FFCP PHASE1:Hg19::chr17:53809407..53809415,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55273|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25607|TSSclassifier=S|UniProt=Q9NV29|association_with_transcript=66bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end|coexpression_cluster_id=C308|description=CAGE_peak_6_at_TMEM100_5end|id=chr17:53809407..53809415,-|ontology_enrichment_celltype=CL:0002274!8.61e-08!5;CL:0000457!8.61e-08!5;CL:0002191!8.61e-08!5;CL:0000097!8.61e-08!5;CL:0000831!8.61e-08!5;CL:0002028!8.61e-08!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29!UBERON:0001041;6.09e-10;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.51e-10!115;UBERON:0002171!1.80e-10!1;UBERON:0006518!1.80e-10!1;UBERON:0008949!1.80e-10!1;UBERON:0000101!1.80e-10!1;UBERON:0002167!1.80e-10!1;UBERON:0000996!2.37e-10!1;UBERON:0000998!2.59e-10!1;UBERON:0006868!2.59e-10!1;UBERON:0001874!6.33e-10!1;UBERON:0002372!7.55e-10!1;UBERON:0001961!7.55e-10!1;UBERON:0001744!7.55e-10!1;UBERON:0001735!7.55e-10!1;UBERON:0006834!8.99e-10!1;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0002022!1.17e-09!1|ontology_enrichment_uberon_v019=UBERON:0002171;3.34e-66;1!UBERON:0006518;3.34e-66;1!UBERON:0008949;3.34e-66;1!UBERON:0000101;3.34e-66;1!UBERON:0002167;3.34e-66;1!UBERON:0002048;3.89e-13;22!UBERON:0000117;3.89e-13;22!UBERON:0000171;3.89e-13;22!UBERON:0000170;3.89e-13;22!UBERON:0005178;1.23e-08;34!UBERON:0002224;1.23e-08;34!UBERON:0005181;5.52e-08;35!UBERON:0000065;2.48e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0005157,9.72e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0579216775724,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0|short_description=p6@TMEM100}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55273 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25607 | |||
|TSSclassifier=S | |||
|UniProt=Q9NV29 | |||
|association_with_transcript=66bp_to_ENST00000299377,NM_001099640,uc002iuk.3_5end | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_6_at_TMEM100_5end | |||
|id=chr17:53809407..53809415,- | |||
|ontology_enrichment_celltype=CL:0002274!8.61e-08!5;CL:0000457!8.61e-08!5;CL:0002191!8.61e-08!5;CL:0000097!8.61e-08!5;CL:0000831!8.61e-08!5;CL:0002028!8.61e-08!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.03e-10;29!UBERON:0001041;6.09e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-10!115;UBERON:0002171!1.80e-10!1;UBERON:0006518!1.80e-10!1;UBERON:0008949!1.80e-10!1;UBERON:0000101!1.80e-10!1;UBERON:0002167!1.80e-10!1;UBERON:0000996!2.37e-10!1;UBERON:0000998!2.59e-10!1;UBERON:0006868!2.59e-10!1;UBERON:0001874!6.33e-10!1;UBERON:0002372!7.55e-10!1;UBERON:0001961!7.55e-10!1;UBERON:0001744!7.55e-10!1;UBERON:0001735!7.55e-10!1;UBERON:0006834!8.99e-10!1;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0002022!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.34e-66;1!UBERON:0006518;3.34e-66;1!UBERON:0008949;3.34e-66;1!UBERON:0000101;3.34e-66;1!UBERON:0002167;3.34e-66;1!UBERON:0002048;3.89e-13;22!UBERON:0000117;3.89e-13;22!UBERON:0000171;3.89e-13;22!UBERON:0000170;3.89e-13;22!UBERON:0005178;1.23e-08;34!UBERON:0002224;1.23e-08;34!UBERON:0005181;5.52e-08;35!UBERON:0000065;2.48e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.39e-66,1;UBERON:0006518,2.39e-66,1;UBERON:0008949,2.39e-66,1;UBERON:0000101,2.39e-66,1;UBERON:0002167,2.39e-66,1;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0005157,9.72e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0579216775724,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p6@TMEM100 | |||
}} |
Revision as of 14:40, 11 September 2013
Short description: | p6@TMEM100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TMEM100_5end |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | 66bp_to_ENST00000299377, NM_001099640, uc002iuk.3_5end |
EntrezGene: | TMEM100 |
HGNC: | 25607 |
UniProt: | Q9NV29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.39e-66 | 1 |
right lung lobe | 2.39e-66 | 1 |
lower lobe of lung | 2.39e-66 | 1 |
lobe of lung | 2.39e-66 | 1 |
right lung | 2.39e-66 | 1 |
lung | 3.77e-13 | 22 |
respiratory tube | 3.77e-13 | 22 |
respiration organ | 3.77e-13 | 22 |
pair of lungs | 3.77e-13 | 22 |
lung primordium | 3.77e-13 | 22 |
lung bud | 3.77e-13 | 22 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
epithelial bud | 2.82e-08 | 37 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
epithelial fold | 9.72e-07 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.