FFCP PHASE1:Hg19::chr12:68835991..68836013,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000546086_5end|coexpression_cluster_id=C74|description=CAGE_peak_1_at_ENST00000546086_5end|id=chr12:68835991..68836013,-|ontology_enrichment_celltype=CL:0000838!5.07e-16!52;CL:0000542!1.12e-15!53;CL:0000051!1.12e-15!53;CL:0000945!1.20e-09!24;CL:0000826!1.20e-09!24;CL:0002087!5.11e-08!119;CL:0002031!1.37e-07!124|ontology_enrichment_celltype_v019=CL:0000945;5.49e-26;24!CL:0000542;3.55e-13;53|ontology_enrichment_celltype_v019_2=CL:0000945,5.79e-26,24;CL:0000826,5.79e-26,24;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177|ontology_enrichment_development_v019=CL:0000051;3.55e-13;53|ontology_enrichment_disease=DOID:0060058!7.93e-11!10;DOID:630!3.32e-08!1;DOID:0050177!3.32e-08!1;DOID:0050427!3.32e-08!1;DOID:0060060!3.55e-08!1;DOID:0060061!3.55e-08!1;DOID:8691!3.55e-08!1;DOID:2355!6.52e-08!1|ontology_enrichment_disease_v019=DOID:630;4.06e-26;1!DOID:0050177;4.06e-26;1!DOID:0050427;4.06e-26;1!DOID:0060060;8.64e-26;1!DOID:0060061;8.64e-26;1!DOID:8691;8.64e-26;1!DOID:0060058;6.13e-11;10|ontology_enrichment_disease_v019_2=DOID:630,4.61e-26,1;DOID:0050177,4.61e-26,1;DOID:0050427,4.61e-26,1;DOID:0060060,5.93e-26,1;DOID:0060061,5.93e-26,1;DOID:8691,5.93e-26,1;DOID:0060058,5.69e-11,10|ontology_enrichment_uberon=UBERON:0004177!7.52e-09!7;UBERON:0002372!4.99e-08!1;UBERON:0001961!4.99e-08!1;UBERON:0001744!4.99e-08!1;UBERON:0001735!4.99e-08!1;UBERON:0000029!5.70e-08!1;UBERON:0001736!6.10e-08!1;UBERON:0006298!6.10e-08!1;UBERON:0001154!7.97e-08!1;UBERON:0001153!7.97e-08!1;UBERON:0002370!3.90e-07!4;UBERON:0005058!3.90e-07!4;UBERON:0009113!3.90e-07!4;UBERON:0003295!3.90e-07!4;UBERON:0005562!3.90e-07!4|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51501666440576,4.43343183029707,3.14843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,6.27732507851454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.285112449007,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,4.16739039994203|short_description=p1@ENST00000546086}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000546086_5end | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_1_at_ENST00000546086_5end | |||
|id=chr12:68835991..68836013,- | |||
|ontology_enrichment_celltype=CL:0000838!5.07e-16!52;CL:0000542!1.12e-15!53;CL:0000051!1.12e-15!53;CL:0000945!1.20e-09!24;CL:0000826!1.20e-09!24;CL:0002087!5.11e-08!119;CL:0002031!1.37e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.49e-26;24!CL:0000542;3.55e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.79e-26,24;CL:0000826,5.79e-26,24;CL:0000838,2.91e-23,52;CL:0000542,7.94e-23,53;CL:0000051,7.94e-23,53;CL:0002087,1.84e-10,115;CL:0002031,5.00e-10,120;CL:0000738,7.53e-09,136;CL:0002032,1.81e-07,161;CL:0000837,1.81e-07,161;CL:0000037,3.74e-07,168;CL:0000988,8.75e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;3.55e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.93e-11!10;DOID:630!3.32e-08!1;DOID:0050177!3.32e-08!1;DOID:0050427!3.32e-08!1;DOID:0060060!3.55e-08!1;DOID:0060061!3.55e-08!1;DOID:8691!3.55e-08!1;DOID:2355!6.52e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:630;4.06e-26;1!DOID:0050177;4.06e-26;1!DOID:0050427;4.06e-26;1!DOID:0060060;8.64e-26;1!DOID:0060061;8.64e-26;1!DOID:8691;8.64e-26;1!DOID:0060058;6.13e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.61e-26,1;DOID:0050177,4.61e-26,1;DOID:0050427,4.61e-26,1;DOID:0060060,5.93e-26,1;DOID:0060061,5.93e-26,1;DOID:8691,5.93e-26,1;DOID:0060058,5.69e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.52e-09!7;UBERON:0002372!4.99e-08!1;UBERON:0001961!4.99e-08!1;UBERON:0001744!4.99e-08!1;UBERON:0001735!4.99e-08!1;UBERON:0000029!5.70e-08!1;UBERON:0001736!6.10e-08!1;UBERON:0006298!6.10e-08!1;UBERON:0001154!7.97e-08!1;UBERON:0001153!7.97e-08!1;UBERON:0002370!3.90e-07!4;UBERON:0005058!3.90e-07!4;UBERON:0009113!3.90e-07!4;UBERON:0003295!3.90e-07!4;UBERON:0005562!3.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.01e-09,3;UBERON:0004854,1.01e-09,3;UBERON:0009034,1.01e-09,3;UBERON:0002095,1.01e-09,3;UBERON:0004782,1.01e-09,3;UBERON:0003281,1.01e-09,3;UBERON:0009664,1.01e-09,3;UBERON:0002296,1.01e-09,3;UBERON:0005602,1.01e-09,3;UBERON:0001179,1.01e-09,3;UBERON:0006293,1.01e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51501666440576,4.43343183029707,3.14843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,6.27732507851454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15464825135177,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.285112449007,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,4.16739039994203 | |||
|short_description=p1@ENST00000546086 | |||
}} |
Revision as of 00:07, 11 September 2013
Short description: | p1@ENST00000546086 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000546086_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 0bp_to_ENST00000546086_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.79e-26 | 24 |
pro-B cell | 5.79e-26 | 24 |
lymphoid lineage restricted progenitor cell | 2.91e-23 | 52 |
lymphocyte | 7.94e-23 | 53 |
common lymphoid progenitor | 7.94e-23 | 53 |
nongranular leukocyte | 1.84e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.00e-10 | 120 |
leukocyte | 7.53e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-07 | 161 |
hematopoietic stem cell | 3.74e-07 | 168 |
hematopoietic cell | 8.75e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.01e-09 | 3 |
gastrointestinal system mesentery | 1.01e-09 | 3 |
stomach region | 1.01e-09 | 3 |
mesentery | 1.01e-09 | 3 |
gastrointestinal system serosa | 1.01e-09 | 3 |
mesentery of stomach | 1.01e-09 | 3 |
gut mesentery | 1.01e-09 | 3 |
dorsal mesentery | 1.01e-09 | 3 |
dorsal mesogastrium | 1.01e-09 | 3 |
peritoneal cavity | 1.01e-09 | 3 |
spleen primordium | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.61e-26 | 1 |
monogenic disease | 4.61e-26 | 1 |
xeroderma pigmentosum | 4.61e-26 | 1 |
non-Hodgkin lymphoma | 5.93e-26 | 1 |
cutaneous T cell lymphoma | 5.93e-26 | 1 |
mycosis fungoides | 5.93e-26 | 1 |
lymphoma | 5.69e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.