FFCP PHASE1:Hg19::chr16:53088879..53088884,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80205|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25701|TSSclassifier=S|UniProt=Q3L8U1,Q461N2|association_with_transcript=-60bp_to_ENST00000398510,ENST00000447540,NM_025134,uc002egy.2_5end|description=CAGE_peak_11_at_CHD9_5end|id=chr16:53088879..53088884,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002032;4.27e-34;1!CL:0000557;4.27e-34;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;1.38e-09;4|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002369;2.45e-12;3!UBERON:0001235;2.45e-12;3!UBERON:0006858;2.45e-12;3|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.85e-12,3;UBERON:0001235,1.85e-12,3;UBERON:0006858,1.85e-12,3|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0.164201178899891,0.393553906568396,0,0,0,0,0.30120591877825,0,0.387336002901508,0,0,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0.985326475791887,0.264145302039678,0.829312462163088,0.864719720501769,0.6312121671319,0.253991577168676,0,0,0,0.205654985406647,0,0.571652865261156,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0.308097234229289,0,0,0.322260734604821,0.145016693914229,0.170453254832202,0.534192213880424,0,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.213425530045242,0,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0.278406173895242,1.23087398947712,0,0,0,0.18714054040822,0.439524537815682,1.94176834799221,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0.844501632511974,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0.236387681767936,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.384751292518985,0.227884111694002,0.46112780877612,0,0.108647371922008,0,0,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0.189753732724185,0,0.421996129056054,0,0,0.216388639742091,0,0.0884575645033392,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0.802577647298789,0,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |||
|TSSclassifier=S | |||
|UniProt=Q3L8U1,Q461N2 | |||
|association_with_transcript=-60bp_to_ENST00000398510,ENST00000447540,NM_025134,uc002egy.2_5end | |||
|description=CAGE_peak_11_at_CHD9_5end | |||
|id=chr16:53088879..53088884,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;4.27e-34;1!CL:0000557;4.27e-34;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;2.45e-12;3!UBERON:0001235;2.45e-12;3!UBERON:0006858;2.45e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.85e-12,3;UBERON:0001235,1.85e-12,3;UBERON:0006858,1.85e-12,3 | |||
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| |||
|short_description=p11@CHD9 | |||
}} |
Revision as of 10:41, 11 September 2013
Short description: | p11@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000398510, ENST00000447540, NM_025134, uc002egy.2_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q3L8U1Q461N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.85e-12 | 3 |
adrenal cortex | 1.85e-12 | 3 |
adrenal/interrenal gland | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.