FFCP PHASE1:Hg19::chr12:79371636..79371672,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11509|TSSclassifier=S|UniProt=F8VZY3|association_with_transcript=71bp_to_ENST00000551304_5end|coexpression_cluster_id=C16|description=CAGE_peak_13_at_SYT1_5end|id=chr12:79371636..79371672,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;1.76e-09;1!CL:0000164;1.76e-09;1!CL:0000502;1.76e-09;1!CL:0000172;1.76e-09;1!CL:0000173;1.76e-09;1|ontology_enrichment_celltype_v019_2=CL:0000167,2.16e-09,1;CL:0000164,2.16e-09,1;CL:0000502,2.16e-09,1;CL:0000172,2.16e-09,1;CL:0000173,2.16e-09,1;CL:0002351,2.16e-09,1|ontology_enrichment_development_v019=CL:0002351;1.76e-09;1!UBERON:0006601;3.47e-08;82|ontology_enrichment_disease=DOID:171!4.20e-09!10;DOID:169!1.93e-08!6|ontology_enrichment_disease_v019=DOID:4430;1.76e-09;1|ontology_enrichment_disease_v019_2=DOID:4430,2.16e-09,1|ontology_enrichment_uberon=UBERON:0000073!5.30e-58!94;UBERON:0001016!5.30e-58!94;UBERON:0001017!1.60e-54!82;UBERON:0005743!1.56e-53!86;UBERON:0001049!5.95e-53!57;UBERON:0005068!5.95e-53!57;UBERON:0006241!5.95e-53!57;UBERON:0007135!5.95e-53!57;UBERON:0002780!8.99e-49!41;UBERON:0001890!8.99e-49!41;UBERON:0006240!8.99e-49!41;UBERON:0000955!2.45e-48!69;UBERON:0006238!2.45e-48!69;UBERON:0002616!3.82e-48!59;UBERON:0003080!2.15e-47!42;UBERON:0002020!2.35e-45!34;UBERON:0003528!2.35e-45!34;UBERON:0001869!4.51e-45!32;UBERON:0002346!5.03e-42!90;UBERON:0001893!5.49e-42!34;UBERON:0002619!1.11e-40!22;UBERON:0003075!1.60e-40!86;UBERON:0007284!1.60e-40!86;UBERON:0002791!4.15e-40!33;UBERON:0001950!2.32e-36!20;UBERON:0003056!1.10e-35!61;UBERON:0000956!3.39e-35!25;UBERON:0000203!3.39e-35!25;UBERON:0000924!3.46e-33!173;UBERON:0006601!3.46e-33!173;UBERON:0007023!5.10e-32!115;UBERON:0004121!1.14e-31!169;UBERON:0000033!1.03e-29!123;UBERON:0000153!1.08e-27!129;UBERON:0007811!1.08e-27!129;UBERON:0000200!2.23e-14!6;UBERON:0001871!4.73e-14!7;UBERON:0000349!4.36e-12!5;UBERON:0002021!1.01e-11!5;UBERON:0002420!1.11e-11!9;UBERON:0007245!1.11e-11!9;UBERON:0010009!1.11e-11!9;UBERON:0010011!1.11e-11!9;UBERON:0000454!1.11e-11!9;UBERON:0000025!1.57e-11!194;UBERON:0002308!1.81e-11!9;UBERON:0000125!1.81e-11!9;UBERON:0004111!3.46e-09!241;UBERON:0000477!2.49e-08!286;UBERON:0002771!2.90e-08!3;UBERON:0001894!4.25e-08!7;UBERON:0006222!4.25e-08!7;UBERON:0001872!5.42e-08!5;UBERON:0004733!5.55e-08!12;UBERON:0002028!5.55e-08!12;UBERON:0007277!5.55e-08!12;UBERON:0009663!6.07e-08!7;UBERON:0003076!6.75e-08!15;UBERON:0003057!6.75e-08!15;UBERON:0000483!7.65e-08!309;UBERON:0000475!1.16e-07!365;UBERON:0000922!1.19e-07!612;UBERON:0000119!1.22e-07!312;UBERON:0000064!1.89e-07!219;UBERON:0000988!1.94e-07!3;UBERON:0004732!2.81e-07!13;UBERON:0000923!4.82e-07!604;UBERON:0005291!4.82e-07!604;UBERON:0006598!4.82e-07!604;UBERON:0002532!4.82e-07!604;UBERON:0002050!5.36e-07!605;UBERON:0005423!5.36e-07!605|ontology_enrichment_uberon_v019=UBERON:0002619;3.44e-57;22!UBERON:0000956;2.42e-50;25!UBERON:0000203;2.42e-50;25!UBERON:0002791;8.57e-49;32!UBERON:0001869;8.66e-49;32!UBERON:0001950;5.96e-45;20!UBERON:0001893;7.38e-44;34!UBERON:0003528;7.02e-42;34!UBERON:0002020;7.02e-42;34!UBERON:0002780;1.54e-40;41!UBERON:0001890;1.54e-40;41!UBERON:0000073;1.39e-28;53!UBERON:0002616;1.39e-28;53!UBERON:0000349;1.48e-25;5!UBERON:0000955;3.20e-24;68!UBERON:0000200;2.30e-22;6!UBERON:0001017;1.79e-21;75!UBERON:0001871;1.29e-18;6!UBERON:0002784;3.63e-18;4!UBERON:0002702;1.21e-17;2!UBERON:0002771;1.43e-17;2!UBERON:0001954;4.49e-17;2!UBERON:0003022;4.49e-17;2!UBERON:0002421;4.49e-17;2!UBERON:0002600;4.49e-17;2!UBERON:0001905;1.33e-16;2!UBERON:0002757;1.33e-16;2!UBERON:0010134;1.33e-16;2!UBERON:0005408;1.33e-16;2!UBERON:0001899;1.33e-16;2!UBERON:0002021;3.32e-15;5!UBERON:0001870;4.47e-12;3!UBERON:0001016;6.94e-12;83!UBERON:0001894;1.25e-10;7!UBERON:0003112;1.76e-09;1!UBERON:0011158;1.76e-09;1!UBERON:0003128;1.76e-09;1!UBERON:0001703;1.76e-09;1!UBERON:0002241;1.76e-09;1!UBERON:0001882;3.67e-09;1!UBERON:0001874;3.67e-09;1!UBERON:0005403;3.67e-09;1!UBERON:0000369;9.24e-09;4!UBERON:0002435;9.24e-09;4!UBERON:0003296;9.24e-09;4!UBERON:0010133;9.24e-09;4!UBERON:0000204;9.24e-09;4!UBERON:0011216;1.26e-08;132!UBERON:0002420;2.23e-08;9!UBERON:0007245;2.23e-08;9!UBERON:0010009;2.23e-08;9!UBERON:0010011;2.23e-08;9!UBERON:0000454;2.23e-08;9!UBERON:0007023;4.26e-08;114!UBERON:0001872;1.39e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.62e-58,41;UBERON:0001890,1.62e-58,41;UBERON:0003080,1.62e-58,41;UBERON:0006240,1.62e-58,41;UBERON:0002619,2.39e-57,22;UBERON:0002791,3.09e-52,32;UBERON:0001869,3.09e-52,32;UBERON:0000956,1.76e-50,25;UBERON:0000203,1.76e-50,25;UBERON:0000073,4.25e-50,53;UBERON:0002616,4.25e-50,53;UBERON:0003528,4.18e-49,34;UBERON:0002020,4.18e-49,34;UBERON:0001893,4.18e-49,34;UBERON:0001049,2.70e-47,56;UBERON:0005068,2.70e-47,56;UBERON:0006241,2.70e-47,56;UBERON:0007135,2.70e-47,56;UBERON:0000955,6.98e-47,68;UBERON:0006238,6.98e-47,68;UBERON:0001950,5.15e-45,20;UBERON:0001017,5.45e-43,8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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |||
|TSSclassifier=S | |||
|UniProt=F8VZY3 | |||
|association_with_transcript=71bp_to_ENST00000551304_5end | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_13_at_SYT1_5end | |||
|id=chr12:79371636..79371672,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.76e-09;1!CL:0000164;1.76e-09;1!CL:0000502;1.76e-09;1!CL:0000172;1.76e-09;1!CL:0000173;1.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.16e-09,1;CL:0000164,2.16e-09,1;CL:0000502,2.16e-09,1;CL:0000172,2.16e-09,1;CL:0000173,2.16e-09,1;CL:0002351,2.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.76e-09;1!UBERON:0006601;3.47e-08;82 | |||
|ontology_enrichment_disease=DOID:171!4.20e-09!10;DOID:169!1.93e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.76e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.16e-09,1 | |||
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|short_description=p13@SYT1 | |||
}} |
Revision as of 00:34, 11 September 2013
Short description: | p13@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SYT1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 71bp_to_ENST00000551304_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VZY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.16e-09 | 1 |
enteroendocrine cell | 2.16e-09 | 1 |
type D enteroendocrine cell | 2.16e-09 | 1 |
somatostatin secreting cell | 2.16e-09 | 1 |
pancreatic D cell | 2.16e-09 | 1 |
progenitor cell of endocrine pancreas | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.16e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.