FFCP PHASE1:Hg19::chr12:122369712..122369733,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:122369712..122369733,+|id=chr12:122369712..122369733,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;9.90e-19;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.42e-11!115;UBERON:0000341!1.12e-08!2;UBERON:0002046!4.09e-08!5;UBERON:0004117!4.09e-08!5;UBERON:0007689!4.09e-08!5;UBERON:0007123!4.09e-08!5;UBERON:0003091!4.09e-08!5;UBERON:0005172!6.82e-07!55;UBERON:0005173!6.82e-07!55;UBERON:0005057!7.03e-07!26|ontology_enrichment_uberon_v019=UBERON:0006834;4.59e-23;1!UBERON:0002046;9.90e-19;5!UBERON:0002368;1.96e-10;33!UBERON:0002106;1.35e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.28e-23,1;UBERON:0002046,1.04e-18,5;UBERON:0004117,1.04e-18,5;UBERON:0007689,1.04e-18,5;UBERON:0007123,1.04e-18,5;UBERON:0003091,1.04e-18,5;UBERON:0002368,1.43e-10,35;UBERON:0009722,4.80e-09,11;UBERON:0007690,4.80e-09,11;UBERON:0002106,1.30e-08,3;UBERON:0004854,1.30e-08,3;UBERON:0009034,1.30e-08,3;UBERON:0002095,1.30e-08,3;UBERON:0004782,1.30e-08,3;UBERON:0003281,1.30e-08,3;UBERON:0009664,1.30e-08,3;UBERON:0002296,1.30e-08,3;UBERON:0005602,1.30e-08,3;UBERON:0001179,1.30e-08,3;UBERON:0006293,1.30e-08,3;UBERON:0000949,2.67e-08,45;UBERON:0003929,5.73e-07,54;UBERON:0005172,6.01e-07,54;UBERON:0005173,6.01e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,4.34103949589333,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,3.09482069996489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.939839179798536,1.48253142339228,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,2.48223917284843,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,1.71138021856013,0.406896178315738,0,0,0|short_description=p@chr12:122369712..122369733,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:122369712..122369733,+ | |||
|id=chr12:122369712..122369733,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.90e-19;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-11!115;UBERON:0000341!1.12e-08!2;UBERON:0002046!4.09e-08!5;UBERON:0004117!4.09e-08!5;UBERON:0007689!4.09e-08!5;UBERON:0007123!4.09e-08!5;UBERON:0003091!4.09e-08!5;UBERON:0005172!6.82e-07!55;UBERON:0005173!6.82e-07!55;UBERON:0005057!7.03e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.59e-23;1!UBERON:0002046;9.90e-19;5!UBERON:0002368;1.96e-10;33!UBERON:0002106;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.28e-23,1;UBERON:0002046,1.04e-18,5;UBERON:0004117,1.04e-18,5;UBERON:0007689,1.04e-18,5;UBERON:0007123,1.04e-18,5;UBERON:0003091,1.04e-18,5;UBERON:0002368,1.43e-10,35;UBERON:0009722,4.80e-09,11;UBERON:0007690,4.80e-09,11;UBERON:0002106,1.30e-08,3;UBERON:0004854,1.30e-08,3;UBERON:0009034,1.30e-08,3;UBERON:0002095,1.30e-08,3;UBERON:0004782,1.30e-08,3;UBERON:0003281,1.30e-08,3;UBERON:0009664,1.30e-08,3;UBERON:0002296,1.30e-08,3;UBERON:0005602,1.30e-08,3;UBERON:0001179,1.30e-08,3;UBERON:0006293,1.30e-08,3;UBERON:0000949,2.67e-08,45;UBERON:0003929,5.73e-07,54;UBERON:0005172,6.01e-07,54;UBERON:0005173,6.01e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,4.34103949589333,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,3.09482069996489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,2.65013777824443,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.939839179798536,1.48253142339228,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,2.48223917284843,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,1.71138021856013,0.406896178315738,0,0,0 | |||
|short_description=p@chr12:122369712..122369733,+ | |||
}} |
Revision as of 21:24, 10 September 2013
Short description: | p@chr12:122369712..122369733, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:122369712..122369733, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.28e-23 | 1 |
thyroid gland | 1.04e-18 | 5 |
pharyngeal pouch | 1.04e-18 | 5 |
thyroid diverticulum | 1.04e-18 | 5 |
pharyngeal pouch 2 | 1.04e-18 | 5 |
thyroid primordium | 1.04e-18 | 5 |
endocrine gland | 1.43e-10 | 35 |
entire pharyngeal arch endoderm | 4.80e-09 | 11 |
early pharyngeal endoderm | 4.80e-09 | 11 |
spleen | 1.30e-08 | 3 |
gastrointestinal system mesentery | 1.30e-08 | 3 |
stomach region | 1.30e-08 | 3 |
mesentery | 1.30e-08 | 3 |
gastrointestinal system serosa | 1.30e-08 | 3 |
mesentery of stomach | 1.30e-08 | 3 |
gut mesentery | 1.30e-08 | 3 |
dorsal mesentery | 1.30e-08 | 3 |
dorsal mesogastrium | 1.30e-08 | 3 |
peritoneal cavity | 1.30e-08 | 3 |
spleen primordium | 1.30e-08 | 3 |
endocrine system | 2.67e-08 | 45 |
gut epithelium | 5.73e-07 | 54 |
abdomen element | 6.01e-07 | 54 |
abdominal segment element | 6.01e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.