FFCP PHASE1:Hg19::chr13:32605483..32605496,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10129|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20367|TSSclassifier=S|UniProt=F8WC26,Q5TBA9,F8W6Q0|association_with_transcript=46bp_to_ENST00000380235,ENST00000380250,ENST00000380257,NM_023037,uc001utx.2,uc010tdw.1_5end|description=CAGE_peak_8_at_FRY_5end|id=chr13:32605483..32605496,+|ontology_enrichment_celltype=CL:0000763!4.64e-11!112;CL:0000049!4.64e-11!112;CL:0002057!7.87e-11!42;CL:0000766!1.90e-10!76;CL:0000860!2.92e-09!45;CL:0000557!4.25e-08!71;CL:0000839!1.54e-07!70|ontology_enrichment_celltype_v019=CL:0000860;4.13e-12;33!CL:0002057;4.13e-12;33!CL:0000094;8.03e-08;8!CL:0000473;1.33e-07;39!CL:0000234;1.33e-07;39!CL:0000576;1.75e-07;48!CL:0000081;3.05e-07;11!CL:0000766;4.21e-07;69|ontology_enrichment_celltype_v019_2=CL:0000766,5.60e-15,72;CL:0000763,1.31e-13,108;CL:0000049,1.31e-13,108;CL:0000557,1.01e-10,67;CL:0000839,6.94e-10,66;CL:0000860,1.05e-09,42;CL:0002057,1.05e-09,42;CL:0002194,5.24e-08,59;CL:0000576,5.24e-08,59;CL:0000040,5.24e-08,59;CL:0000559,5.24e-08,59;CL:0000473,7.71e-08,48;CL:0000234,7.71e-08,48;CL:0000094,8.64e-08,8;CL:0002009,1.47e-07,61;CL:0000081,2.92e-07,11|ontology_enrichment_development_v019=CL:0002057;3.28e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.68e-26!115;UBERON:0001049!1.11e-17!57;UBERON:0005068!1.11e-17!57;UBERON:0006241!1.11e-17!57;UBERON:0007135!1.11e-17!57;UBERON:0002780!1.84e-16!41;UBERON:0001890!1.84e-16!41;UBERON:0006240!1.84e-16!41;UBERON:0003080!1.08e-15!42;UBERON:0002616!1.55e-15!59;UBERON:0001017!1.36e-14!82;UBERON:0001893!1.82e-14!34;UBERON:0005743!2.04e-14!86;UBERON:0002020!4.57e-14!34;UBERON:0003528!4.57e-14!34;UBERON:0000073!5.59e-14!94;UBERON:0001016!5.59e-14!94;UBERON:0000955!5.60e-14!69;UBERON:0006238!5.60e-14!69;UBERON:0002791!8.05e-14!33;UBERON:0001869!1.27e-13!32;UBERON:0003075!1.08e-11!86;UBERON:0007284!1.08e-11!86;UBERON:0002619!3.45e-11!22;UBERON:0003056!1.92e-10!61;UBERON:0002346!2.74e-10!90;UBERON:0001950!3.77e-10!20;UBERON:0000956!1.26e-09!25;UBERON:0000203!1.26e-09!25;UBERON:0002390!2.61e-08!102;UBERON:0003061!2.61e-08!102;UBERON:0000153!6.95e-07!129;UBERON:0007811!6.95e-07!129;UBERON:0000033!8.02e-07!123|ontology_enrichment_uberon_v019=UBERON:0001893;6.37e-15;34!UBERON:0001869;8.06e-15;32!UBERON:0002619;1.26e-14;22!UBERON:0001950;3.16e-14;20!UBERON:0002791;9.63e-14;32!UBERON:0002780;7.88e-13;41!UBERON:0001890;7.88e-13;41!UBERON:0000956;2.12e-12;25!UBERON:0000203;2.12e-12;25!UBERON:0003528;4.76e-12;34!UBERON:0002020;4.76e-12;34!UBERON:0000073;1.78e-08;53!UBERON:0002616;1.78e-08;53!UBERON:0000955;1.80e-07;68!UBERON:0000369;1.83e-07;4!UBERON:0002435;1.83e-07;4!UBERON:0000204;1.83e-07;4!UBERON:0001871;3.59e-07;6!UBERON:0001017;5.39e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.64e-18,41;UBERON:0001890,1.64e-18,41;UBERON:0003080,1.64e-18,41;UBERON:0006240,1.64e-18,41;UBERON:0001893,8.31e-18,34;UBERON:0001869,1.11e-17,32;UBERON:0001049,2.80e-16,56;UBERON:0005068,2.80e-16,56;UBERON:0006241,2.80e-16,56;UBERON:0007135,2.80e-16,56;UBERON:0002791,8.06e-16,32;UBERON:0002619,2.02e-15,22;UBERON:0000073,4.41e-15,53;UBERON:0002616,4.41e-15,53;UBERON:0001950,4.62e-15,20;UBERON:0007023,6.05e-15,114;UBERON:0003528,1.47e-14,34;UBERON:0002020,1.47e-14,34;UBERON:0000955,4.91e-14,68;UBERON:0006238,4.91e-14,68;UBERON:0000956,4.39e-13,25;UBERON:0000203,4.39e-13,25;UBERON:0001017,3.54e-12,81;UBERON:0003056,5.44e-11,61;UBERON:0003075,3.47e-10,82;UBERON:0007284,3.47e-10,82;UBERON:0001016,4.35e-10,89;UBERON:0002346,2.47e-09,86;UBERON:0002390,7.51e-09,98;UBERON:0003061,7.51e-09,98;UBERON:0002371,1.36e-08,76;UBERON:0001871,1.09e-07,6;UBERON:0000369,1.35e-07,4;UBERON:0002435,1.35e-07,4;UBERON:0000204,1.35e-07,4;UBERON:0010082,1.35e-07,4;UBERON:0001474,1.86e-07,82;UBERON:0002193,2.87e-07,108|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0.0787107813136792,1.18009283054671,0,0.464448369948228,0,0,0,0,0.142169232487422,0.293600439334847,1.66198622559563,0.802177789880567,0.651032612147555,0,0,0,1.45398238779565,1.13362783106643,2.42584061187816,2.32429036905685,0.411167888021826,4.02618282163635,0.575384784644301,0.512321413058201,1.41889337933151,1.03423704220986,1.29096936716765,0,0.376484679085209,1.09162460023138,3.14612878223118,1.22433556948361,1.28371610830437,0,0.659702600373432,0.199463657621632,1.27867425159808,3.48251086354301,3.40431134814684,4.9825779919646,0.502497330513487,0,0.217188844705117,2.42159801053347,1.84138817993782,7.59509729858123,0,0.425208599930087,0.209658645508376,0.336985893439485,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,2.24203425192614,2.37045676297569,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0.390178042679635,0,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1278625618435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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20367 | |||
|TSSclassifier=S | |||
|UniProt=F8WC26,Q5TBA9,F8W6Q0 | |||
|association_with_transcript=46bp_to_ENST00000380235,ENST00000380250,ENST00000380257,NM_023037,uc001utx.2,uc010tdw.1_5end | |||
|description=CAGE_peak_8_at_FRY_5end | |||
|id=chr13:32605483..32605496,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.64e-11!112;CL:0000049!4.64e-11!112;CL:0002057!7.87e-11!42;CL:0000766!1.90e-10!76;CL:0000860!2.92e-09!45;CL:0000557!4.25e-08!71;CL:0000839!1.54e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-12;33!CL:0002057;4.13e-12;33!CL:0000094;8.03e-08;8!CL:0000473;1.33e-07;39!CL:0000234;1.33e-07;39!CL:0000576;1.75e-07;48!CL:0000081;3.05e-07;11!CL:0000766;4.21e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.60e-15,72;CL:0000763,1.31e-13,108;CL:0000049,1.31e-13,108;CL:0000557,1.01e-10,67;CL:0000839,6.94e-10,66;CL:0000860,1.05e-09,42;CL:0002057,1.05e-09,42;CL:0002194,5.24e-08,59;CL:0000576,5.24e-08,59;CL:0000040,5.24e-08,59;CL:0000559,5.24e-08,59;CL:0000473,7.71e-08,48;CL:0000234,7.71e-08,48;CL:0000094,8.64e-08,8;CL:0002009,1.47e-07,61;CL:0000081,2.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.28e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-26!115;UBERON:0001049!1.11e-17!57;UBERON:0005068!1.11e-17!57;UBERON:0006241!1.11e-17!57;UBERON:0007135!1.11e-17!57;UBERON:0002780!1.84e-16!41;UBERON:0001890!1.84e-16!41;UBERON:0006240!1.84e-16!41;UBERON:0003080!1.08e-15!42;UBERON:0002616!1.55e-15!59;UBERON:0001017!1.36e-14!82;UBERON:0001893!1.82e-14!34;UBERON:0005743!2.04e-14!86;UBERON:0002020!4.57e-14!34;UBERON:0003528!4.57e-14!34;UBERON:0000073!5.59e-14!94;UBERON:0001016!5.59e-14!94;UBERON:0000955!5.60e-14!69;UBERON:0006238!5.60e-14!69;UBERON:0002791!8.05e-14!33;UBERON:0001869!1.27e-13!32;UBERON:0003075!1.08e-11!86;UBERON:0007284!1.08e-11!86;UBERON:0002619!3.45e-11!22;UBERON:0003056!1.92e-10!61;UBERON:0002346!2.74e-10!90;UBERON:0001950!3.77e-10!20;UBERON:0000956!1.26e-09!25;UBERON:0000203!1.26e-09!25;UBERON:0002390!2.61e-08!102;UBERON:0003061!2.61e-08!102;UBERON:0000153!6.95e-07!129;UBERON:0007811!6.95e-07!129;UBERON:0000033!8.02e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.37e-15;34!UBERON:0001869;8.06e-15;32!UBERON:0002619;1.26e-14;22!UBERON:0001950;3.16e-14;20!UBERON:0002791;9.63e-14;32!UBERON:0002780;7.88e-13;41!UBERON:0001890;7.88e-13;41!UBERON:0000956;2.12e-12;25!UBERON:0000203;2.12e-12;25!UBERON:0003528;4.76e-12;34!UBERON:0002020;4.76e-12;34!UBERON:0000073;1.78e-08;53!UBERON:0002616;1.78e-08;53!UBERON:0000955;1.80e-07;68!UBERON:0000369;1.83e-07;4!UBERON:0002435;1.83e-07;4!UBERON:0000204;1.83e-07;4!UBERON:0001871;3.59e-07;6!UBERON:0001017;5.39e-07;75 | |||
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| |||
|short_description=p8@FRY | |||
}} |
Revision as of 02:02, 11 September 2013
Short description: | p8@FRY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_FRY_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000380235, ENST00000380250, ENST00000380257, NM_023037, uc001utx.2, uc010tdw.1_5end |
EntrezGene: | FRY |
HGNC: | 20367 |
UniProt: | F8WC26Q5TBA9F8W6Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.60e-15 | 72 |
myeloid cell | 1.31e-13 | 108 |
common myeloid progenitor | 1.31e-13 | 108 |
granulocyte monocyte progenitor cell | 1.01e-10 | 67 |
myeloid lineage restricted progenitor cell | 6.94e-10 | 66 |
classical monocyte | 1.05e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-09 | 42 |
monopoietic cell | 5.24e-08 | 59 |
monocyte | 5.24e-08 | 59 |
monoblast | 5.24e-08 | 59 |
promonocyte | 5.24e-08 | 59 |
defensive cell | 7.71e-08 | 48 |
phagocyte | 7.71e-08 | 48 |
granulocyte | 8.64e-08 | 8 |
macrophage dendritic cell progenitor | 1.47e-07 | 61 |
blood cell | 2.92e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.