FFCP PHASE1:Hg19::chr15:59397404..59397415,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9133|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1580|TSSclassifier=S|UniProt=|association_with_transcript=48bp_to_ENST00000559622_5end|description=CAGE_peak_3_at_CCNB2_5end|id=chr15:59397404..59397415,+|ontology_enrichment_celltype=CL:0000066!2.25e-17!254;CL:0000012!1.03e-14!682;CL:0000548!6.82e-14!679;CL:0000004!6.82e-14!679;CL:0000255!6.82e-14!679;CL:0002321!1.04e-08!248;CL:0000133!3.43e-08!59;CL:0000220!4.34e-08!246;CL:0000003!2.27e-07!722;CL:0000333!3.12e-07!41|ontology_enrichment_celltype_v019=CL:0002321;1.40e-07;15|ontology_enrichment_celltype_v019_2=CL:0000066,4.08e-11,253;CL:0000133,5.60e-07,59|ontology_enrichment_development_v019=UBERON:0008947;3.85e-08;29|ontology_enrichment_disease=DOID:162!4.33e-47!235;DOID:14566!4.64e-46!239;DOID:0050687!7.60e-33!143;DOID:305!6.87e-24!106;DOID:0050686!1.26e-18!137;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22;DOID:2531!7.73e-09!51;DOID:0060083!7.73e-09!51|ontology_enrichment_disease_v019=DOID:3095;1.07e-10;22!DOID:2994;1.07e-10;22!DOID:1324;8.77e-07;15|ontology_enrichment_disease_v019_2=DOID:162,5.66e-36,235;DOID:14566,8.27e-36,239;DOID:0050687,7.16e-26,143;DOID:305,1.34e-17,106;DOID:0050686,6.67e-14,137;DOID:3095,2.13e-11,22;DOID:2994,2.13e-11,22;DOID:2531,8.71e-08,51;DOID:0060083,8.71e-08,51;DOID:1324,6.19e-07,15|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,0,1.09220686065086,0.791300934685361,1.36142988256051,0,2.01697543935533,0.602694528023977,0.730310090387373,0,0.246242116153576,0.408001382488506,0.313454721478088,1.14494394852423,1.77936752594749,2.51085279189606,0.61130724598361,0.328402357799783,0.944529375764151,0,0,0,0,0.30120591877825,0.739508020333575,1.70427841276664,1.9903692548239,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0.221533894583621,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,1.44575660953827,0,2.75208386025565,0,0.486634870302636,1.79616152611729,0.886917589850256,1.84453049955565,0.392937226493138,0.364295288292542,0.741568885568859,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0,1.25849830862972,2.47606237746061,0.835979866147242,0,0,0.33472061276467,0,0,0.732186172644509,0.367663080345869,0,1.16089646769304,1.12264686313085,1.35133776579987,0,0.949265659568129,0.916008719652036,0,0,0,0,1.51956613997496,0,0.286836620748814,0.709336764396714,0,0,0,0,1.21239604862719,0.163461903113459,0.454072282934794,1.15235184896,0.937285727335186,0.312160076830321,1.71141546463335,0.597794722207204,1.29177948508141,1.45685649931318,0.702254033511242,1.63323337003915,1.47401180774122,1.44656093646072,0,0.494533858557114,0,0.718618141816238,2.69337782326506,0.875829639103749,0.277064115484183,1.31693286264251,0.30648779579902,0.45071417671979,1.02088964844019,0.89694817844431,0,0.211931901159562,1.20036438433761,0.103052529238439,0,0.18611685633159,0.337552664482532,1.16924406193438,0.252433774244115,0.276149695926898,0,0.355009592516614,1.30977727695932,0.67824236924195,0,0.272746120590835,0,7.68434348616451,10.0722623924329,9.29551542956147,7.15261279606056,7.31730467539322,3.28479623168247,1.56449532329816,1.92972281457866,0,0,0.721879481669586,2.72105640091641,1.34867752062481,2.6511213287183,2.09558548191549,2.83243277320128,1.89816495288877,2.29213223872279,1.96221465125346,1.15424147083917,0,0,0,0,0,0,0,1.32438929824395,2.09080345523293,1.3725424823882,0.109750285408626,0,0.703702806881416,1.66659201285353,1.3032332212413,2.07986957055916,0,2.55046890945169,0.234817388471643,0,2.31492756288305,0,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,1.97028749946266,0.871901815541886,3.06706143332169,0,0,0.207328115540772,0,0,0.571481048629521,0.381988425558278,1.17217447210047,1.71072446022705,0.411309970813294,1.8020583470635,0,1.00917975910825,0.87192013766656,1.83345714552375,0,0,0.845302752556,0.531876233169741,0,0.771622122786426,1.41849132023278,1.8649552531127,1.57275793023962,0,0,0.325736184293735,2.13235169245527,3.16780749173372,0,0,0.099972991182057,0,0,0,0,1.14861935834114,2.85273810081437,0,1.2328579353023,1.25342674267927,2.12961773587702,0,0,0,0.76228387266739,3.90419561572865,0,0.335032530668698,0,0,0,0,1.47229790062968,1.00034104211935,0,0.207970861530807,1.60586089917446,1.73472656537328,0.117141414992713,0,0,1.03473071292505,0.664225598535437,1.10621501125022,1.65078867489357,0,0,0,0,0,0.303127571446259,0,2.11673205330776,0,0.153461973288062,0,0,0,0.160853921143607,0,0.925258162815933,0.5326851759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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=48bp_to_ENST00000559622_5end | |||
|description=CAGE_peak_3_at_CCNB2_5end | |||
|id=chr15:59397404..59397415,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.25e-17!254;CL:0000012!1.03e-14!682;CL:0000548!6.82e-14!679;CL:0000004!6.82e-14!679;CL:0000255!6.82e-14!679;CL:0002321!1.04e-08!248;CL:0000133!3.43e-08!59;CL:0000220!4.34e-08!246;CL:0000003!2.27e-07!722;CL:0000333!3.12e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002321;1.40e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.08e-11,253;CL:0000133,5.60e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.85e-08;29 | |||
|ontology_enrichment_disease=DOID:162!4.33e-47!235;DOID:14566!4.64e-46!239;DOID:0050687!7.60e-33!143;DOID:305!6.87e-24!106;DOID:0050686!1.26e-18!137;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22;DOID:2531!7.73e-09!51;DOID:0060083!7.73e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.07e-10;22!DOID:2994;1.07e-10;22!DOID:1324;8.77e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.66e-36,235;DOID:14566,8.27e-36,239;DOID:0050687,7.16e-26,143;DOID:305,1.34e-17,106;DOID:0050686,6.67e-14,137;DOID:3095,2.13e-11,22;DOID:2994,2.13e-11,22;DOID:2531,8.71e-08,51;DOID:0060083,8.71e-08,51;DOID:1324,6.19e-07,15 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@CCNB2 | |||
}} |
Revision as of 07:39, 11 September 2013
Short description: | p3@CCNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CCNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000559622_5end |
EntrezGene: | CCNB2 |
HGNC: | 1580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.08e-11 | 253 |
neurectodermal cell | 5.60e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.66e-36 | 235 |
disease of cellular proliferation | 8.27e-36 | 239 |
cell type cancer | 7.16e-26 | 143 |
carcinoma | 1.34e-17 | 106 |
organ system cancer | 6.67e-14 | 137 |
germ cell and embryonal cancer | 2.13e-11 | 22 |
germ cell cancer | 2.13e-11 | 22 |
hematologic cancer | 8.71e-08 | 51 |
immune system cancer | 8.71e-08 | 51 |
lung cancer | 6.19e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.