FFCP PHASE1:Hg19::chr15:76349345..76349369,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:76349345..76349369,-|id=chr15:76349345..76349369,-|ontology_enrichment_celltype=CL:0000037!9.44e-31!172;CL:0000566!9.44e-31!172;CL:0002032!4.68e-29!165;CL:0000837!4.68e-29!165;CL:0000988!1.85e-28!182;CL:0000945!5.97e-25!24;CL:0000826!5.97e-25!24;CL:0000763!4.49e-16!112;CL:0000049!4.49e-16!112;CL:0000738!1.07e-13!140;CL:0000542!1.28e-12!53;CL:0000051!1.28e-12!53;CL:0002031!1.32e-12!124;CL:0002087!4.05e-12!119;CL:0000838!3.73e-11!52;CL:0000134!3.79e-09!358;CL:0002320!9.02e-09!365;CL:0001014!1.67e-08!2;CL:0001016!1.67e-08!2;CL:0000219!1.88e-07!390;CL:0000034!5.32e-07!444|ontology_enrichment_celltype_v019=CL:0000945;1.66e-30;24!CL:0001014;8.72e-15;2!CL:0001016;8.72e-15;2!CL:0000037;3.80e-08;1!CL:0001024;3.80e-08;1!CL:0000542;3.88e-08;53!CL:0002032;4.82e-08;1!CL:0000557;4.82e-08;1!CL:0000946;1.69e-07;1!CL:0000786;1.69e-07;1|ontology_enrichment_celltype_v019_2=CL:0000945,1.74e-30,24;CL:0000826,1.74e-30,24;CL:0000037,2.53e-27,168;CL:0002032,1.98e-26,161;CL:0000837,1.98e-26,161;CL:0000988,1.09e-25,177;CL:0000542,2.62e-15,53;CL:0000051,2.62e-15,53;CL:0001014,8.43e-15,2;CL:0001016,8.43e-15,2;CL:0000838,5.23e-13,52;CL:0000763,5.32e-12,108;CL:0000049,5.32e-12,108;CL:0002031,1.69e-10,120;CL:0000134,2.73e-10,354;CL:0000738,2.85e-10,136;CL:0002320,5.48e-10,361;CL:0002087,1.57e-09,115;CL:0000034,6.18e-09,441;CL:0000219,6.38e-09,386;CL:0001024,3.80e-08,1;CL:0000048,1.29e-07,427;CL:0000723,1.96e-07,433;CL:0000946,1.99e-07,1;CL:0000786,1.99e-07,1;CL:0000980,1.99e-07,1|ontology_enrichment_development_v019=CL:0000051;3.88e-08;53|ontology_enrichment_disease=DOID:2531!1.02e-29!51;DOID:0060083!1.02e-29!51;DOID:8692!6.69e-28!31;DOID:1240!3.72e-24!39;DOID:0060058!2.58e-08!10;DOID:74!2.09e-07!2;DOID:0050686!2.48e-07!137|ontology_enrichment_disease_v019=DOID:8692;1.55e-30;31!DOID:1240;7.15e-24;39!DOID:2531;1.35e-19;51!DOID:0060083;1.35e-19;51!DOID:0060058;1.80e-10;10!DOID:630;3.10e-08;1!DOID:0050177;3.10e-08;1!DOID:0050427;3.10e-08;1!DOID:12603;4.07e-08;1!DOID:2355;1.69e-07;1|ontology_enrichment_disease_v019_2=DOID:2531,3.47e-37,51;DOID:0060083,3.47e-37,51;DOID:8692,1.94e-32,31;DOID:1240,1.43e-29,39;DOID:0050686,1.83e-11,137;DOID:0060058,1.65e-10,10;DOID:630,3.10e-08,1;DOID:0050177,3.10e-08,1;DOID:0050427,3.10e-08,1;DOID:12603,4.07e-08,1;DOID:2355,1.54e-07,1|ontology_enrichment_uberon=UBERON:0002384!2.93e-08!375;UBERON:0004177!4.22e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42535180810454,5.99334302984604,4.09296062831132,0,0.383829398097213,0,0,0,0,17.5850545317285,2.84338464974843,8.22081230137572,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,1.12101712596307,6.58460211937693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.24632382990303,0,0,0,0.798317485731266,1.34053759092657,0.846694330895531,0.649243880549111,4.21195767170188,2.73881614839831,0.47003968731907,2.50634477090067,0,5.29940647842208,1.81619736471943,6.81353980304522,13.7402137902306,4.91585222893533,3.57881772627865,3.17013369252626,3.71237381263877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15424027305347,0,0,0,4.60415133204185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,19.797702456532,13.9284351820431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,2.80122976276061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19629543700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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:76349345..76349369,- | |||
|id=chr15:76349345..76349369,- | |||
|ontology_enrichment_celltype=CL:0000037!9.44e-31!172;CL:0000566!9.44e-31!172;CL:0002032!4.68e-29!165;CL:0000837!4.68e-29!165;CL:0000988!1.85e-28!182;CL:0000945!5.97e-25!24;CL:0000826!5.97e-25!24;CL:0000763!4.49e-16!112;CL:0000049!4.49e-16!112;CL:0000738!1.07e-13!140;CL:0000542!1.28e-12!53;CL:0000051!1.28e-12!53;CL:0002031!1.32e-12!124;CL:0002087!4.05e-12!119;CL:0000838!3.73e-11!52;CL:0000134!3.79e-09!358;CL:0002320!9.02e-09!365;CL:0001014!1.67e-08!2;CL:0001016!1.67e-08!2;CL:0000219!1.88e-07!390;CL:0000034!5.32e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.66e-30;24!CL:0001014;8.72e-15;2!CL:0001016;8.72e-15;2!CL:0000037;3.80e-08;1!CL:0001024;3.80e-08;1!CL:0000542;3.88e-08;53!CL:0002032;4.82e-08;1!CL:0000557;4.82e-08;1!CL:0000946;1.69e-07;1!CL:0000786;1.69e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.74e-30,24;CL:0000826,1.74e-30,24;CL:0000037,2.53e-27,168;CL:0002032,1.98e-26,161;CL:0000837,1.98e-26,161;CL:0000988,1.09e-25,177;CL:0000542,2.62e-15,53;CL:0000051,2.62e-15,53;CL:0001014,8.43e-15,2;CL:0001016,8.43e-15,2;CL:0000838,5.23e-13,52;CL:0000763,5.32e-12,108;CL:0000049,5.32e-12,108;CL:0002031,1.69e-10,120;CL:0000134,2.73e-10,354;CL:0000738,2.85e-10,136;CL:0002320,5.48e-10,361;CL:0002087,1.57e-09,115;CL:0000034,6.18e-09,441;CL:0000219,6.38e-09,386;CL:0001024,3.80e-08,1;CL:0000048,1.29e-07,427;CL:0000723,1.96e-07,433;CL:0000946,1.99e-07,1;CL:0000786,1.99e-07,1;CL:0000980,1.99e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.88e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!1.02e-29!51;DOID:0060083!1.02e-29!51;DOID:8692!6.69e-28!31;DOID:1240!3.72e-24!39;DOID:0060058!2.58e-08!10;DOID:74!2.09e-07!2;DOID:0050686!2.48e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.55e-30;31!DOID:1240;7.15e-24;39!DOID:2531;1.35e-19;51!DOID:0060083;1.35e-19;51!DOID:0060058;1.80e-10;10!DOID:630;3.10e-08;1!DOID:0050177;3.10e-08;1!DOID:0050427;3.10e-08;1!DOID:12603;4.07e-08;1!DOID:2355;1.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.47e-37,51;DOID:0060083,3.47e-37,51;DOID:8692,1.94e-32,31;DOID:1240,1.43e-29,39;DOID:0050686,1.83e-11,137;DOID:0060058,1.65e-10,10;DOID:630,3.10e-08,1;DOID:0050177,3.10e-08,1;DOID:0050427,3.10e-08,1;DOID:12603,4.07e-08,1;DOID:2355,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.93e-08!375;UBERON:0004177!4.22e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42535180810454,5.99334302984604,4.09296062831132,0,0.383829398097213,0,0,0,0,17.5850545317285,2.84338464974843,8.22081230137572,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,1.12101712596307,6.58460211937693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.24632382990303,0,0,0,0.798317485731266,1.34053759092657,0.846694330895531,0.649243880549111,4.21195767170188,2.73881614839831,0.47003968731907,2.50634477090067,0,5.29940647842208,1.81619736471943,6.81353980304522,13.7402137902306,4.91585222893533,3.57881772627865,3.17013369252626,3.71237381263877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15424027305347,0,0,0,4.60415133204185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,19.797702456532,13.9284351820431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,2.80122976276061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,15.7078561228584 | |||
|short_description=p@chr15:76349345..76349369,- | |||
}} |
Revision as of 08:20, 11 September 2013
Short description: | p@chr15:76349345..76349369, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:76349345..76349369, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.74e-30 | 24 |
pro-B cell | 1.74e-30 | 24 |
hematopoietic stem cell | 2.53e-27 | 168 |
hematopoietic oligopotent progenitor cell | 1.98e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-26 | 161 |
hematopoietic cell | 1.09e-25 | 177 |
lymphocyte | 2.62e-15 | 53 |
common lymphoid progenitor | 2.62e-15 | 53 |
CD1a-positive Langerhans cell | 8.43e-15 | 2 |
immature CD1a-positive Langerhans cell | 8.43e-15 | 2 |
lymphoid lineage restricted progenitor cell | 5.23e-13 | 52 |
myeloid cell | 5.32e-12 | 108 |
common myeloid progenitor | 5.32e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.69e-10 | 120 |
mesenchymal cell | 2.73e-10 | 354 |
leukocyte | 2.85e-10 | 136 |
connective tissue cell | 5.48e-10 | 361 |
nongranular leukocyte | 1.57e-09 | 115 |
stem cell | 6.18e-09 | 441 |
motile cell | 6.38e-09 | 386 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.80e-08 | 1 |
multi fate stem cell | 1.29e-07 | 427 |
somatic stem cell | 1.96e-07 | 433 |
antibody secreting cell | 1.99e-07 | 1 |
plasma cell | 1.99e-07 | 1 |
plasmablast | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.42e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.47e-37 | 51 |
immune system cancer | 3.47e-37 | 51 |
myeloid leukemia | 1.94e-32 | 31 |
leukemia | 1.43e-29 | 39 |
organ system cancer | 1.83e-11 | 137 |
lymphoma | 1.65e-10 | 10 |
genetic disease | 3.10e-08 | 1 |
monogenic disease | 3.10e-08 | 1 |
xeroderma pigmentosum | 3.10e-08 | 1 |
acute leukemia | 4.07e-08 | 1 |
anemia | 1.54e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.