FFCP PHASE1:Hg19::chr16:29675072..29675091,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6693|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11249|TSSclassifier=S|UniProt=|association_with_transcript=22bp_to_AB464706,DQ892262,DQ895464_5end|description=CAGE_peak_9_at_SPN_5end|id=chr16:29675072..29675091,+|ontology_enrichment_celltype=CL:0000037!1.11e-57!172;CL:0000566!1.11e-57!172;CL:0002032!2.44e-53!165;CL:0000837!2.44e-53!165;CL:0000988!6.31e-53!182;CL:0000763!6.05e-39!112;CL:0000049!6.05e-39!112;CL:0000738!1.39e-31!140;CL:0002031!1.17e-30!124;CL:0002087!2.67e-28!119;CL:0000839!9.08e-17!70;CL:0000557!1.04e-16!71;CL:0002009!2.10e-15!65;CL:0000134!3.33e-15!358;CL:0002320!2.06e-14!365;CL:0002194!1.41e-13!63;CL:0000576!1.41e-13!63;CL:0000040!1.41e-13!63;CL:0000559!1.41e-13!63;CL:0000766!1.68e-13!76;CL:0000542!1.97e-12!53;CL:0000051!1.97e-12!53;CL:0000838!8.80e-12!52;CL:0000219!1.15e-11!390;CL:0002393!4.10e-10!9;CL:0002397!4.10e-10!9;CL:0000990!4.31e-10!8;CL:0000840!4.57e-10!5;CL:0001029!4.57e-10!5;CL:0002057!7.65e-10!42;CL:0000084!1.79e-09!25;CL:0000827!1.79e-09!25;CL:0000048!6.32e-09!430;CL:0000034!6.81e-09!444;CL:0000860!8.29e-09!45;CL:0000723!1.78e-08!436;CL:0000451!6.23e-08!10|ontology_enrichment_celltype_v019=CL:0000840;1.06e-11;5!CL:0000990;5.91e-08;8|ontology_enrichment_celltype_v019_2=CL:0000037,2.84e-13,168;CL:0000988,2.08e-12,177;CL:0000840,1.40e-11,5;CL:0001029,1.40e-11,5;CL:0002032,6.63e-11,161;CL:0000837,6.63e-11,161;CL:0000763,3.66e-10,108;CL:0000049,3.66e-10,108;CL:0000990,7.08e-08,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1240!6.42e-37!39;DOID:2531!6.00e-35!51;DOID:0060083!6.00e-35!51;DOID:8692!1.75e-30!31;DOID:1036!5.85e-09!8;DOID:0050686!8.94e-07!137|ontology_enrichment_disease_v019=DOID:8692;3.97e-21;31!DOID:1240;4.38e-16;39!DOID:2531;4.46e-11;51!DOID:0060083;4.46e-11;51!DOID:630;1.83e-08;1!DOID:0050177;1.83e-08;1!DOID:0050427;1.83e-08;1!DOID:8552;1.83e-08;1|ontology_enrichment_disease_v019_2=DOID:8692,2.79e-21,31;DOID:1240,2.98e-20,39;DOID:2531,4.69e-18,51;DOID:0060083,4.69e-18,51;DOID:630,9.46e-09,1;DOID:0050177,9.46e-09,1;DOID:0050427,9.46e-09,1;DOID:8552,2.13e-08,1|ontology_enrichment_uberon=UBERON:0002390!3.72e-25!102;UBERON:0003061!3.72e-25!102;UBERON:0002193!1.20e-22!112;UBERON:0002371!1.39e-15!80;UBERON:0002405!4.84e-14!115;UBERON:0001474!9.67e-14!86;UBERON:0002384!2.43e-13!375;UBERON:0004765!3.64e-10!101;UBERON:0001434!3.64e-10!101;UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15|ontology_enrichment_uberon_v019=UBERON:0002171;1.83e-08;1!UBERON:0006518;1.83e-08;1!UBERON:0008949;1.83e-08;1!UBERON:0000101;1.83e-08;1!UBERON:0002167;1.83e-08;1!UBERON:0000178;7.03e-08;15!UBERON:0000179;7.03e-08;15!UBERON:0000463;7.03e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.98e-08,1;UBERON:0006518,1.98e-08,1;UBERON:0008949,1.98e-08,1;UBERON:0000101,1.98e-08,1;UBERON:0002167,1.98e-08,1;UBERON:0000178,5.87e-08,15;UBERON:0000179,5.87e-08,15;UBERON:0000463,5.87e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.821005894499457,0.472264687882075,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.802177789880567,0.217010870715852,0,0,0,0.290796477559129,0.755751887377619,0.485168122375632,0.464858073811369,0.411167888021826,0,0.575384784644301,0.256160706529101,0,0,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0.659702600373432,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0.845021145247767,0.850417199860174,0.209658645508376,0,0.150176892841506,0,0.855038231223746,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,1.05353633910031,0,0.393010762749165,0.205601498999509,0.501559486172034,0,0.473447805734733,0,0.334231370655521,0.294605907474837,0,1.08321545506006,1.0247305578054,0.390178042679635,0.328875809207352,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0.651083453856419,0,0.150575119077773,0.76791966692651,0,0,0,0.201606743224732,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,1.0447784237956,4.25465473660369,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.792435906119034,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.591092280605782,2.15627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.94142780736755,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11249 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=22bp_to_AB464706,DQ892262,DQ895464_5end | |||
|description=CAGE_peak_9_at_SPN_5end | |||
|id=chr16:29675072..29675091,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.11e-57!172;CL:0000566!1.11e-57!172;CL:0002032!2.44e-53!165;CL:0000837!2.44e-53!165;CL:0000988!6.31e-53!182;CL:0000763!6.05e-39!112;CL:0000049!6.05e-39!112;CL:0000738!1.39e-31!140;CL:0002031!1.17e-30!124;CL:0002087!2.67e-28!119;CL:0000839!9.08e-17!70;CL:0000557!1.04e-16!71;CL:0002009!2.10e-15!65;CL:0000134!3.33e-15!358;CL:0002320!2.06e-14!365;CL:0002194!1.41e-13!63;CL:0000576!1.41e-13!63;CL:0000040!1.41e-13!63;CL:0000559!1.41e-13!63;CL:0000766!1.68e-13!76;CL:0000542!1.97e-12!53;CL:0000051!1.97e-12!53;CL:0000838!8.80e-12!52;CL:0000219!1.15e-11!390;CL:0002393!4.10e-10!9;CL:0002397!4.10e-10!9;CL:0000990!4.31e-10!8;CL:0000840!4.57e-10!5;CL:0001029!4.57e-10!5;CL:0002057!7.65e-10!42;CL:0000084!1.79e-09!25;CL:0000827!1.79e-09!25;CL:0000048!6.32e-09!430;CL:0000034!6.81e-09!444;CL:0000860!8.29e-09!45;CL:0000723!1.78e-08!436;CL:0000451!6.23e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.06e-11;5!CL:0000990;5.91e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.84e-13,168;CL:0000988,2.08e-12,177;CL:0000840,1.40e-11,5;CL:0001029,1.40e-11,5;CL:0002032,6.63e-11,161;CL:0000837,6.63e-11,161;CL:0000763,3.66e-10,108;CL:0000049,3.66e-10,108;CL:0000990,7.08e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!6.42e-37!39;DOID:2531!6.00e-35!51;DOID:0060083!6.00e-35!51;DOID:8692!1.75e-30!31;DOID:1036!5.85e-09!8;DOID:0050686!8.94e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.97e-21;31!DOID:1240;4.38e-16;39!DOID:2531;4.46e-11;51!DOID:0060083;4.46e-11;51!DOID:630;1.83e-08;1!DOID:0050177;1.83e-08;1!DOID:0050427;1.83e-08;1!DOID:8552;1.83e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.79e-21,31;DOID:1240,2.98e-20,39;DOID:2531,4.69e-18,51;DOID:0060083,4.69e-18,51;DOID:630,9.46e-09,1;DOID:0050177,9.46e-09,1;DOID:0050427,9.46e-09,1;DOID:8552,2.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.72e-25!102;UBERON:0003061!3.72e-25!102;UBERON:0002193!1.20e-22!112;UBERON:0002371!1.39e-15!80;UBERON:0002405!4.84e-14!115;UBERON:0001474!9.67e-14!86;UBERON:0002384!2.43e-13!375;UBERON:0004765!3.64e-10!101;UBERON:0001434!3.64e-10!101;UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.83e-08;1!UBERON:0006518;1.83e-08;1!UBERON:0008949;1.83e-08;1!UBERON:0000101;1.83e-08;1!UBERON:0002167;1.83e-08;1!UBERON:0000178;7.03e-08;15!UBERON:0000179;7.03e-08;15!UBERON:0000463;7.03e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.98e-08,1;UBERON:0006518,1.98e-08,1;UBERON:0008949,1.98e-08,1;UBERON:0000101,1.98e-08,1;UBERON:0002167,1.98e-08,1;UBERON:0000178,5.87e-08,15;UBERON:0000179,5.87e-08,15;UBERON:0000463,5.87e-08,15 | |||
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|short_description=p9@SPN | |||
}} |
Revision as of 10:00, 11 September 2013
Short description: | p9@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_AB464706, DQ892262, DQ895464_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.84e-13 | 168 |
hematopoietic cell | 2.08e-12 | 177 |
immature conventional dendritic cell | 1.40e-11 | 5 |
common dendritic progenitor | 1.40e-11 | 5 |
hematopoietic oligopotent progenitor cell | 6.63e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.63e-11 | 161 |
myeloid cell | 3.66e-10 | 108 |
common myeloid progenitor | 3.66e-10 | 108 |
conventional dendritic cell | 7.08e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.98e-08 | 1 |
right lung lobe | 1.98e-08 | 1 |
lower lobe of lung | 1.98e-08 | 1 |
lobe of lung | 1.98e-08 | 1 |
right lung | 1.98e-08 | 1 |
blood | 5.87e-08 | 15 |
haemolymphatic fluid | 5.87e-08 | 15 |
organism substance | 5.87e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.79e-21 | 31 |
leukemia | 2.98e-20 | 39 |
hematologic cancer | 4.69e-18 | 51 |
immune system cancer | 4.69e-18 | 51 |
genetic disease | 9.46e-09 | 1 |
monogenic disease | 9.46e-09 | 1 |
xeroderma pigmentosum | 9.46e-09 | 1 |
chronic myeloid leukemia | 2.13e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.