FFCP PHASE1:Hg19::chr12:89919220..89919247,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=282809|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30836|TSSclassifier=S|UniProt=|association_with_transcript=-28bp_to_ENST00000552563_5end|description=CAGE_peak_5_at_POC1B_5end|id=chr12:89919220..89919247,-|ontology_enrichment_celltype=CL:0000542!2.87e-07!53;CL:0000051!2.87e-07!53;CL:0000838!5.72e-07!52|ontology_enrichment_celltype_v019=CL:0000084;5.15e-07;25|ontology_enrichment_celltype_v019_2=CL:0000542,1.47e-07,53;CL:0000051,1.47e-07,53;CL:0000838,4.65e-07,52;CL:0000084,4.68e-07,25;CL:0000827,4.68e-07,25|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.72e-10!115|ontology_enrichment_uberon_v019=UBERON:0000178;5.36e-09;15!UBERON:0000179;5.36e-09;15!UBERON:0000463;5.36e-09;15!UBERON:0005409;1.52e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.31e-09,15;UBERON:0000179,6.31e-09,15;UBERON:0000463,6.31e-09,15;UBERON:0007023,6.56e-09,114;UBERON:0005409,8.13e-08,25|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,1.46062018077475,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0.458480434487708,0.328402357799783,0.314843125254717,0.393364276848904,1.15148819429164,1.08371286321253,0.919421224478927,0.30120591877825,1.10926203050036,0.154934401160603,0.853015394924529,0.587200878669695,1.10799081706375,0.401088894940283,0.651032612147555,1.11957737119962,0.647787332037959,1.03030227053675,0.145398238779565,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0.575384784644301,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0.628975936525128,0.336985893439485,0.150176892841506,0.48217676009124,0,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.853460445133014,1.60158394814405,0.574752439954483,1.32208974556972,2.86216126360609,1.1384259382189,2.34894875748376,0.382273228125229,0,0,0,1.180258620683,0.393010762749165,1.02800749499755,0.167186495390678,0.651844533267181,0.946895611469467,0,1.11410456885174,0,0.886135578334485,0.812411591295047,1.40900451698243,1.30059347559878,3.28875809207352,2.48715016007264,1.15921234294021,0.593146252648242,0.267540828089713,0,1.81294948316106,0.383220493601921,0.34362744548263,0.759059076058509,1.27426165729639,1.30216690771284,3.8018081777935,0.903450714466637,1.15187950038977,1.24930726552346,1.18388626022008,1.64225599384209,0.80642697289893,0.802320587350522,0.144824403882799,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0.728590576585084,0.370784442784429,0.97364218096405,0.174129737299267,0.664789802594326,0.715471872916026,0.571994910780128,0.371457501329565,0.596287222100115,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0.516833518338658,1.06729878806013,0,0,0.760272105718513,0,0.367663080345869,0,0.446498641420399,0,0.225222960966644,0,0.949265659568129,0.183201743930407,2.63560834872127,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.538842688278752,0.326923806226917,0.151357427644931,0.576175924479999,0,0.624320153660641,0.570471821544449,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0.408308342509787,0.122834317311768,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.505008341862199,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.340296549480063,0.358779271377724,0.85422955527427,0.211931901159562,0.300091096084402,0.206105058476878,0,0.744467425326359,0.168776332241266,0.292311015483596,0.504867548488229,0.0920498986422993,0.484938170456436,0.355009592516614,0.302256294682921,0.169560592310488,0.966304265816484,1.36373060295417,1.72082757233402,0.365921118388786,0.265059536642971,0.348581828608555,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0.343135620597051,1.09750285408626,0,0.703702806881416,1.29623823221941,0,0,1.44331342025273,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,2.37061319387782,0.858486162094873,0.246217006087397,0.468008530278475,0.743155811443641,0,1.00789276919316,0.708875486211932,1.52249488594842,0.871901815541886,0.766765358330422,0.492663237895943,0.264145302039678,0.414656231081544,1.00883967391873,1.13618190083742,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0.300343057843917,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=282809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30836 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_ENST00000552563_5end | |||
|description=CAGE_peak_5_at_POC1B_5end | |||
|id=chr12:89919220..89919247,- | |||
|ontology_enrichment_celltype=CL:0000542!2.87e-07!53;CL:0000051!2.87e-07!53;CL:0000838!5.72e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.15e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.47e-07,53;CL:0000051,1.47e-07,53;CL:0000838,4.65e-07,52;CL:0000084,4.68e-07,25;CL:0000827,4.68e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.72e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.36e-09;15!UBERON:0000179;5.36e-09;15!UBERON:0000463;5.36e-09;15!UBERON:0005409;1.52e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.31e-09,15;UBERON:0000179,6.31e-09,15;UBERON:0000463,6.31e-09,15;UBERON:0007023,6.56e-09,114;UBERON:0005409,8.13e-08,25 | |||
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| |||
|short_description=p5@POC1B | |||
}} |
Revision as of 00:50, 11 September 2013
Short description: | p5@POC1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_POC1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000552563_5end |
EntrezGene: | POC1B |
HGNC: | 30836 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.47e-07 | 53 |
common lymphoid progenitor | 1.47e-07 | 53 |
lymphoid lineage restricted progenitor cell | 4.65e-07 | 52 |
T cell | 4.68e-07 | 25 |
pro-T cell | 4.68e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 6.31e-09 | 15 |
haemolymphatic fluid | 6.31e-09 | 15 |
organism substance | 6.31e-09 | 15 |
adult organism | 6.56e-09 | 114 |
gastrointestinal system | 8.13e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.