FFCP PHASE1:Hg19::chr18:21464608..21464649,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-85bp_to_X77598_5end|coexpression_cluster_id=C731|description=CAGE_peak_1_at_X77598_5end|id=chr18:21464608..21464649,+|ontology_enrichment_celltype=CL:0000136!1.96e-09!15;CL:0002615!1.86e-08!3|ontology_enrichment_celltype_v019=CL:0002615;1.64e-36;3!CL:0000136;8.90e-33;13!CL:0002617;5.58e-25;2!CL:0002616;2.62e-13;1!CL:0002581;7.68e-13;1!CL:0000047;4.69e-07;2|ontology_enrichment_celltype_v019_2=CL:0002615,1.85e-36,3;CL:0000136,2.33e-28,15;CL:0002617,5.58e-25,2;CL:0002616,2.62e-13,1;CL:0002581,5.38e-13,1|ontology_enrichment_development_v019=UBERON:0005062;1.03e-12;4!UBERON:0007284;1.03e-12;4!UBERON:0007297;4.69e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.57e-19!115;UBERON:0004457!2.09e-11!12;UBERON:0000042!2.09e-11!12;UBERON:0003688!3.56e-10!6;UBERON:0002358!3.56e-10!6;UBERON:0003684!3.56e-10!6;UBERON:0001178!3.56e-10!6;UBERON:0003978!9.98e-08!3;UBERON:0009751!9.98e-08!3;UBERON:0000946!9.98e-08!3;UBERON:0002523!9.98e-08!3;UBERON:0005983!9.98e-08!3;UBERON:0002165!9.98e-08!3;UBERON:0002062!9.98e-08!3;UBERON:0007280!9.98e-08!3|ontology_enrichment_uberon_v019=UBERON:0003688;7.68e-32;6!UBERON:0002358;7.68e-32;6!UBERON:0003684;7.68e-32;6!UBERON:0001178;7.68e-32;6!UBERON:0002133;2.08e-24;2!UBERON:0005406;2.34e-24;2!UBERON:0004457;2.34e-21;9!UBERON:0000042;2.34e-21;9!UBERON:0003978;1.27e-16;3!UBERON:0000946;1.27e-16;3!UBERON:0000029;2.95e-13;1!UBERON:0002135;3.76e-13;1!UBERON:0002134;4.77e-13;1!UBERON:0005208;4.77e-13;1!UBERON:0004145;4.77e-13;1!UBERON:0005946;4.77e-13;1!UBERON:0005965;4.77e-13;1!UBERON:0002078;4.77e-13;1!UBERON:0001301;7.68e-13;1!UBERON:0001013;4.59e-08;14!UBERON:0002081;3.70e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.32e-32,6;UBERON:0002358,8.32e-32,6;UBERON:0003684,8.32e-32,6;UBERON:0001178,8.32e-32,6;UBERON:0005406,1.64e-24,2;UBERON:0002133,2.08e-24,2;UBERON:0003978,1.27e-16,3;UBERON:0009751,1.27e-16,3;UBERON:0000946,1.27e-16,3;UBERON:0002523,1.27e-16,3;UBERON:0005983,1.27e-16,3;UBERON:0002165,1.27e-16,3;UBERON:0002062,1.27e-16,3;UBERON:0007280,1.27e-16,3;UBERON:0004457,4.42e-16,12;UBERON:0000042,4.42e-16,12;UBERON:0000029,2.95e-13,1;UBERON:0002135,3.76e-13,1;UBERON:0002134,4.77e-13,1;UBERON:0005208,4.77e-13,1;UBERON:0005946,4.77e-13,1;UBERON:0005965,4.77e-13,1;UBERON:0002078,4.77e-13,1;UBERON:0001301,8.64e-13,1;UBERON:0001013,4.59e-08,14;UBERON:0004797,1.21e-07,7;UBERON:0003886,1.80e-07,54;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2|phase1_expression=9.08391896352783,8.13581990785736,20.8612518062037,3.00219895059391,13.4088328328186,7.85104671690332,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,1.28139149255701,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,1.22308667769421,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,3.0721064139948,0.229160424011684,2.87149209830726,0,0,0.89268582976749,0.335917362433631,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.640724475406168,0,0.828478110694391,5.95399226174341,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,3.55924488638614,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.718639647993729,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.751871343838829,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,1.28823786971007,0,0,0,0.639701945702943,0.23806443146374,0,0.31037357147929,0,1.20929600728513,0.202117188958219,0.870866991587845,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0.201273793591026,0|short_description=p1@X77598}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-85bp_to_X77598_5end | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_1_at_X77598_5end | |||
|id=chr18:21464608..21464649,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.96e-09!15;CL:0002615!1.86e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.64e-36;3!CL:0000136;8.90e-33;13!CL:0002617;5.58e-25;2!CL:0002616;2.62e-13;1!CL:0002581;7.68e-13;1!CL:0000047;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.85e-36,3;CL:0000136,2.33e-28,15;CL:0002617,5.58e-25,2;CL:0002616,2.62e-13,1;CL:0002581,5.38e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.03e-12;4!UBERON:0007284;1.03e-12;4!UBERON:0007297;4.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-19!115;UBERON:0004457!2.09e-11!12;UBERON:0000042!2.09e-11!12;UBERON:0003688!3.56e-10!6;UBERON:0002358!3.56e-10!6;UBERON:0003684!3.56e-10!6;UBERON:0001178!3.56e-10!6;UBERON:0003978!9.98e-08!3;UBERON:0009751!9.98e-08!3;UBERON:0000946!9.98e-08!3;UBERON:0002523!9.98e-08!3;UBERON:0005983!9.98e-08!3;UBERON:0002165!9.98e-08!3;UBERON:0002062!9.98e-08!3;UBERON:0007280!9.98e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.68e-32;6!UBERON:0002358;7.68e-32;6!UBERON:0003684;7.68e-32;6!UBERON:0001178;7.68e-32;6!UBERON:0002133;2.08e-24;2!UBERON:0005406;2.34e-24;2!UBERON:0004457;2.34e-21;9!UBERON:0000042;2.34e-21;9!UBERON:0003978;1.27e-16;3!UBERON:0000946;1.27e-16;3!UBERON:0000029;2.95e-13;1!UBERON:0002135;3.76e-13;1!UBERON:0002134;4.77e-13;1!UBERON:0005208;4.77e-13;1!UBERON:0004145;4.77e-13;1!UBERON:0005946;4.77e-13;1!UBERON:0005965;4.77e-13;1!UBERON:0002078;4.77e-13;1!UBERON:0001301;7.68e-13;1!UBERON:0001013;4.59e-08;14!UBERON:0002081;3.70e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.32e-32,6;UBERON:0002358,8.32e-32,6;UBERON:0003684,8.32e-32,6;UBERON:0001178,8.32e-32,6;UBERON:0005406,1.64e-24,2;UBERON:0002133,2.08e-24,2;UBERON:0003978,1.27e-16,3;UBERON:0009751,1.27e-16,3;UBERON:0000946,1.27e-16,3;UBERON:0002523,1.27e-16,3;UBERON:0005983,1.27e-16,3;UBERON:0002165,1.27e-16,3;UBERON:0002062,1.27e-16,3;UBERON:0007280,1.27e-16,3;UBERON:0004457,4.42e-16,12;UBERON:0000042,4.42e-16,12;UBERON:0000029,2.95e-13,1;UBERON:0002135,3.76e-13,1;UBERON:0002134,4.77e-13,1;UBERON:0005208,4.77e-13,1;UBERON:0005946,4.77e-13,1;UBERON:0005965,4.77e-13,1;UBERON:0002078,4.77e-13,1;UBERON:0001301,8.64e-13,1;UBERON:0001013,4.59e-08,14;UBERON:0004797,1.21e-07,7;UBERON:0003886,1.80e-07,54;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2 | |||
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|short_description=p1@X77598 | |||
}} |
Revision as of 17:01, 11 September 2013
Short description: | p1@X77598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_X77598_5end |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | -85bp_to_X77598_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.85e-36 | 3 |
fat cell | 2.33e-28 | 15 |
adipocyte of breast | 5.58e-25 | 2 |
perirenal adipocyte cell | 2.62e-13 | 1 |
perirenal preadipocyte | 5.38e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.32e-32 | 6 |
peritoneum | 8.32e-32 | 6 |
abdominal cavity | 8.32e-32 | 6 |
visceral peritoneum | 8.32e-32 | 6 |
perirenal fat | 1.64e-24 | 2 |
atrioventricular valve | 2.08e-24 | 2 |
valve | 1.27e-16 | 3 |
cardiac mesenchyme | 1.27e-16 | 3 |
cardial valve | 1.27e-16 | 3 |
tunica intima | 1.27e-16 | 3 |
heart layer | 1.27e-16 | 3 |
endocardium | 1.27e-16 | 3 |
endocardial cushion | 1.27e-16 | 3 |
presumptive endocardium | 1.27e-16 | 3 |
cavity lining | 4.42e-16 | 12 |
serous membrane | 4.42e-16 | 12 |
lymph node | 2.95e-13 | 1 |
mitral valve | 3.76e-13 | 1 |
tricuspid valve | 4.77e-13 | 1 |
right atrium valve | 4.77e-13 | 1 |
outflow tract of atrium | 4.77e-13 | 1 |
outflow part of right atrium | 4.77e-13 | 1 |
right cardiac atrium | 4.77e-13 | 1 |
epididymis | 8.64e-13 | 1 |
adipose tissue | 4.59e-08 | 14 |
blood vessel layer | 1.21e-07 | 7 |
body cavity precursor | 1.80e-07 | 54 |
cardiac atrium | 3.70e-07 | 2 |
future cardiac atrium | 3.70e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.