FFCP PHASE1:Hg19::chr12:11463353..11463372,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5545|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9340|TSSclassifier=S|UniProt=E9PAL0,E7EXA8,P10163|association_with_transcript=0bp_to_ENST00000279575,ENST00000445719,ENST00000535904,NM_002723,uc001qzf.1,uc001qzt.2_5end|coexpression_cluster_id=C70|description=CAGE_peak_1_at_PRB4_5end|id=chr12:11463353..11463372,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;8.70e-26;2!UBERON:0008801;3.08e-14;1!UBERON:0001045;9.73e-14;1!UBERON:0006298;1.42e-13;1!UBERON:0004872;4.75e-08;7!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2!UBERON:0007297;2.25e-07;2|ontology_enrichment_disease=DOID:0050619!2.50e-08!1;DOID:1357!2.50e-08!1|ontology_enrichment_disease_v019=DOID:0050619;1.83e-13;1!DOID:1357;1.83e-13;1|ontology_enrichment_disease_v019_2=DOID:0050619,1.61e-13,1;DOID:1357,1.61e-13,1|ontology_enrichment_uberon=UBERON:0007023!3.67e-18!115;UBERON:0003408!2.67e-17!10;UBERON:0001829!2.20e-15!2;UBERON:0004177!2.22e-15!7;UBERON:0000341!5.52e-15!2;UBERON:0001004!6.70e-14!72;UBERON:0001041!6.43e-13!98;UBERON:0001044!2.30e-11!6;UBERON:0003293!2.30e-11!6;UBERON:0003294!2.30e-11!6;UBERON:0010047!2.30e-11!6;UBERON:0000167!2.30e-11!6;UBERON:0000974!3.87e-11!10;UBERON:0001042!4.30e-11!10;UBERON:0009145!4.30e-11!10;UBERON:0000077!1.78e-10!130;UBERON:0004921!1.78e-10!129;UBERON:0004185!1.78e-10!129;UBERON:0006947!3.58e-10!3;UBERON:0004054!3.58e-10!3;UBERON:0006562!4.25e-10!11;UBERON:0002106!9.36e-10!3;UBERON:0004854!9.36e-10!3;UBERON:0009034!9.36e-10!3;UBERON:0002095!9.36e-10!3;UBERON:0004782!9.36e-10!3;UBERON:0003281!9.36e-10!3;UBERON:0009664!9.36e-10!3;UBERON:0002296!9.36e-10!3;UBERON:0005602!9.36e-10!3;UBERON:0001179!9.36e-10!3;UBERON:0006293!9.36e-10!3;UBERON:0000078!1.12e-09!18;UBERON:0000065!3.50e-09!53;UBERON:0000464!7.57e-09!104;UBERON:0001557!8.99e-09!19;UBERON:0001831!9.79e-09!1;UBERON:0001567!9.79e-09!1;UBERON:0008801!9.79e-09!1;UBERON:0002171!1.31e-08!1;UBERON:0006518!1.31e-08!1;UBERON:0008949!1.31e-08!1;UBERON:0000101!1.31e-08!1;UBERON:0002167!1.31e-08!1;UBERON:0001154!1.88e-08!1;UBERON:0001153!1.88e-08!1;UBERON:0001736!2.33e-08!1;UBERON:0006298!2.33e-08!1;UBERON:0001764!2.50e-08!1;UBERON:0001825!2.50e-08!1;UBERON:0001301!2.69e-08!1;UBERON:0000166!2.93e-08!21;UBERON:0000989!3.10e-08!1;UBERON:0008811!3.10e-08!1;UBERON:0006258!3.10e-08!1;UBERON:0005876!3.10e-08!1;UBERON:0004874!3.10e-08!1;UBERON:0001007!3.23e-08!155;UBERON:0001555!3.23e-08!155;UBERON:0007026!3.23e-08!155;UBERON:0000998!3.33e-08!1;UBERON:0006868!3.33e-08!1;UBERON:0007190!5.82e-08!1;UBERON:0002372!6.24e-08!1;UBERON:0001961!6.24e-08!1;UBERON:0001744!6.24e-08!1;UBERON:0001735!6.24e-08!1;UBERON:0005904!7.70e-08!4;UBERON:0002370!1.33e-07!4;UBERON:0005058!1.33e-07!4;UBERON:0009113!1.33e-07!4;UBERON:0003295!1.33e-07!4;UBERON:0005562!1.33e-07!4;UBERON:0004119!2.73e-07!169;UBERON:0000925!2.73e-07!169;UBERON:0006595!2.73e-07!169;UBERON:0000466!6.91e-07!126;UBERON:0003104!8.87e-07!238;UBERON:0009142!8.87e-07!238|ontology_enrichment_uberon_v019=UBERON:0001829;5.25e-26;2!UBERON:0001044;2.07e-19;6!UBERON:0003293;2.07e-19;6!UBERON:0003294;2.07e-19;6!UBERON:0010047;2.07e-19;6!UBERON:0003408;2.07e-19;6!UBERON:0000167;2.07e-19;6!UBERON:0001831;3.08e-14;1!UBERON:0001567;3.08e-14;1!UBERON:0002171;5.15e-14;1!UBERON:0006518;5.15e-14;1!UBERON:0008949;5.15e-14;1!UBERON:0000101;5.15e-14;1!UBERON:0002167;5.15e-14;1!UBERON:0001154;9.73e-14;1!UBERON:0001153;9.73e-14;1!UBERON:0009854;9.73e-14;1!UBERON:0001736;1.42e-13;1!UBERON:0001301;1.83e-13;1!UBERON:0001764;1.83e-13;1!UBERON:0001825;1.83e-13;1!UBERON:0001041;1.18e-08;14!UBERON:0004089;9.25e-08;2!UBERON:0003127;9.87e-08;2!UBERON:0000341;1.45e-07;2!UBERON:0000165;1.94e-07;28|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.25e-26,2;UBERON:0001044,2.07e-19,6;UBERON:0003293,2.07e-19,6;UBERON:0003294,2.07e-19,6;UBERON:0010047,2.07e-19,6;UBERON:0000167,2.07e-19,6;UBERON:0007023,2.71e-14,114;UBERON:0001831,3.08e-14,1;UBERON:0001567,3.08e-14,1;UBERON:0008801,3.08e-14,1;UBERON:0002171,5.15e-14,1;UBERON:0006518,5.15e-14,1;UBERON:0008949,5.15e-14,1;UBERON:0000101,5.15e-14,1;UBERON:0002167,5.15e-14,1;UBERON:0001154,9.73e-14,1;UBERON:0001153,9.73e-14,1;UBERON:0001045,9.73e-14,1;UBERON:0001736,1.42e-13,1;UBERON:0006298,1.42e-13,1;UBERON:0001764,1.61e-13,1;UBERON:0001825,1.61e-13,1;UBERON:0001301,1.83e-13,1;UBERON:0003408,6.74e-12,10;UBERON:0001004,4.74e-10,74;UBERON:0000166,2.05e-09,22;UBERON:0004089,9.25e-08,2;UBERON:0003127,9.87e-08,2;UBERON:0000341,1.45e-07,2;UBERON:0000165,3.46e-07,29;UBERON:0000930,3.46e-07,29;UBERON:0000153,6.42e-07,62;UBERON:0007811,6.42e-07,62|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.913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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9340 | |||
|TSSclassifier=S | |||
|UniProt=E9PAL0,E7EXA8,P10163 | |||
|association_with_transcript=0bp_to_ENST00000279575,ENST00000445719,ENST00000535904,NM_002723,uc001qzf.1,uc001qzt.2_5end | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_1_at_PRB4_5end | |||
|id=chr12:11463353..11463372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.70e-26;2!UBERON:0008801;3.08e-14;1!UBERON:0001045;9.73e-14;1!UBERON:0006298;1.42e-13;1!UBERON:0004872;4.75e-08;7!UBERON:0008814;1.12e-07;2!UBERON:0010056;1.12e-07;2!UBERON:0007297;2.25e-07;2 | |||
|ontology_enrichment_disease=DOID:0050619!2.50e-08!1;DOID:1357!2.50e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.83e-13;1!DOID:1357;1.83e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.61e-13,1;DOID:1357,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-18!115;UBERON:0003408!2.67e-17!10;UBERON:0001829!2.20e-15!2;UBERON:0004177!2.22e-15!7;UBERON:0000341!5.52e-15!2;UBERON:0001004!6.70e-14!72;UBERON:0001041!6.43e-13!98;UBERON:0001044!2.30e-11!6;UBERON:0003293!2.30e-11!6;UBERON:0003294!2.30e-11!6;UBERON:0010047!2.30e-11!6;UBERON:0000167!2.30e-11!6;UBERON:0000974!3.87e-11!10;UBERON:0001042!4.30e-11!10;UBERON:0009145!4.30e-11!10;UBERON:0000077!1.78e-10!130;UBERON:0004921!1.78e-10!129;UBERON:0004185!1.78e-10!129;UBERON:0006947!3.58e-10!3;UBERON:0004054!3.58e-10!3;UBERON:0006562!4.25e-10!11;UBERON:0002106!9.36e-10!3;UBERON:0004854!9.36e-10!3;UBERON:0009034!9.36e-10!3;UBERON:0002095!9.36e-10!3;UBERON:0004782!9.36e-10!3;UBERON:0003281!9.36e-10!3;UBERON:0009664!9.36e-10!3;UBERON:0002296!9.36e-10!3;UBERON:0005602!9.36e-10!3;UBERON:0001179!9.36e-10!3;UBERON:0006293!9.36e-10!3;UBERON:0000078!1.12e-09!18;UBERON:0000065!3.50e-09!53;UBERON:0000464!7.57e-09!104;UBERON:0001557!8.99e-09!19;UBERON:0001831!9.79e-09!1;UBERON:0001567!9.79e-09!1;UBERON:0008801!9.79e-09!1;UBERON:0002171!1.31e-08!1;UBERON:0006518!1.31e-08!1;UBERON:0008949!1.31e-08!1;UBERON:0000101!1.31e-08!1;UBERON:0002167!1.31e-08!1;UBERON:0001154!1.88e-08!1;UBERON:0001153!1.88e-08!1;UBERON:0001736!2.33e-08!1;UBERON:0006298!2.33e-08!1;UBERON:0001764!2.50e-08!1;UBERON:0001825!2.50e-08!1;UBERON:0001301!2.69e-08!1;UBERON:0000166!2.93e-08!21;UBERON:0000989!3.10e-08!1;UBERON:0008811!3.10e-08!1;UBERON:0006258!3.10e-08!1;UBERON:0005876!3.10e-08!1;UBERON:0004874!3.10e-08!1;UBERON:0001007!3.23e-08!155;UBERON:0001555!3.23e-08!155;UBERON:0007026!3.23e-08!155;UBERON:0000998!3.33e-08!1;UBERON:0006868!3.33e-08!1;UBERON:0007190!5.82e-08!1;UBERON:0002372!6.24e-08!1;UBERON:0001961!6.24e-08!1;UBERON:0001744!6.24e-08!1;UBERON:0001735!6.24e-08!1;UBERON:0005904!7.70e-08!4;UBERON:0002370!1.33e-07!4;UBERON:0005058!1.33e-07!4;UBERON:0009113!1.33e-07!4;UBERON:0003295!1.33e-07!4;UBERON:0005562!1.33e-07!4;UBERON:0004119!2.73e-07!169;UBERON:0000925!2.73e-07!169;UBERON:0006595!2.73e-07!169;UBERON:0000466!6.91e-07!126;UBERON:0003104!8.87e-07!238;UBERON:0009142!8.87e-07!238 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.25e-26,2;UBERON:0001044,2.07e-19,6;UBERON:0003293,2.07e-19,6;UBERON:0003294,2.07e-19,6;UBERON:0010047,2.07e-19,6;UBERON:0000167,2.07e-19,6;UBERON:0007023,2.71e-14,114;UBERON:0001831,3.08e-14,1;UBERON:0001567,3.08e-14,1;UBERON:0008801,3.08e-14,1;UBERON:0002171,5.15e-14,1;UBERON:0006518,5.15e-14,1;UBERON:0008949,5.15e-14,1;UBERON:0000101,5.15e-14,1;UBERON:0002167,5.15e-14,1;UBERON:0001154,9.73e-14,1;UBERON:0001153,9.73e-14,1;UBERON:0001045,9.73e-14,1;UBERON:0001736,1.42e-13,1;UBERON:0006298,1.42e-13,1;UBERON:0001764,1.61e-13,1;UBERON:0001825,1.61e-13,1;UBERON:0001301,1.83e-13,1;UBERON:0003408,6.74e-12,10;UBERON:0001004,4.74e-10,74;UBERON:0000166,2.05e-09,22;UBERON:0004089,9.25e-08,2;UBERON:0003127,9.87e-08,2;UBERON:0000341,1.45e-07,2;UBERON:0000165,3.46e-07,29;UBERON:0000930,3.46e-07,29;UBERON:0000153,6.42e-07,62;UBERON:0007811,6.42e-07,62 | |||
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|short_description=p1@PRB4 | |||
}} |
Revision as of 21:02, 10 September 2013
Short description: | p1@PRB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRB4_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 0bp_to_ENST00000279575, ENST00000445719, ENST00000535904, NM_002723, uc001qzf.1, uc001qzt.2_5end |
EntrezGene: | PRB4 |
HGNC: | 9340 |
UniProt: | E9PAL0E7EXA8P10163 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.25e-26 | 2 |
saliva-secreting gland | 2.07e-19 | 6 |
gland of oral region | 2.07e-19 | 6 |
gland of foregut | 2.07e-19 | 6 |
oral gland | 2.07e-19 | 6 |
oral cavity | 2.07e-19 | 6 |
adult organism | 2.71e-14 | 114 |
parotid gland | 3.08e-14 | 1 |
cheek | 3.08e-14 | 1 |
parotid gland primordium | 3.08e-14 | 1 |
lower lobe of right lung | 5.15e-14 | 1 |
right lung lobe | 5.15e-14 | 1 |
lower lobe of lung | 5.15e-14 | 1 |
lobe of lung | 5.15e-14 | 1 |
right lung | 5.15e-14 | 1 |
vermiform appendix | 9.73e-14 | 1 |
caecum | 9.73e-14 | 1 |
midgut | 9.73e-14 | 1 |
submandibular gland | 1.42e-13 | 1 |
submandibular gland primordium | 1.42e-13 | 1 |
maxillary sinus | 1.61e-13 | 1 |
paranasal sinus | 1.61e-13 | 1 |
epididymis | 1.83e-13 | 1 |
gland of gut | 6.74e-12 | 10 |
respiratory system | 4.74e-10 | 74 |
oral opening | 2.05e-09 | 22 |
midface | 9.25e-08 | 2 |
open tracheal system trachea | 9.87e-08 | 2 |
throat | 1.45e-07 | 2 |
mouth | 3.46e-07 | 29 |
stomodeum | 3.46e-07 | 29 |
anterior region of body | 6.42e-07 | 62 |
craniocervical region | 6.42e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.61e-13 | 1 |
maxillary sinus cancer | 1.61e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.