:0000237;2.26e-10;6!CL:0000150;2.92e-10;9!CL:0000362;3.59e-10;9!CL:0000575;3.38e-09;2!CL:0002327;4.43e-09;4!CL:0000317;2.05e-08;2!CL:1000448;2.05e-08;2!CL:0002308;2.05e-08;2!CL:0002140;2.05e-08;2!CL:0002077;3.86e-08;34!CL:0000312;2.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.61e-39,42;CL:0000223,9.16e-32,58;CL:0002368,5.27e-28,13;CL:0002251,9.07e-21,20;CL:0000066,2.85e-20,253;CL:0002159,2.97e-20,14;CL:0000622,8.35e-19,5;CL:0000244,1.84e-16,4;CL:0000731,1.84e-16,4;CL:0000154,1.26e-15,6;CL:0002202,4.29e-15,9;CL:0002632,4.29e-15,9;CL:0002328,1.15e-12,3;CL:0000068,4.54e-12,3;CL:0000069,4.54e-12,3;CL:0000307,4.54e-12,3;CL:0000377,4.54e-12,3;CL:0002623,4.71e-12,3;CL:0002621,1.60e-11,3;CL:0000240,2.34e-10,6;CL:0000311,2.34e-10,6;CL:0000079,2.34e-10,6;CL:0000237,2.34e-10,6;CL:0000036,2.34e-10,6;CL:0000357,2.34e-10,6;CL:0000114,2.34e-10,6;CL:0000150,2.59e-10,9;CL:0000362,3.42e-10,9;CL:0000575,3.44e-09,2;CL:0002321,3.71e-09,250;CL:0002327,4.02e-09,4;CL:0002077,4.86e-09,34;CL:0000317,1.80e-08,2;CL:1000448,1.80e-08,2;CL:0002308,1.80e-08,2;CL:0002140,1.80e-08,2;CL:0000076,2.18e-08,63;CL:0000312,2.92e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;2.43e-15;58!CL:0000377;4.37e-12;3!CL:0000357;2.26e-10;6!CL:0000114;2.26e-10;6 | |||
|ontology_enrichment_disease=DOID:1749!9.19e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.17e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.21e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.00e-09!72;UBERON:0000166!1.37e-07!21;UBERON:0004119!4.40e-07!169;UBERON:0000925!4.40e-07!169;UBERON:0006595!4.40e-07!169;UBERON:0000365!5.75e-07!5;UBERON:0000161!6.06e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;8.41e-15;12!UBERON:0000161;3.41e-14;19!UBERON:0000166;3.41e-14;19!UBERON:0000165;1.01e-13;28!UBERON:0003729;3.97e-13;13!UBERON:0000365;4.00e-13;5!UBERON:0004815;1.22e-12;3!UBERON:0002031;1.22e-12;3!UBERON:0001949;1.75e-11;3!UBERON:0005910;6.14e-11;6!UBERON:0001911;4.43e-09;4!UBERON:0007196;9.08e-09;15!UBERON:0001558;9.08e-09;15!UBERON:0005911;1.57e-08;36!UBERON:0002419;2.05e-08;2!UBERON:0007771;2.05e-08;2!UBERON:0003297;2.05e-08;2!UBERON:0001821;2.05e-08;2!UBERON:0003487;2.05e-08;2!UBERON:0001820;2.05e-08;2!UBERON:0000344;3.49e-08;20!UBERON:0002365;6.76e-08;31!UBERON:0002330;6.76e-08;31!UBERON:0002185;9.78e-08;5!UBERON:0001828;2.70e-07;8!UBERON:0001004;3.94e-07;65!UBERON:0001555;7.42e-07;54 | |||
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| |||
|short_description=p7@ARAP1 | |||
}} |
Revision as of 19:31, 10 September 2013
Short description: | p7@ARAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ARAP1_5end |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | 127bp_to_ENST00000426523, ENST00000429686_5end |
EntrezGene: | ARAP1 |
HGNC: | 16925 |
UniProt: | E7EU13B2RTS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.21e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.