FFCP PHASE1:Hg19::chr12:113344736..113344745,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4938|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8086|TSSclassifier=S|UniProt=P00973|association_with_transcript=0bp_to_NM_001032409,NM_002534,NM_016816,uc001tub.2,uc001tuc.2,uc001tud.2,uc009zwf.2,uc010syn.1,uc010syo.1_5end|description=CAGE_peak_3_at_OAS1_5end|id=chr12:113344736..113344745,+|ontology_enrichment_celltype=CL:0000860!2.15e-08!45;CL:0002057!7.95e-07!42|ontology_enrichment_celltype_v019=CL:0000875;1.93e-08;3!CL:0002396;1.93e-08;3|ontology_enrichment_celltype_v019_2=CL:0000875,6.12e-09,3;CL:0002396,6.12e-09,3|ontology_enrichment_development_v019=UBERON:0008947;5.32e-14;29|ontology_enrichment_disease=DOID:305!1.44e-09!106;DOID:0050687!3.36e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,5.14e-16,106;DOID:0050687,9.45e-14,143;DOID:162,1.25e-10,235;DOID:14566,3.41e-10,239|ontology_enrichment_uberon=UBERON:0001737!1.96e-08!9|ontology_enrichment_uberon_v019=UBERON:0001737;7.08e-25;9!UBERON:0001557;7.08e-25;9!UBERON:0000072;2.54e-09;37!UBERON:0000065;4.18e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.71e-25,9;UBERON:0001557,6.00e-11,19;UBERON:0008947,4.79e-10,38;UBERON:0003258,4.79e-10,38;UBERON:0000072,1.55e-07,47|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,2.61185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.903106483949403,0.865818594450472,0.393364276848904,0.383829398097213,0.928896739896456,0,0.6024118375565,0,0.0774672005803016,0.142169232487422,1.17440175733939,0,1.00272223735071,0,0.223915474239924,0.32389366601898,0,0.436194716338694,0.755751887377619,0,0,0.822335776043652,0,2.3015391385772,0.256160706529101,0.945928919554341,1.03423704220986,0,0,0.188242339542605,0.545812300115692,0.449446968890169,0.306083892370903,0.962787081228281,0,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,1.47311054395026,0.949387162322653,0.211255286311942,0.212604299965044,0.419317291016752,0.561643155732475,0.750884464207532,0.64290234678832,1.71007646244749,1.79025009479181,1.64397738388171,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.946895611469467,0,0.557052284425868,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.390178042679635,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,0,0,0.722878304769133,0,1.15877215168659,0,0.486634870302636,0,0,0,0.261958150995425,0,0.741568885568859,0,0.348259474598534,0,0.476981248610684,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.732186172644509,0.367663080345869,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0.386521706326594,0.272746120590835,0.573609190778008,0,0.132529768321485,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,2.24782920075703,1.51726221070292,2.41011029883482,2.42646740011267,1.96091499683166,3.32178866755535,2.96628877952362,2.35465758150415,2.30848294167834,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.548751427043128,0,0.904760751704678,0.277765335475589,0.325808305310325,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,1.71697232418975,0.246217006087397,0.936017060556951,0.148631162288728,0,0.839910640994298,0.850650583454319,0.0895585227028483,0,0,0,0.44024217006613,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0.763976851116555,4.68869788840188,0,0,0.600686115687835,0.571652865261156,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0.410952645100767,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0,0.328508624055237,0.519254429183621,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,4.00443654228915,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,2.19342140668156,0,0,0,0,0,0,1.75380354101505,0,0,0,0,0,0,0,0,0,1.68886108238131,0.987884678879706,0,0,0.384888450902048,0.6703022755357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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4938 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8086 | |||
|TSSclassifier=S | |||
|UniProt=P00973 | |||
|association_with_transcript=0bp_to_NM_001032409,NM_002534,NM_016816,uc001tub.2,uc001tuc.2,uc001tud.2,uc009zwf.2,uc010syn.1,uc010syo.1_5end | |||
|description=CAGE_peak_3_at_OAS1_5end | |||
|id=chr12:113344736..113344745,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.15e-08!45;CL:0002057!7.95e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.93e-08;3!CL:0002396;1.93e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,6.12e-09,3;CL:0002396,6.12e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.32e-14;29 | |||
|ontology_enrichment_disease=DOID:305!1.44e-09!106;DOID:0050687!3.36e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.14e-16,106;DOID:0050687,9.45e-14,143;DOID:162,1.25e-10,235;DOID:14566,3.41e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.96e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.08e-25;9!UBERON:0001557;7.08e-25;9!UBERON:0000072;2.54e-09;37!UBERON:0000065;4.18e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.71e-25,9;UBERON:0001557,6.00e-11,19;UBERON:0008947,4.79e-10,38;UBERON:0003258,4.79e-10,38;UBERON:0000072,1.55e-07,47 | |||
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| |||
|short_description=p3@OAS1 | |||
}} |
Revision as of 20:57, 10 September 2013
Short description: | p3@OAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_OAS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001032409, NM_002534, NM_016816, uc001tub.2, uc001tuc.2, uc001tud.2, uc009zwf.2, uc010syn.1, uc010syo.1_5end |
EntrezGene: | OAS1 |
HGNC: | 8086 |
UniProt: | P00973 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 6.12e-09 | 3 |
CD14-low, CD16-positive monocyte | 6.12e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.71e-25 | 9 |
upper respiratory tract | 6.00e-11 | 19 |
respiratory primordium | 4.79e-10 | 38 |
endoderm of foregut | 4.79e-10 | 38 |
segment of respiratory tract | 1.55e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.14e-16 | 106 |
cell type cancer | 9.45e-14 | 143 |
cancer | 1.25e-10 | 235 |
disease of cellular proliferation | 3.41e-10 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.