FFCP PHASE1:Hg19::chr13:23733194..23733206,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C262|description=CAGE_peak_at_chr13:23733194..23733206,+|id=chr13:23733194..23733206,+|ontology_enrichment_celltype=CL:0000039!3.92e-20!7;CL:0000586!3.92e-20!7|ontology_enrichment_celltype_v019=CL:0000138;1.57e-09;6!CL:0000153;8.85e-07;9!CL:0000447;8.85e-07;9|ontology_enrichment_celltype_v019_2=CL:0000058,1.57e-09,6;CL:0000138,1.57e-09,6;CL:0000153,8.85e-07,9;CL:0000447,8.85e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5093!1.17e-35!4;DOID:1612!1.17e-35!4;DOID:3371!7.57e-17!1;DOID:4549!7.57e-17!1;DOID:5861!7.57e-17!1;DOID:6496!7.57e-17!1;DOID:3095!8.27e-07!22;DOID:2994!8.27e-07!22|ontology_enrichment_disease_v019=DOID:5093;8.91e-111;4!DOID:1612;8.91e-111;4!DOID:3371;6.58e-50;1!DOID:4549;6.58e-50;1!DOID:5861;6.58e-50;1!DOID:6496;6.58e-50;1!DOID:299;1.02e-18;25!DOID:7;6.19e-10;39!DOID:201;1.57e-09;6!DOID:0060100;1.57e-09;6|ontology_enrichment_disease_v019_2=DOID:5093,8.91e-111,4;DOID:1612,8.91e-111,4;DOID:3371,6.58e-50,1;DOID:4549,6.58e-50,1;DOID:5861,6.58e-50,1;DOID:6496,6.58e-50,1;DOID:299,1.02e-18,25;DOID:7,2.38e-12,39;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6|ontology_enrichment_uberon=UBERON:0000473!9.36e-18!8;UBERON:0000310!1.07e-14!10;UBERON:0001443!2.02e-13!11;UBERON:0003135!4.29e-13!11;UBERON:0003127!5.08e-09!2;UBERON:0001870!8.74e-09!2;UBERON:0000991!3.97e-07!21;UBERON:0009196!3.97e-07!21;UBERON:0009117!3.97e-07!21;UBERON:0005564!3.97e-07!21;UBERON:0004176!7.94e-07!22;UBERON:0003101!7.94e-07!22;UBERON:0000079!7.94e-07!22|ontology_enrichment_uberon_v019=UBERON:0000310;4.18e-45;10!UBERON:0001443;4.07e-41;11!UBERON:0002418;1.12e-17;3!UBERON:0004755;1.12e-17;3!UBERON:0000915;2.02e-09;52|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.18e-45,10;UBERON:0001443,4.07e-41,11;UBERON:0002418,1.12e-17,3;UBERON:0004755,1.12e-17,3;UBERON:0000915,1.73e-09,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,6.00940313466411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9085465446433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.588610280447,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.752122617877125,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:23733194..23733206,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C262 | |||
|description=CAGE_peak_at_chr13:23733194..23733206,+ | |||
|id=chr13:23733194..23733206,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.92e-20!7;CL:0000586!3.92e-20!7 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.57e-09;6!CL:0000153;8.85e-07;9!CL:0000447;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.57e-09,6;CL:0000138,1.57e-09,6;CL:0000153,8.85e-07,9;CL:0000447,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.17e-35!4;DOID:1612!1.17e-35!4;DOID:3371!7.57e-17!1;DOID:4549!7.57e-17!1;DOID:5861!7.57e-17!1;DOID:6496!7.57e-17!1;DOID:3095!8.27e-07!22;DOID:2994!8.27e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.91e-111;4!DOID:1612;8.91e-111;4!DOID:3371;6.58e-50;1!DOID:4549;6.58e-50;1!DOID:5861;6.58e-50;1!DOID:6496;6.58e-50;1!DOID:299;1.02e-18;25!DOID:7;6.19e-10;39!DOID:201;1.57e-09;6!DOID:0060100;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.91e-111,4;DOID:1612,8.91e-111,4;DOID:3371,6.58e-50,1;DOID:4549,6.58e-50,1;DOID:5861,6.58e-50,1;DOID:6496,6.58e-50,1;DOID:299,1.02e-18,25;DOID:7,2.38e-12,39;DOID:201,1.57e-09,6;DOID:0060100,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.36e-18!8;UBERON:0000310!1.07e-14!10;UBERON:0001443!2.02e-13!11;UBERON:0003135!4.29e-13!11;UBERON:0003127!5.08e-09!2;UBERON:0001870!8.74e-09!2;UBERON:0000991!3.97e-07!21;UBERON:0009196!3.97e-07!21;UBERON:0009117!3.97e-07!21;UBERON:0005564!3.97e-07!21;UBERON:0004176!7.94e-07!22;UBERON:0003101!7.94e-07!22;UBERON:0000079!7.94e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.18e-45;10!UBERON:0001443;4.07e-41;11!UBERON:0002418;1.12e-17;3!UBERON:0004755;1.12e-17;3!UBERON:0000915;2.02e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,4.18e-45,10;UBERON:0001443,4.07e-41,11;UBERON:0002418,1.12e-17,3;UBERON:0004755,1.12e-17,3;UBERON:0000915,1.73e-09,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53143078571493,6.00940313466411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9085465446433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.588610280447,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.752122617877125,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:23733194..23733206,+ | |||
}} |
Revision as of 01:46, 11 September 2013
Short description: | p@chr13:23733194..23733206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23733194..23733206, + |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.57e-09 | 6 |
chondrocyte | 1.57e-09 | 6 |
GAG secreting cell | 8.85e-07 | 9 |
carbohydrate secreting cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
breast | 4.18e-45 | 10 |
chest | 4.07e-41 | 11 |
cartilage tissue | 1.12e-17 | 3 |
skeletal tissue | 1.12e-17 | 3 |
thoracic segment of trunk | 1.73e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.91e-111 | 4 |
breast cancer | 8.91e-111 | 4 |
chondrosarcoma | 6.58e-50 | 1 |
extraosseous chondrosarcoma | 6.58e-50 | 1 |
myxoid chondrosarcoma | 6.58e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 6.58e-50 | 1 |
adenocarcinoma | 1.02e-18 | 25 |
disease of anatomical entity | 2.38e-12 | 39 |
connective tissue cancer | 1.57e-09 | 6 |
musculoskeletal system cancer | 1.57e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.