FFCP PHASE1:Hg19::chr12:54982586..54982628,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5502|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9286|TSSclassifier=W|UniProt=Q13522,E7ENB4|association_with_transcript=-143bp_to_ENST00000257905,ENST00000379690,NM_006741,uc001sgg.2_5end|coexpression_cluster_id=C2217|description=CAGE_peak_3_at_PPP1R1A_5end|id=chr12:54982586..54982628,-|ontology_enrichment_celltype=CL:0000136!9.26e-14!15|ontology_enrichment_celltype_v019=CL:0000136;6.45e-25;13!CL:0002521;1.13e-10;3|ontology_enrichment_celltype_v019_2=CL:0000136,3.47e-21,15;CL:0002521,1.50e-10,3|ontology_enrichment_development_v019=UBERON:0005062;6.46e-08;4!UBERON:0007284;6.46e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;2.51e-08;10!DOID:114;1.28e-07;2|ontology_enrichment_disease_v019_2=DOID:171,2.13e-08,10;DOID:114,7.88e-08,2|ontology_enrichment_uberon=UBERON:0007023!2.88e-46!115;UBERON:0002346!4.53e-19!90;UBERON:0001049!9.59e-19!57;UBERON:0005068!9.59e-19!57;UBERON:0006241!9.59e-19!57;UBERON:0007135!9.59e-19!57;UBERON:0002616!8.90e-18!59;UBERON:0001017!1.07e-17!82;UBERON:0001893!1.36e-17!34;UBERON:0002020!1.79e-17!34;UBERON:0003528!1.79e-17!34;UBERON:0001950!4.04e-17!20;UBERON:0002619!4.41e-17!22;UBERON:0000955!6.31e-17!69;UBERON:0006238!6.31e-17!69;UBERON:0003075!1.13e-16!86;UBERON:0007284!1.13e-16!86;UBERON:0002791!1.67e-16!33;UBERON:0005743!2.45e-16!86;UBERON:0001869!4.74e-16!32;UBERON:0000073!7.76e-16!94;UBERON:0001016!7.76e-16!94;UBERON:0003080!9.61e-16!42;UBERON:0002780!1.25e-14!41;UBERON:0001890!1.25e-14!41;UBERON:0006240!1.25e-14!41;UBERON:0000956!1.79e-14!25;UBERON:0000203!1.79e-14!25;UBERON:0000924!1.53e-12!173;UBERON:0006601!1.53e-12!173;UBERON:0000153!2.99e-11!129;UBERON:0007811!2.99e-11!129;UBERON:0003056!3.03e-11!61;UBERON:0004121!6.76e-11!169;UBERON:0000033!8.71e-11!123;UBERON:0002021!1.30e-07!5|ontology_enrichment_uberon_v019=UBERON:0001950;6.55e-11;20!UBERON:0004151;7.95e-11;3!UBERON:0002190;1.13e-10;3!UBERON:0003978;2.05e-10;3!UBERON:0000946;2.05e-10;3!UBERON:0002619;8.06e-10;22!UBERON:0007100;2.92e-09;25!UBERON:0000200;1.37e-08;6!UBERON:0000956;1.68e-08;25!UBERON:0000203;1.68e-08;25!UBERON:0002346;1.73e-08;4!UBERON:0000923;1.73e-08;4!UBERON:0010316;1.73e-08;4!UBERON:0005291;1.73e-08;4!UBERON:0002133;1.28e-07;2!UBERON:0002081;1.65e-07;2!UBERON:0002050;7.37e-07;5!UBERON:0005423;7.37e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.07e-17,114;UBERON:0001950,6.21e-11,20;UBERON:0004151,9.43e-11,3;UBERON:0002190,1.50e-10,3;UBERON:0003978,2.55e-10,3;UBERON:0009751,2.55e-10,3;UBERON:0000946,2.55e-10,3;UBERON:0002523,2.55e-10,3;UBERON:0005983,2.55e-10,3;UBERON:0002165,2.55e-10,3;UBERON:0002062,2.55e-10,3;UBERON:0007280,2.55e-10,3;UBERON:0002619,7.67e-10,22;UBERON:0000200,1.34e-08,6;UBERON:0000956,1.61e-08,25;UBERON:0000203,1.61e-08,25;UBERON:0007100,1.62e-08,27;UBERON:0001869,7.17e-08,32;UBERON:0003103,1.15e-07,68;UBERON:0002133,1.40e-07,2;UBERON:0002081,2.02e-07,2;UBERON:0010227,2.02e-07,2;UBERON:0001893,2.57e-07,34;UBERON:0002346,8.41e-07,86|phase1_expression=0.181678379270557,1.92690471501885,0.845726424575827,1.0007329835313,3.12872766099101,0,2.53299878168311,1.26343974685366,3.13422753839806,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.916853528483988,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.464775771478074,0,1.00928340350251,0.72995471815166,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0.541892875087706,1.50506932156456,0,1.66215201785745,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,16.8794941062365,0,0,0,0,0,0,0.394573622547734,0,0,2.90799823828566,1.48428957058962,0,0,0,5.79999660347835,0,0,0,0,2.91604613383254,0,0,0.361789315876224,0,0.663475559587348,0.591095237907095,1.75508317723178,0,0,0.0769502585037971,0,0,0,2.28159481036217,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9286 | |||
|TSSclassifier=W | |||
|UniProt=Q13522,E7ENB4 | |||
|association_with_transcript=-143bp_to_ENST00000257905,ENST00000379690,NM_006741,uc001sgg.2_5end | |||
|coexpression_cluster_id=C2217 | |||
|description=CAGE_peak_3_at_PPP1R1A_5end | |||
|id=chr12:54982586..54982628,- | |||
|ontology_enrichment_celltype=CL:0000136!9.26e-14!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.45e-25;13!CL:0002521;1.13e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.47e-21,15;CL:0002521,1.50e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.46e-08;4!UBERON:0007284;6.46e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.51e-08;10!DOID:114;1.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.13e-08,10;DOID:114,7.88e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-46!115;UBERON:0002346!4.53e-19!90;UBERON:0001049!9.59e-19!57;UBERON:0005068!9.59e-19!57;UBERON:0006241!9.59e-19!57;UBERON:0007135!9.59e-19!57;UBERON:0002616!8.90e-18!59;UBERON:0001017!1.07e-17!82;UBERON:0001893!1.36e-17!34;UBERON:0002020!1.79e-17!34;UBERON:0003528!1.79e-17!34;UBERON:0001950!4.04e-17!20;UBERON:0002619!4.41e-17!22;UBERON:0000955!6.31e-17!69;UBERON:0006238!6.31e-17!69;UBERON:0003075!1.13e-16!86;UBERON:0007284!1.13e-16!86;UBERON:0002791!1.67e-16!33;UBERON:0005743!2.45e-16!86;UBERON:0001869!4.74e-16!32;UBERON:0000073!7.76e-16!94;UBERON:0001016!7.76e-16!94;UBERON:0003080!9.61e-16!42;UBERON:0002780!1.25e-14!41;UBERON:0001890!1.25e-14!41;UBERON:0006240!1.25e-14!41;UBERON:0000956!1.79e-14!25;UBERON:0000203!1.79e-14!25;UBERON:0000924!1.53e-12!173;UBERON:0006601!1.53e-12!173;UBERON:0000153!2.99e-11!129;UBERON:0007811!2.99e-11!129;UBERON:0003056!3.03e-11!61;UBERON:0004121!6.76e-11!169;UBERON:0000033!8.71e-11!123;UBERON:0002021!1.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.55e-11;20!UBERON:0004151;7.95e-11;3!UBERON:0002190;1.13e-10;3!UBERON:0003978;2.05e-10;3!UBERON:0000946;2.05e-10;3!UBERON:0002619;8.06e-10;22!UBERON:0007100;2.92e-09;25!UBERON:0000200;1.37e-08;6!UBERON:0000956;1.68e-08;25!UBERON:0000203;1.68e-08;25!UBERON:0002346;1.73e-08;4!UBERON:0000923;1.73e-08;4!UBERON:0010316;1.73e-08;4!UBERON:0005291;1.73e-08;4!UBERON:0002133;1.28e-07;2!UBERON:0002081;1.65e-07;2!UBERON:0002050;7.37e-07;5!UBERON:0005423;7.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.07e-17,114;UBERON:0001950,6.21e-11,20;UBERON:0004151,9.43e-11,3;UBERON:0002190,1.50e-10,3;UBERON:0003978,2.55e-10,3;UBERON:0009751,2.55e-10,3;UBERON:0000946,2.55e-10,3;UBERON:0002523,2.55e-10,3;UBERON:0005983,2.55e-10,3;UBERON:0002165,2.55e-10,3;UBERON:0002062,2.55e-10,3;UBERON:0007280,2.55e-10,3;UBERON:0002619,7.67e-10,22;UBERON:0000200,1.34e-08,6;UBERON:0000956,1.61e-08,25;UBERON:0000203,1.61e-08,25;UBERON:0007100,1.62e-08,27;UBERON:0001869,7.17e-08,32;UBERON:0003103,1.15e-07,68;UBERON:0002133,1.40e-07,2;UBERON:0002081,2.02e-07,2;UBERON:0010227,2.02e-07,2;UBERON:0001893,2.57e-07,34;UBERON:0002346,8.41e-07,86 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.845726424575827,1.0007329835313,3.12872766099101,0,2.53299878168311,1.26343974685366,3.13422753839806,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.916853528483988,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.464775771478074,0,1.00928340350251,0.72995471815166,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,4.91413608338813,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0.541892875087706,1.50506932156456,0,1.66215201785745,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,16.8794941062365,0,0,0,0,0,0,0.394573622547734,0,0,2.90799823828566,1.48428957058962,0,0,0,5.79999660347835,0,0,0,0,2.91604613383254,0,0,0.361789315876224,0,0.663475559587348,0.591095237907095,1.75508317723178,0,0,0.0769502585037971,0,0,0,2.28159481036217,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0.949661939338181,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,3.35138881526705,1.3749625440701,1.43574604915363,1.99679000498991,3.43380838509257,7.58782955302367,1.88113722962834,0,0,0,0,0,0,0,0,0.408610218334727,0.321506296930038,0.550157746388935,0,0,0,2.67298049295309,0,7.25012507152623,0.83927341015997,0,0,0,2.1440859791201,5.95882773328889,0,0,0,0,0,0,0,0,0.58620893471233,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,23.3927655448874,20.055191521816,18.6870801825712,16.0657589047804,0,0,0.976210119215705,1.6274820991845,0,0,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0.76872455576384,0,0,1.24432592536558,0,0,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,1.88719130227076,0,4.24331324885063,1.70059936081346,25.9025747301315,2.23457967189298,0,0,0,0,0,0.706521476061055,4.25089728976755,1.59633859057151,0.205116364240755,0.252071696221718,2.76629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.41828927698629,0.781078098613847,1.03343398250592,0.951237152908602,0,0,4.96211178389294,0,0,0,0,0,0,0,0,0,1.22345519358297,1.84163765975977,0,0,0.78493092850514,0,0,0,0,7.6440270061928,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,1.24082554265728,0,0,0,0,2.58971534875158,9.54764103763097,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,1.8357702351547,0.436350690340377,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,3.41174371041569,0.714193294391221,0,0,0,0.190941474834495,0.202117188958219,1.74173398317569,4.10679961302337,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.805095174364105,0 | |||
|short_description=p3@PPP1R1A | |||
}} |
Revision as of 23:25, 10 September 2013
Short description: | p3@PPP1R1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PPP1R1A_5end |
Coexpression cluster: | C2217_mature_skeletal_neuroepithelioma_neuroectodermal_argyrophil_breast_left |
Association with transcript: | -143bp_to_ENST00000257905, ENST00000379690, NM_006741, uc001sgg.2_5end |
EntrezGene: | PPP1R1A |
HGNC: | 9286 |
UniProt: | Q13522E7ENB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.47e-21 | 15 |
subcutaneous fat cell | 1.50e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.07e-17 | 114 |
neocortex | 6.21e-11 | 20 |
cardiac chamber | 9.43e-11 | 3 |
subcutaneous adipose tissue | 1.50e-10 | 3 |
valve | 2.55e-10 | 3 |
cardiac mesenchyme | 2.55e-10 | 3 |
cardial valve | 2.55e-10 | 3 |
tunica intima | 2.55e-10 | 3 |
heart layer | 2.55e-10 | 3 |
endocardium | 2.55e-10 | 3 |
endocardial cushion | 2.55e-10 | 3 |
presumptive endocardium | 2.55e-10 | 3 |
regional part of cerebral cortex | 7.67e-10 | 22 |
gyrus | 1.34e-08 | 6 |
cerebral cortex | 1.61e-08 | 25 |
pallium | 1.61e-08 | 25 |
primary circulatory organ | 1.62e-08 | 27 |
cerebral hemisphere | 7.17e-08 | 32 |
compound organ | 1.15e-07 | 68 |
atrioventricular valve | 1.40e-07 | 2 |
cardiac atrium | 2.02e-07 | 2 |
future cardiac atrium | 2.02e-07 | 2 |
telencephalon | 2.57e-07 | 34 |
neurectoderm | 8.41e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.13e-08 | 10 |
heart disease | 7.88e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.