FFCP PHASE1:Hg19::chr16:71610985..71610999,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6898|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11573|TSSclassifier=W|UniProt=P17735,Q8WW92|association_with_transcript=0bp_to_NM_000353,uc002fap.2,uc002faq.2,uc002far.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_TAT_5end|id=chr16:71610985..71610999,-|ontology_enrichment_celltype=CL:0000181!2.31e-22!12;CL:0000417!2.31e-22!12;CL:0000668!2.31e-22!12;CL:0000414!2.31e-22!12;CL:0000412!2.31e-22!12;CL:0000182!2.31e-22!12|ontology_enrichment_celltype_v019=CL:0000182;2.51e-14;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.51e-14,12|ontology_enrichment_development_v019=UBERON:0004161;1.42e-07;11|ontology_enrichment_disease=DOID:114!1.25e-12!2;DOID:178!4.01e-07!1;DOID:326!4.01e-07!1;DOID:3978!4.01e-07!1;DOID:3394!4.01e-07!1;DOID:5844!4.01e-07!1|ontology_enrichment_disease_v019=DOID:114;3.27e-10;2|ontology_enrichment_disease_v019_2=DOID:114,3.27e-10,2|ontology_enrichment_uberon=UBERON:0005057!2.36e-24!26;UBERON:0002107!5.67e-23!19;UBERON:0006925!5.67e-23!19;UBERON:0008836!5.67e-23!19;UBERON:0009497!4.90e-21!25;UBERON:0000015!4.90e-21!25;UBERON:0002423!4.90e-21!25;UBERON:0006235!4.90e-21!25;UBERON:0004161!4.90e-21!25;UBERON:0008835!1.24e-19!22;UBERON:0003894!1.24e-19!22;UBERON:0009854!1.03e-18!23;UBERON:0003929!1.56e-17!54;UBERON:0002368!1.85e-17!35;UBERON:0005172!4.02e-17!55;UBERON:0005173!4.02e-17!55;UBERON:0007499!4.30e-17!25;UBERON:0009856!2.24e-16!26;UBERON:0002417!3.76e-15!61;UBERON:0000916!3.76e-15!61;UBERON:0002365!1.73e-13!31;UBERON:0002330!1.73e-13!31;UBERON:0000949!4.11e-13!45;UBERON:0005911!3.25e-12!82;UBERON:0002530!1.97e-11!59;UBERON:0009569!2.61e-09!113;UBERON:0005177!1.27e-08!107;UBERON:0006122!3.17e-07!1;UBERON:0001041!4.62e-07!98;UBERON:0002146!5.06e-07!1;UBERON:0005623!5.06e-07!1;UBERON:0007190!8.49e-07!1;UBERON:0001007!9.61e-07!155;UBERON:0001555!9.61e-07!155;UBERON:0007026!9.61e-07!155|ontology_enrichment_uberon_v019=UBERON:0002107;5.10e-24;19!UBERON:0006925;5.10e-24;19!UBERON:0002423;2.65e-18;25!UBERON:0002365;9.25e-15;31!UBERON:0002330;9.25e-15;31!UBERON:0002368;8.78e-13;33!UBERON:0000949;2.38e-09;43!UBERON:0005172;8.01e-07;52!UBERON:0005173;8.01e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.10e-24,19;UBERON:0006925,5.10e-24,19;UBERON:0008836,5.10e-24,19;UBERON:0008835,8.99e-21,22;UBERON:0003894,8.99e-21,22;UBERON:0009854,7.05e-20,23;UBERON:0007499,2.65e-18,25;UBERON:0009497,2.65e-18,25;UBERON:0000015,2.65e-18,25;UBERON:0002423,2.65e-18,25;UBERON:0006235,2.65e-18,25;UBERON:0004161,2.65e-18,25;UBERON:0009856,1.32e-17,26;UBERON:0002365,8.65e-15,31;UBERON:0002330,8.65e-15,31;UBERON:0002368,4.11e-13,35;UBERON:0000949,3.24e-10,45;UBERON:0003929,1.61e-08,54;UBERON:0005172,1.61e-08,54;UBERON:0005173,1.61e-08,54;UBERON:0002530,8.47e-08,59;UBERON:0002417,1.14e-07,60;UBERON:0000916,1.14e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2128.21703465854,203.445233852269,1430.89315398236,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,852.561330373254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,863.110365521511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,10.8749936315219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.798716001995964,1.71690419254628,0,0,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,2600.56938661757,131.181820023099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,0,0,0,0,0,0.186224142887574,0,0.12729431655633,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@TAT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11573 | |||
|TSSclassifier=W | |||
|UniProt=P17735,Q8WW92 | |||
|association_with_transcript=0bp_to_NM_000353,uc002fap.2,uc002faq.2,uc002far.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_TAT_5end | |||
|id=chr16:71610985..71610999,- | |||
|ontology_enrichment_celltype=CL:0000181!2.31e-22!12;CL:0000417!2.31e-22!12;CL:0000668!2.31e-22!12;CL:0000414!2.31e-22!12;CL:0000412!2.31e-22!12;CL:0000182!2.31e-22!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.51e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.51e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.42e-07;11 | |||
|ontology_enrichment_disease=DOID:114!1.25e-12!2;DOID:178!4.01e-07!1;DOID:326!4.01e-07!1;DOID:3978!4.01e-07!1;DOID:3394!4.01e-07!1;DOID:5844!4.01e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;3.27e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.36e-24!26;UBERON:0002107!5.67e-23!19;UBERON:0006925!5.67e-23!19;UBERON:0008836!5.67e-23!19;UBERON:0009497!4.90e-21!25;UBERON:0000015!4.90e-21!25;UBERON:0002423!4.90e-21!25;UBERON:0006235!4.90e-21!25;UBERON:0004161!4.90e-21!25;UBERON:0008835!1.24e-19!22;UBERON:0003894!1.24e-19!22;UBERON:0009854!1.03e-18!23;UBERON:0003929!1.56e-17!54;UBERON:0002368!1.85e-17!35;UBERON:0005172!4.02e-17!55;UBERON:0005173!4.02e-17!55;UBERON:0007499!4.30e-17!25;UBERON:0009856!2.24e-16!26;UBERON:0002417!3.76e-15!61;UBERON:0000916!3.76e-15!61;UBERON:0002365!1.73e-13!31;UBERON:0002330!1.73e-13!31;UBERON:0000949!4.11e-13!45;UBERON:0005911!3.25e-12!82;UBERON:0002530!1.97e-11!59;UBERON:0009569!2.61e-09!113;UBERON:0005177!1.27e-08!107;UBERON:0006122!3.17e-07!1;UBERON:0001041!4.62e-07!98;UBERON:0002146!5.06e-07!1;UBERON:0005623!5.06e-07!1;UBERON:0007190!8.49e-07!1;UBERON:0001007!9.61e-07!155;UBERON:0001555!9.61e-07!155;UBERON:0007026!9.61e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.10e-24;19!UBERON:0006925;5.10e-24;19!UBERON:0002423;2.65e-18;25!UBERON:0002365;9.25e-15;31!UBERON:0002330;9.25e-15;31!UBERON:0002368;8.78e-13;33!UBERON:0000949;2.38e-09;43!UBERON:0005172;8.01e-07;52!UBERON:0005173;8.01e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.10e-24,19;UBERON:0006925,5.10e-24,19;UBERON:0008836,5.10e-24,19;UBERON:0008835,8.99e-21,22;UBERON:0003894,8.99e-21,22;UBERON:0009854,7.05e-20,23;UBERON:0007499,2.65e-18,25;UBERON:0009497,2.65e-18,25;UBERON:0000015,2.65e-18,25;UBERON:0002423,2.65e-18,25;UBERON:0006235,2.65e-18,25;UBERON:0004161,2.65e-18,25;UBERON:0009856,1.32e-17,26;UBERON:0002365,8.65e-15,31;UBERON:0002330,8.65e-15,31;UBERON:0002368,4.11e-13,35;UBERON:0000949,3.24e-10,45;UBERON:0003929,1.61e-08,54;UBERON:0005172,1.61e-08,54;UBERON:0005173,1.61e-08,54;UBERON:0002530,8.47e-08,59;UBERON:0002417,1.14e-07,60;UBERON:0000916,1.14e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2128.21703465854,203.445233852269,1430.89315398236,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,852.561330373254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,863.110365521511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,10.8749936315219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.798716001995964,1.71690419254628,0,0,0,0,0.157566364614447,0.247247575143499,0.26961417541674,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,2600.56938661757,131.181820023099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,0,0,0,0,0,0.186224142887574,0,0.12729431655633,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@TAT | |||
}} |
Revision as of 11:25, 11 September 2013
Short description: | p1@TAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TAT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_000353, uc002fap.2, uc002faq.2, uc002far.2_5end |
EntrezGene: | TAT |
HGNC: | 11573 |
UniProt: | P17735Q8WW92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.51e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.10e-24 | 19 |
digestive gland | 5.10e-24 | 19 |
liver bud | 5.10e-24 | 19 |
hepatic diverticulum | 8.99e-21 | 22 |
liver primordium | 8.99e-21 | 22 |
digestive tract diverticulum | 7.05e-20 | 23 |
epithelial sac | 2.65e-18 | 25 |
epithelium of foregut-midgut junction | 2.65e-18 | 25 |
anatomical boundary | 2.65e-18 | 25 |
hepatobiliary system | 2.65e-18 | 25 |
foregut-midgut junction | 2.65e-18 | 25 |
septum transversum | 2.65e-18 | 25 |
sac | 1.32e-17 | 26 |
exocrine gland | 8.65e-15 | 31 |
exocrine system | 8.65e-15 | 31 |
endocrine gland | 4.11e-13 | 35 |
endocrine system | 3.24e-10 | 45 |
gut epithelium | 1.61e-08 | 54 |
abdomen element | 1.61e-08 | 54 |
abdominal segment element | 1.61e-08 | 54 |
gland | 8.47e-08 | 59 |
abdominal segment of trunk | 1.14e-07 | 60 |
abdomen | 1.14e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.27e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.