FFCP PHASE1:Hg19::chr19:36393258..36393271,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10870|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16977|TSSclassifier=W|UniProt=Q9UBK5|association_with_transcript=-110bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end|coexpression_cluster_id=C80|description=CAGE_peak_6_at_HCST_5end|id=chr19:36393258..36393271,+|ontology_enrichment_celltype=CL:0000766!8.18e-22!76;CL:0000557!1.18e-21!71;CL:0002009!2.77e-21!65;CL:0000763!2.23e-20!112;CL:0000049!2.23e-20!112;CL:0002057!3.43e-20!42;CL:0002194!2.47e-19!63;CL:0000576!2.47e-19!63;CL:0000040!2.47e-19!63;CL:0000559!2.47e-19!63;CL:0000839!2.96e-19!70;CL:0000860!3.04e-19!45;CL:0000037!1.16e-15!172;CL:0000566!1.16e-15!172;CL:0000738!1.45e-15!140;CL:0002032!5.25e-15!165;CL:0000837!5.25e-15!165;CL:0000988!2.90e-14!182;CL:0002087!3.45e-13!119;CL:0002031!7.17e-13!124;CL:0000134!5.39e-12!358;CL:0002320!3.38e-11!365;CL:0000219!6.70e-10!390;CL:0000048!6.51e-09!430;CL:0000723!1.05e-08!436;CL:0000034!5.12e-08!444|ontology_enrichment_celltype_v019=CL:0001014;1.12e-21;2!CL:0001016;1.12e-21;2!CL:0002581;1.37e-11;1!CL:0000453;3.12e-09;5!CL:0000840;7.82e-08;5|ontology_enrichment_celltype_v019_2=CL:0001014,1.12e-21,2;CL:0001016,1.12e-21,2;CL:0002581,1.31e-11,1;CL:0000453,3.12e-09,5;CL:0000840,7.83e-08,5;CL:0001029,7.83e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;1.18e-11;1|ontology_enrichment_disease_v019_2=DOID:6193,1.18e-11,1|ontology_enrichment_uberon=UBERON:0002371!1.50e-17!80;UBERON:0001474!2.60e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!8.90e-14!112;UBERON:0004765!2.61e-13!101;UBERON:0001434!2.61e-13!101;UBERON:0002384!1.53e-12!375;UBERON:0002405!1.51e-11!115;UBERON:0002204!1.29e-08!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0.257575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,1.13477044938228,1.24564449799115,0,0,0.434377689410233,0,0.368277635987565,0,0.422510572623884,0.212604299965044,0.209658645508376,0.561643155732475,0.600707571366025,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0,0.473447805734733,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,1.92201649936711,0.211931901159562,0,0.618315175430633,0.257640540045629,0.744467425326359,0.337552664482532,0.389748020644795,0,0.828449087780694,0.323292113637624,0.355009592516614,0.604512589365842,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,1.0404181360211,0,0,0,0,0,0,0.985326475791887,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0.178428988797162,0,0.937131319941706,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.321707842287215,2.96836132889982,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0.540911356951966,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0.12308480546106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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16977 | |||
|TSSclassifier=W | |||
|UniProt=Q9UBK5 | |||
|association_with_transcript=-110bp_to_ENST00000246551,ENST00000437550,NM_001007469,NM_014266,uc002ock.1,uc002ocl.1_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_6_at_HCST_5end | |||
|id=chr19:36393258..36393271,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.18e-22!76;CL:0000557!1.18e-21!71;CL:0002009!2.77e-21!65;CL:0000763!2.23e-20!112;CL:0000049!2.23e-20!112;CL:0002057!3.43e-20!42;CL:0002194!2.47e-19!63;CL:0000576!2.47e-19!63;CL:0000040!2.47e-19!63;CL:0000559!2.47e-19!63;CL:0000839!2.96e-19!70;CL:0000860!3.04e-19!45;CL:0000037!1.16e-15!172;CL:0000566!1.16e-15!172;CL:0000738!1.45e-15!140;CL:0002032!5.25e-15!165;CL:0000837!5.25e-15!165;CL:0000988!2.90e-14!182;CL:0002087!3.45e-13!119;CL:0002031!7.17e-13!124;CL:0000134!5.39e-12!358;CL:0002320!3.38e-11!365;CL:0000219!6.70e-10!390;CL:0000048!6.51e-09!430;CL:0000723!1.05e-08!436;CL:0000034!5.12e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.12e-21;2!CL:0001016;1.12e-21;2!CL:0002581;1.37e-11;1!CL:0000453;3.12e-09;5!CL:0000840;7.82e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.12e-21,2;CL:0001016,1.12e-21,2;CL:0002581,1.31e-11,1;CL:0000453,3.12e-09,5;CL:0000840,7.83e-08,5;CL:0001029,7.83e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.18e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.18e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.50e-17!80;UBERON:0001474!2.60e-16!86;UBERON:0002390!6.23e-16!102;UBERON:0003061!6.23e-16!102;UBERON:0002193!8.90e-14!112;UBERON:0004765!2.61e-13!101;UBERON:0001434!2.61e-13!101;UBERON:0002384!1.53e-12!375;UBERON:0002405!1.51e-11!115;UBERON:0002204!1.29e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@HCST | |||
}} |
Revision as of 20:16, 11 September 2013
Short description: | p6@HCST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HCST_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -110bp_to_ENST00000246551, ENST00000437550, NM_001007469, NM_014266, uc002ock.1, uc002ocl.1_5end |
EntrezGene: | HCST |
HGNC: | 16977 |
UniProt: | Q9UBK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.12e-21 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-21 | 2 |
perirenal preadipocyte | 1.31e-11 | 1 |
Langerhans cell | 3.12e-09 | 5 |
immature conventional dendritic cell | 7.83e-08 | 5 |
common dendritic progenitor | 7.83e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.18e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.