FFCP PHASE1:Hg19::chr14:67878804..67878812,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26499|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19238|TSSclassifier=S|UniProt=Q9NYT0|association_with_transcript=15bp_to_NM_016445,uc001xjh.1_5end|coexpression_cluster_id=C1188|description=CAGE_peak_3_at_PLEK2_5end|id=chr14:67878804..67878812,-|ontology_enrichment_celltype=CL:0000066!8.91e-20!254;CL:0002076!8.15e-15!43;CL:0000223!7.63e-12!59;CL:0002368!3.01e-10!13;CL:0002159!4.97e-09!13;CL:0000220!9.07e-08!246;CL:0002321!1.49e-07!248|ontology_enrichment_celltype_v019=CL:0002159;4.97e-20;14!CL:0002368;1.32e-16;13!CL:0000244;8.50e-16;4!CL:0000731;8.50e-16;4!CL:0002621;1.73e-12;3!CL:0000307;2.13e-12;3!CL:0002166;8.23e-12;3!CL:0000362;1.91e-10;9!CL:0000240;2.15e-10;6!CL:0000311;2.15e-10;6!CL:0000079;2.15e-10;6!CL:0000237;2.15e-10;6!CL:0002202;3.40e-10;9!CL:0002632;3.40e-10;9!CL:0002076;8.63e-10;42!CL:0002077;9.45e-10;34!CL:0000317;1.22e-08;2!CL:1000448;1.22e-08;2!CL:0002308;1.22e-08;2!CL:0002140;1.22e-08;2!CL:0001014;1.55e-08;2!CL:0001016;1.55e-08;2!CL:0000312;1.88e-07;5|ontology_enrichment_celltype_v019_2=CL:0002159,7.77e-20,14;CL:0002368,1.25e-16,13;CL:0000244,9.36e-16,4;CL:0000731,9.36e-16,4;CL:0000066,1.65e-14,253;CL:0002621,1.74e-12,3;CL:0000068,2.73e-12,3;CL:0000069,2.73e-12,3;CL:0000307,2.73e-12,3;CL:0000377,2.73e-12,3;CL:0002076,5.60e-12,42;CL:0002166,9.55e-12,3;CL:0000223,8.76e-11,58;CL:0002077,1.05e-10,34;CL:0000240,2.10e-10,6;CL:0000311,2.10e-10,6;CL:0000079,2.10e-10,6;CL:0000237,2.10e-10,6;CL:0000036,2.10e-10,6;CL:0000357,2.10e-10,6;CL:0000114,2.10e-10,6;CL:0000362,2.19e-10,9;CL:0002202,3.44e-10,9;CL:0002632,3.44e-10,9;CL:0000317,1.44e-08,2;CL:1000448,1.44e-08,2;CL:0002308,1.44e-08,2;CL:0002140,1.44e-08,2;CL:0001014,1.55e-08,2;CL:0001016,1.55e-08,2;CL:0000312,1.99e-07,5;CL:0002321,5.74e-07,250|ontology_enrichment_development_v019=CL:0000377;2.13e-12;3!CL:0000357;2.15e-10;6!CL:0000114;2.15e-10;6!CL:0000223;8.35e-07;58|ontology_enrichment_disease=DOID:305!5.53e-09!106;DOID:1749!9.35e-09!14|ontology_enrichment_disease_v019=DOID:4929;2.24e-08;2|ontology_enrichment_disease_v019_2=DOID:4929,2.09e-08,2|ontology_enrichment_uberon=UBERON:0004119!6.32e-13!169;UBERON:0000925!6.32e-13!169;UBERON:0006595!6.32e-13!169;UBERON:0001007!6.13e-10!155;UBERON:0001555!6.13e-10!155;UBERON:0007026!6.13e-10!155;UBERON:0005911!1.31e-09!82;UBERON:0003104!9.17e-09!238;UBERON:0009142!9.17e-09!238;UBERON:0001048!3.26e-08!168;UBERON:0000923!4.65e-08!604;UBERON:0005291!4.65e-08!604;UBERON:0006598!4.65e-08!604;UBERON:0002532!4.65e-08!604;UBERON:0002050!5.59e-08!605;UBERON:0005423!5.59e-08!605;UBERON:0001004!6.71e-08!72;UBERON:0000467!1.64e-07!625;UBERON:0000480!1.96e-07!626;UBERON:0000922!1.98e-07!612;UBERON:0000065!2.85e-07!53;UBERON:0000365!3.77e-07!5;UBERON:0000481!5.78e-07!347;UBERON:0001041!8.72e-07!98|ontology_enrichment_uberon_v019=UBERON:0000486;5.16e-15;12!UBERON:0000365;1.21e-12;5!UBERON:0001949;1.73e-12;3!UBERON:0005910;1.55e-10;6!UBERON:0010371;5.29e-10;31!UBERON:0001708;5.83e-09;4!UBERON:0008895;5.83e-09;4!UBERON:0002419;1.22e-08;2!UBERON:0007771;1.22e-08;2!UBERON:0003297;1.22e-08;2!UBERON:0001821;1.22e-08;2!UBERON:0003487;1.22e-08;2!UBERON:0001820;1.22e-08;2!UBERON:0001003;2.12e-08;15!UBERON:0007376;2.12e-08;15!UBERON:0011159;3.05e-07;5!UBERON:0005911;8.56e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.31e-12,5;UBERON:0001949,1.74e-12,3;UBERON:0005910,1.65e-10,6;UBERON:0001708,6.51e-09,4;UBERON:0008895,6.51e-09,4;UBERON:0002419,1.44e-08,2;UBERON:0007771,1.44e-08,2;UBERON:0003297,1.44e-08,2;UBERON:0001821,1.44e-08,2;UBERON:0003487,1.44e-08,2;UBERON:0001820,1.44e-08,2;UBERON:0005089,1.44e-08,2;UBERON:0005088,1.44e-08,2;UBERON:0001003,2.38e-08,15;UBERON:0007376,2.38e-08,15;UBERON:0007383,2.38e-08,15;UBERON:0011159,3.33e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.655324116390517,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.50602959389125,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,1.09288586487763,0.741568885568859,0.324547393654683,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0.339121184620975,5.60456474173561,6.54590689418003,5.73609190778008,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,2.19500570817251,7.86812272803337,4.02115889646523,3.98130314181677,0,0,0,0,0,0,0,0,0,0,0,0,0,9.3733833986777,1.34385702559088,3.68615252830205,4.746601703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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19238 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYT0 | |||
|association_with_transcript=15bp_to_NM_016445,uc001xjh.1_5end | |||
|coexpression_cluster_id=C1188 | |||
|description=CAGE_peak_3_at_PLEK2_5end | |||
|id=chr14:67878804..67878812,- | |||
|ontology_enrichment_celltype=CL:0000066!8.91e-20!254;CL:0002076!8.15e-15!43;CL:0000223!7.63e-12!59;CL:0002368!3.01e-10!13;CL:0002159!4.97e-09!13;CL:0000220!9.07e-08!246;CL:0002321!1.49e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.97e-20;14!CL:0002368;1.32e-16;13!CL:0000244;8.50e-16;4!CL:0000731;8.50e-16;4!CL:0002621;1.73e-12;3!CL:0000307;2.13e-12;3!CL:0002166;8.23e-12;3!CL:0000362;1.91e-10;9!CL:0000240;2.15e-10;6!CL:0000311;2.15e-10;6!CL:0000079;2.15e-10;6!CL:0000237;2.15e-10;6!CL:0002202;3.40e-10;9!CL:0002632;3.40e-10;9!CL:0002076;8.63e-10;42!CL:0002077;9.45e-10;34!CL:0000317;1.22e-08;2!CL:1000448;1.22e-08;2!CL:0002308;1.22e-08;2!CL:0002140;1.22e-08;2!CL:0001014;1.55e-08;2!CL:0001016;1.55e-08;2!CL:0000312;1.88e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.77e-20,14;CL:0002368,1.25e-16,13;CL:0000244,9.36e-16,4;CL:0000731,9.36e-16,4;CL:0000066,1.65e-14,253;CL:0002621,1.74e-12,3;CL:0000068,2.73e-12,3;CL:0000069,2.73e-12,3;CL:0000307,2.73e-12,3;CL:0000377,2.73e-12,3;CL:0002076,5.60e-12,42;CL:0002166,9.55e-12,3;CL:0000223,8.76e-11,58;CL:0002077,1.05e-10,34;CL:0000240,2.10e-10,6;CL:0000311,2.10e-10,6;CL:0000079,2.10e-10,6;CL:0000237,2.10e-10,6;CL:0000036,2.10e-10,6;CL:0000357,2.10e-10,6;CL:0000114,2.10e-10,6;CL:0000362,2.19e-10,9;CL:0002202,3.44e-10,9;CL:0002632,3.44e-10,9;CL:0000317,1.44e-08,2;CL:1000448,1.44e-08,2;CL:0002308,1.44e-08,2;CL:0002140,1.44e-08,2;CL:0001014,1.55e-08,2;CL:0001016,1.55e-08,2;CL:0000312,1.99e-07,5;CL:0002321,5.74e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;2.13e-12;3!CL:0000357;2.15e-10;6!CL:0000114;2.15e-10;6!CL:0000223;8.35e-07;58 | |||
|ontology_enrichment_disease=DOID:305!5.53e-09!106;DOID:1749!9.35e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.24e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.32e-13!169;UBERON:0000925!6.32e-13!169;UBERON:0006595!6.32e-13!169;UBERON:0001007!6.13e-10!155;UBERON:0001555!6.13e-10!155;UBERON:0007026!6.13e-10!155;UBERON:0005911!1.31e-09!82;UBERON:0003104!9.17e-09!238;UBERON:0009142!9.17e-09!238;UBERON:0001048!3.26e-08!168;UBERON:0000923!4.65e-08!604;UBERON:0005291!4.65e-08!604;UBERON:0006598!4.65e-08!604;UBERON:0002532!4.65e-08!604;UBERON:0002050!5.59e-08!605;UBERON:0005423!5.59e-08!605;UBERON:0001004!6.71e-08!72;UBERON:0000467!1.64e-07!625;UBERON:0000480!1.96e-07!626;UBERON:0000922!1.98e-07!612;UBERON:0000065!2.85e-07!53;UBERON:0000365!3.77e-07!5;UBERON:0000481!5.78e-07!347;UBERON:0001041!8.72e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.16e-15;12!UBERON:0000365;1.21e-12;5!UBERON:0001949;1.73e-12;3!UBERON:0005910;1.55e-10;6!UBERON:0010371;5.29e-10;31!UBERON:0001708;5.83e-09;4!UBERON:0008895;5.83e-09;4!UBERON:0002419;1.22e-08;2!UBERON:0007771;1.22e-08;2!UBERON:0003297;1.22e-08;2!UBERON:0001821;1.22e-08;2!UBERON:0003487;1.22e-08;2!UBERON:0001820;1.22e-08;2!UBERON:0001003;2.12e-08;15!UBERON:0007376;2.12e-08;15!UBERON:0011159;3.05e-07;5!UBERON:0005911;8.56e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.31e-12,5;UBERON:0001949,1.74e-12,3;UBERON:0005910,1.65e-10,6;UBERON:0001708,6.51e-09,4;UBERON:0008895,6.51e-09,4;UBERON:0002419,1.44e-08,2;UBERON:0007771,1.44e-08,2;UBERON:0003297,1.44e-08,2;UBERON:0001821,1.44e-08,2;UBERON:0003487,1.44e-08,2;UBERON:0001820,1.44e-08,2;UBERON:0005089,1.44e-08,2;UBERON:0005088,1.44e-08,2;UBERON:0001003,2.38e-08,15;UBERON:0007376,2.38e-08,15;UBERON:0007383,2.38e-08,15;UBERON:0011159,3.33e-07,5 | |||
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|short_description=p3@PLEK2 | |||
}} |
Revision as of 05:13, 11 September 2013
Short description: | p3@PLEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PLEK2_5end |
Coexpression cluster: | C1188_Urothelial_Gingival_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Prostate |
Association with transcript: | 15bp_to_NM_016445, uc001xjh.1_5end |
EntrezGene: | PLEK2 |
HGNC: | 19238 |
UniProt: | Q9NYT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 1.31e-12 | 5 |
gingival epithelium | 1.74e-12 | 3 |
transitional epithelium | 1.65e-10 | 6 |
jaw skeleton | 6.51e-09 | 4 |
splanchnocranium | 6.51e-09 | 4 |
skin gland | 1.44e-08 | 2 |
epidermis gland | 1.44e-08 | 2 |
gland of integumental system | 1.44e-08 | 2 |
sebaceous gland | 1.44e-08 | 2 |
skin sebaceous gland | 1.44e-08 | 2 |
sweat gland | 1.44e-08 | 2 |
sweat gland placode | 1.44e-08 | 2 |
sebaceous gland placode | 1.44e-08 | 2 |
skin epidermis | 2.38e-08 | 15 |
outer epithelium | 2.38e-08 | 15 |
enveloping layer of ectoderm | 2.38e-08 | 15 |
primary subdivision of cranial skeletal system | 3.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.09e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.