FFCP PHASE1:Hg19::chr17:41464780..41464786,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10154|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000411012_5end|description=CAGE_peak_1_at_RNU2-4P_5end|id=chr17:41464780..41464786,-|ontology_enrichment_celltype=CL:0000860!5.38e-07!45|ontology_enrichment_celltype_v019=CL:0000322;3.17e-07;3!CL:0002623;3.17e-07;3|ontology_enrichment_celltype_v019_2=CL:0002623,2.15e-07,3;CL:0000322,4.13e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!2.43e-12!143;DOID:162!4.82e-12!235;DOID:14566!1.30e-11!239;DOID:305!5.55e-09!106|ontology_enrichment_disease_v019=DOID:1325;1.17e-16;7!DOID:3904;1.17e-16;7!DOID:3910;1.95e-10;2!DOID:3905;1.29e-08;9!DOID:1324;1.27e-07;15!DOID:0050615;3.98e-07;16|ontology_enrichment_disease_v019_2=DOID:1325,6.65e-17,7;DOID:3904,6.65e-17,7;DOID:3910,2.92e-10,2;DOID:3905,1.15e-08,9;DOID:1324,9.91e-08,15;DOID:305,1.00e-07,106;DOID:0050615,3.16e-07,16|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;1.95e-10;2!UBERON:0002173;1.95e-10;2!UBERON:0002186;1.95e-10;2!UBERON:0004821;3.17e-07;3!UBERON:0007499;3.17e-07;3!UBERON:0003215;3.17e-07;3!UBERON:0010368;3.17e-07;3!UBERON:0009911;3.17e-07;3!UBERON:0002299;3.17e-07;3!UBERON:0006524;3.17e-07;3!UBERON:0008874;3.17e-07;3!UBERON:0002169;3.17e-07;3!UBERON:0004894;3.17e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.92e-10,2;UBERON:0002173,2.92e-10,2;UBERON:0002186,2.92e-10,2;UBERON:0004821,4.13e-07,3;UBERON:0003215,4.13e-07,3;UBERON:0010368,4.13e-07,3;UBERON:0009911,4.13e-07,3;UBERON:0002299,4.13e-07,3;UBERON:0006524,4.13e-07,3;UBERON:0008874,4.13e-07,3;UBERON:0002169,4.13e-07,3;UBERON:0004894,4.13e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.492603536699674,0.708397031823113,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,1.20326668482085,0.217010870715852,0,0,0,0.581592955118259,0,0.242584061187816,0.929716147622738,0.411167888021826,0.619412741790207,2.01384674625505,1.2808035326455,0.709446689665756,1.37898272294647,0,0,0.941211697713023,0.272906150057846,0.224723484445085,1.22433556948361,0,0,0.989553900560148,0.598390972864896,0,0.290209238628584,1.13477044938228,0.622822248995575,0.75374599577023,0,0,0.605399502633369,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.768547918354051,0.910415432919148,0.164437904603676,1.10540007114339,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0.443458794925128,0.351339142772504,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.530119073285941,0.580969714347592,0.207322110030741,0.756962552626885,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,3.1608175918371,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0.513372145118994,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,2.00068208423871,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.368738337083406,0,0.195801157462741,0,0,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0.368323955743585,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0.386682873168488,0.308097234229289,0.307007349452259,0.137836572484531,0.107420244868274,0,0,0,0,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0.136499911407986,0.565621727814851,0,0,0,0,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0.670302275535787,0,0.188287601553558,0,1.6847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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10154 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000411012_5end | |||
|description=CAGE_peak_1_at_RNU2-4P_5end | |||
|id=chr17:41464780..41464786,- | |||
|ontology_enrichment_celltype=CL:0000860!5.38e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000322;3.17e-07;3!CL:0002623;3.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.15e-07,3;CL:0000322,4.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.43e-12!143;DOID:162!4.82e-12!235;DOID:14566!1.30e-11!239;DOID:305!5.55e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1325;1.17e-16;7!DOID:3904;1.17e-16;7!DOID:3910;1.95e-10;2!DOID:3905;1.29e-08;9!DOID:1324;1.27e-07;15!DOID:0050615;3.98e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,6.65e-17,7;DOID:3904,6.65e-17,7;DOID:3910,2.92e-10,2;DOID:3905,1.15e-08,9;DOID:1324,9.91e-08,15;DOID:305,1.00e-07,106;DOID:0050615,3.16e-07,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.95e-10;2!UBERON:0002173;1.95e-10;2!UBERON:0002186;1.95e-10;2!UBERON:0004821;3.17e-07;3!UBERON:0007499;3.17e-07;3!UBERON:0003215;3.17e-07;3!UBERON:0010368;3.17e-07;3!UBERON:0009911;3.17e-07;3!UBERON:0002299;3.17e-07;3!UBERON:0006524;3.17e-07;3!UBERON:0008874;3.17e-07;3!UBERON:0002169;3.17e-07;3!UBERON:0004894;3.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.92e-10,2;UBERON:0002173,2.92e-10,2;UBERON:0002186,2.92e-10,2;UBERON:0004821,4.13e-07,3;UBERON:0003215,4.13e-07,3;UBERON:0010368,4.13e-07,3;UBERON:0009911,4.13e-07,3;UBERON:0002299,4.13e-07,3;UBERON:0006524,4.13e-07,3;UBERON:0008874,4.13e-07,3;UBERON:0002169,4.13e-07,3;UBERON:0004894,4.13e-07,3 | |||
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| |||
|short_description=p1@RNU2-4P | |||
}} |
Revision as of 13:49, 11 September 2013
Short description: | p1@RNU2-4P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNU2-4P_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000411012_5end |
EntrezGene: | NA |
HGNC: | 10154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.15e-07 | 3 |
pneumocyte | 4.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.92e-10 | 2 |
alveolar duct | 2.92e-10 | 2 |
bronchiole | 2.92e-10 | 2 |
pulmonary alveolus epithelium | 4.13e-07 | 3 |
alveolus | 4.13e-07 | 3 |
pulmonary lobule | 4.13e-07 | 3 |
lobule | 4.13e-07 | 3 |
alveolus of lung | 4.13e-07 | 3 |
alveolar system | 4.13e-07 | 3 |
pulmonary acinus | 4.13e-07 | 3 |
alveolar sac | 4.13e-07 | 3 |
alveolar wall | 4.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 6.65e-17 | 7 |
bronchogenic carcinoma | 6.65e-17 | 7 |
lung adenocarcinoma | 2.92e-10 | 2 |
lung carcinoma | 1.15e-08 | 9 |
lung cancer | 9.91e-08 | 15 |
carcinoma | 1.00e-07 | 106 |
respiratory system cancer | 3.16e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.