FFCP PHASE1:Hg19::chr13:51289225..51289244,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C803|description=CAGE_peak_at_chr13:51289225..51289244,-|id=chr13:51289225..51289244,-|ontology_enrichment_celltype=CL:0002057!3.35e-61!42;CL:0002194!1.05e-57!63;CL:0000576!1.05e-57!63;CL:0000040!1.05e-57!63;CL:0000559!1.05e-57!63;CL:0000766!1.21e-57!76;CL:0000860!4.74e-56!45;CL:0002009!2.26e-55!65;CL:0000839!3.97e-50!70;CL:0000557!3.62e-49!71;CL:0000763!7.22e-39!112;CL:0000049!7.22e-39!112;CL:0000738!3.78e-30!140;CL:0002087!3.90e-28!119;CL:0000037!8.93e-25!172;CL:0000566!8.93e-25!172;CL:0002031!1.08e-22!124;CL:0000988!3.02e-22!182;CL:0002032!1.07e-21!165;CL:0000837!1.07e-21!165;CL:0002393!5.23e-13!9;CL:0002397!5.23e-13!9|ontology_enrichment_celltype_v019=CL:0000473;1.01e-74;39!CL:0000234;1.01e-74;39!CL:0000860;2.03e-74;33!CL:0002057;2.03e-74;33!CL:0000576;2.27e-60;48!CL:0000766;2.80e-47;69!CL:0000763;1.87e-23;100!CL:0000235;8.42e-17;6!CL:0002393;1.54e-15;6!CL:0002397;1.54e-15;6!CL:0002087;2.44e-14;104!CL:0000738;2.17e-12;136!CL:0002619;6.28e-09;3!CL:0000988;7.17e-09;177!CL:0000094;4.48e-08;8|ontology_enrichment_celltype_v019_2=CL:0000473,9.19e-110,48;CL:0000234,9.19e-110,48;CL:0002194,6.81e-98,59;CL:0000576,6.81e-98,59;CL:0000040,6.81e-98,59;CL:0000559,6.81e-98,59;CL:0000766,2.07e-96,72;CL:0002009,2.61e-94,61;CL:0000860,1.24e-93,42;CL:0002057,1.24e-93,42;CL:0000839,2.74e-86,66;CL:0000557,7.94e-85,67;CL:0000763,5.27e-68,108;CL:0000049,5.27e-68,108;CL:0000738,6.49e-49,136;CL:0002087,1.23e-48,115;CL:0000037,3.23e-42,168;CL:0002031,6.15e-42,120;CL:0002032,4.74e-41,161;CL:0000837,4.74e-41,161;CL:0000988,2.42e-39,177;CL:0000235,7.78e-17,6;CL:0002393,9.57e-14,9;CL:0002397,9.57e-14,9;CL:0000134,1.47e-12,354;CL:0002320,4.78e-12,361;CL:0000219,6.30e-11,386;CL:0002619,7.81e-09,3;CL:0000048,4.47e-08,427;CL:0000094,5.17e-08,8;CL:0000723,8.84e-08,433;CL:0000034,2.13e-07,441|ontology_enrichment_development_v019=CL:0002057;5.15e-67;42!CL:0000049;4.67e-20;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.16e-51!102;UBERON:0003061!9.16e-51!102;UBERON:0002193!1.83e-47!112;UBERON:0002371!1.29e-41!80;UBERON:0001474!1.82e-37!86;UBERON:0002405!8.30e-32!115;UBERON:0004765!2.72e-29!101;UBERON:0001434!2.72e-29!101;UBERON:0007023!5.15e-25!115;UBERON:0003081!2.81e-16!216;UBERON:0001049!1.72e-14!57;UBERON:0005068!1.72e-14!57;UBERON:0006241!1.72e-14!57;UBERON:0007135!1.72e-14!57;UBERON:0001893!2.08e-12!34;UBERON:0002020!2.13e-12!34;UBERON:0003528!2.13e-12!34;UBERON:0002204!6.00e-12!167;UBERON:0002791!1.14e-11!33;UBERON:0002780!1.47e-11!41;UBERON:0001890!1.47e-11!41;UBERON:0006240!1.47e-11!41;UBERON:0002616!1.63e-11!59;UBERON:0003080!3.85e-11!42;UBERON:0001017!3.91e-11!82;UBERON:0000955!4.32e-11!69;UBERON:0006238!4.32e-11!69;UBERON:0005743!5.68e-11!86;UBERON:0001869!1.20e-10!32;UBERON:0000073!4.57e-09!94;UBERON:0001016!4.57e-09!94;UBERON:0003075!8.48e-09!86;UBERON:0007284!8.48e-09!86;UBERON:0002420!9.88e-09!9;UBERON:0007245!9.88e-09!9;UBERON:0010009!9.88e-09!9;UBERON:0010011!9.88e-09!9;UBERON:0000454!9.88e-09!9;UBERON:0002308!1.74e-08!9;UBERON:0000125!1.74e-08!9;UBERON:0000178!3.77e-08!15;UBERON:0000179!3.77e-08!15;UBERON:0000463!3.77e-08!15;UBERON:0000062!3.83e-08!511;UBERON:0002346!4.85e-08!90;UBERON:0002619!6.11e-08!22;UBERON:0002298!9.48e-08!8;UBERON:0003056!2.85e-07!61;UBERON:0000349!4.70e-07!5|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-07;15!UBERON:0000179;2.10e-07;15!UBERON:0000463;2.10e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-73,76;UBERON:0002390,7.44e-73,98;UBERON:0003061,7.44e-73,98;UBERON:0002193,1.39e-67,108;UBERON:0001474,4.04e-67,82;UBERON:0002405,1.83e-60,93;UBERON:0004765,4.58e-60,90;UBERON:0001434,8.02e-53,100;UBERON:0003081,4.55e-28,203;UBERON:0002204,1.32e-26,167;UBERON:0000926,3.02e-13,315;UBERON:0004120,3.02e-13,315;UBERON:0006603,3.02e-13,315;UBERON:0002384,2.39e-11,371;UBERON:0000178,1.99e-07,15;UBERON:0000179,1.99e-07,15;UBERON:0000463,1.99e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.383829398097213,1.70297735647684,0,0,0,0,0,0,4.43196326825502,5.21415563422368,3.25516306073778,5.15005590751826,1.29557466407592,4.37878464978117,7.26991193897824,6.04601509902095,3.88134497900506,6.50801303335917,4.52284676824008,6.50383378879718,2.3015391385772,2.30544635876191,3.07426898855161,4.13694816883942,4.51839278508678,8.12558919566051,4.51781614902251,6.27684145133045,5.61808711112712,2.14258724659632,5.45579346029359,4.47535988059329,1.64925650093358,2.99195486432448,4.26224750532694,5.22376629531451,5.6738522469114,6.22822248995575,0.75374599577023,3.12889751052121,2.6062661364614,1.81619850790011,6.62899744777616,5.37986058649504,1.90129757680748,1.27562579979026,1.67726916406701,4.26848798356681,5.40636814229423,6.10757229448904,0.855038231223746,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C803 | |||
|description=CAGE_peak_at_chr13:51289225..51289244,- | |||
|id=chr13:51289225..51289244,- | |||
|ontology_enrichment_celltype=CL:0002057!3.35e-61!42;CL:0002194!1.05e-57!63;CL:0000576!1.05e-57!63;CL:0000040!1.05e-57!63;CL:0000559!1.05e-57!63;CL:0000766!1.21e-57!76;CL:0000860!4.74e-56!45;CL:0002009!2.26e-55!65;CL:0000839!3.97e-50!70;CL:0000557!3.62e-49!71;CL:0000763!7.22e-39!112;CL:0000049!7.22e-39!112;CL:0000738!3.78e-30!140;CL:0002087!3.90e-28!119;CL:0000037!8.93e-25!172;CL:0000566!8.93e-25!172;CL:0002031!1.08e-22!124;CL:0000988!3.02e-22!182;CL:0002032!1.07e-21!165;CL:0000837!1.07e-21!165;CL:0002393!5.23e-13!9;CL:0002397!5.23e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.01e-74;39!CL:0000234;1.01e-74;39!CL:0000860;2.03e-74;33!CL:0002057;2.03e-74;33!CL:0000576;2.27e-60;48!CL:0000766;2.80e-47;69!CL:0000763;1.87e-23;100!CL:0000235;8.42e-17;6!CL:0002393;1.54e-15;6!CL:0002397;1.54e-15;6!CL:0002087;2.44e-14;104!CL:0000738;2.17e-12;136!CL:0002619;6.28e-09;3!CL:0000988;7.17e-09;177!CL:0000094;4.48e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.19e-110,48;CL:0000234,9.19e-110,48;CL:0002194,6.81e-98,59;CL:0000576,6.81e-98,59;CL:0000040,6.81e-98,59;CL:0000559,6.81e-98,59;CL:0000766,2.07e-96,72;CL:0002009,2.61e-94,61;CL:0000860,1.24e-93,42;CL:0002057,1.24e-93,42;CL:0000839,2.74e-86,66;CL:0000557,7.94e-85,67;CL:0000763,5.27e-68,108;CL:0000049,5.27e-68,108;CL:0000738,6.49e-49,136;CL:0002087,1.23e-48,115;CL:0000037,3.23e-42,168;CL:0002031,6.15e-42,120;CL:0002032,4.74e-41,161;CL:0000837,4.74e-41,161;CL:0000988,2.42e-39,177;CL:0000235,7.78e-17,6;CL:0002393,9.57e-14,9;CL:0002397,9.57e-14,9;CL:0000134,1.47e-12,354;CL:0002320,4.78e-12,361;CL:0000219,6.30e-11,386;CL:0002619,7.81e-09,3;CL:0000048,4.47e-08,427;CL:0000094,5.17e-08,8;CL:0000723,8.84e-08,433;CL:0000034,2.13e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.15e-67;42!CL:0000049;4.67e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.16e-51!102;UBERON:0003061!9.16e-51!102;UBERON:0002193!1.83e-47!112;UBERON:0002371!1.29e-41!80;UBERON:0001474!1.82e-37!86;UBERON:0002405!8.30e-32!115;UBERON:0004765!2.72e-29!101;UBERON:0001434!2.72e-29!101;UBERON:0007023!5.15e-25!115;UBERON:0003081!2.81e-16!216;UBERON:0001049!1.72e-14!57;UBERON:0005068!1.72e-14!57;UBERON:0006241!1.72e-14!57;UBERON:0007135!1.72e-14!57;UBERON:0001893!2.08e-12!34;UBERON:0002020!2.13e-12!34;UBERON:0003528!2.13e-12!34;UBERON:0002204!6.00e-12!167;UBERON:0002791!1.14e-11!33;UBERON:0002780!1.47e-11!41;UBERON:0001890!1.47e-11!41;UBERON:0006240!1.47e-11!41;UBERON:0002616!1.63e-11!59;UBERON:0003080!3.85e-11!42;UBERON:0001017!3.91e-11!82;UBERON:0000955!4.32e-11!69;UBERON:0006238!4.32e-11!69;UBERON:0005743!5.68e-11!86;UBERON:0001869!1.20e-10!32;UBERON:0000073!4.57e-09!94;UBERON:0001016!4.57e-09!94;UBERON:0003075!8.48e-09!86;UBERON:0007284!8.48e-09!86;UBERON:0002420!9.88e-09!9;UBERON:0007245!9.88e-09!9;UBERON:0010009!9.88e-09!9;UBERON:0010011!9.88e-09!9;UBERON:0000454!9.88e-09!9;UBERON:0002308!1.74e-08!9;UBERON:0000125!1.74e-08!9;UBERON:0000178!3.77e-08!15;UBERON:0000179!3.77e-08!15;UBERON:0000463!3.77e-08!15;UBERON:0000062!3.83e-08!511;UBERON:0002346!4.85e-08!90;UBERON:0002619!6.11e-08!22;UBERON:0002298!9.48e-08!8;UBERON:0003056!2.85e-07!61;UBERON:0000349!4.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-07;15!UBERON:0000179;2.10e-07;15!UBERON:0000463;2.10e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-73,76;UBERON:0002390,7.44e-73,98;UBERON:0003061,7.44e-73,98;UBERON:0002193,1.39e-67,108;UBERON:0001474,4.04e-67,82;UBERON:0002405,1.83e-60,93;UBERON:0004765,4.58e-60,90;UBERON:0001434,8.02e-53,100;UBERON:0003081,4.55e-28,203;UBERON:0002204,1.32e-26,167;UBERON:0000926,3.02e-13,315;UBERON:0004120,3.02e-13,315;UBERON:0006603,3.02e-13,315;UBERON:0002384,2.39e-11,371;UBERON:0000178,1.99e-07,15;UBERON:0000179,1.99e-07,15;UBERON:0000463,1.99e-07,15 | |||
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|short_description=p@chr13:51289225..51289244,- | |||
}} |
Revision as of 02:34, 11 September 2013
Short description: | p@chr13:51289225..51289244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:51289225..51289244, - |
Coexpression cluster: | C803_Macrophage_CD14_Monocytederived_Eosinophils_Basophils_CD14CD16_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-73 | 76 |
hematopoietic system | 7.44e-73 | 98 |
blood island | 7.44e-73 | 98 |
hemolymphoid system | 1.39e-67 | 108 |
bone element | 4.04e-67 | 82 |
immune system | 1.83e-60 | 93 |
skeletal element | 4.58e-60 | 90 |
skeletal system | 8.02e-53 | 100 |
lateral plate mesoderm | 4.55e-28 | 203 |
musculoskeletal system | 1.32e-26 | 167 |
mesoderm | 3.02e-13 | 315 |
mesoderm-derived structure | 3.02e-13 | 315 |
presumptive mesoderm | 3.02e-13 | 315 |
connective tissue | 2.39e-11 | 371 |
blood | 1.99e-07 | 15 |
haemolymphatic fluid | 1.99e-07 | 15 |
organism substance | 1.99e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.