FFCP PHASE1:Hg19::chr19:43709748..43709760,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5672|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9521|TSSclassifier=S|UniProt=C9JWP2,B3KQL2,Q00888,Q6P520|association_with_transcript=29bp_to_ENST00000451895,NM_002780,NM_213633,uc002ovy.2,uc002ovz.2,uc002owa.2,uc002owb.2_5end|coexpression_cluster_id=C34|description=CAGE_peak_2_at_PSG4_5end|id=chr19:43709748..43709760,-|ontology_enrichment_celltype=CL:0002539!5.28e-10!10;CL:0002620!2.12e-08!23;CL:0000057!1.14e-07!75;CL:0002580!2.16e-07!3|ontology_enrichment_celltype_v019=CL:0002620;2.20e-14;23!CL:0002580;9.84e-13;3!CL:0002561;1.07e-09;2!CL:0002617;4.70e-09;2!CL:0000197;3.85e-07;6!CL:0000098;3.85e-07;6!CL:0002167;3.85e-07;6|ontology_enrichment_celltype_v019_2=CL:0002620,2.36e-14,23;CL:0002580,8.69e-13,3;CL:0002561,8.08e-10,2;CL:0000057,1.40e-09,76;CL:0002617,6.31e-09,2;CL:0000197,3.35e-07,6;CL:0000098,3.35e-07,6;CL:0002167,3.35e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;5.61e-09;5!DOID:450;5.61e-09;5!DOID:66;5.61e-09;5!DOID:423;5.61e-09;5!DOID:0080000;5.61e-09;5!DOID:11722;5.61e-09;5|ontology_enrichment_disease_v019_2=DOID:17,5.68e-09,5;DOID:450,5.68e-09,5;DOID:66,5.68e-09,5;DOID:423,5.68e-09,5;DOID:0080000,5.68e-09,5;DOID:11722,5.68e-09,5|ontology_enrichment_uberon=UBERON:0004237!5.28e-10!10;UBERON:0004695!5.28e-10!10;UBERON:0002111!5.28e-10!10;UBERON:0004178!5.28e-10!10;UBERON:0002097!6.65e-08!40;UBERON:0000947!5.81e-07!21;UBERON:0010191!5.81e-07!21|ontology_enrichment_uberon_v019=UBERON:0002097;2.91e-10;41!UBERON:0000310;6.20e-10;10!UBERON:0005933;1.07e-09;2!UBERON:0005942;1.07e-09;2!UBERON:0005932;1.07e-09;2!UBERON:0001443;5.20e-09;11!UBERON:0002199;1.60e-07;46!UBERON:0002416;1.60e-07;46|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.02e-13,41;UBERON:0002199,1.59e-11,46;UBERON:0002416,1.59e-11,46;UBERON:0000310,6.72e-10,10;UBERON:0005933,8.08e-10,2;UBERON:0005942,8.08e-10,2;UBERON:0005932,8.08e-10,2;UBERON:0001443,5.60e-09,11|phase1_expression=1.2717486548939,1.07050261945492,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0.527533956456907,0,0,0.672325146451775,0,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.77883131343355,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,6.75286822147416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08636562782948,19.5059212454861,12.9846186840433,0,0,5.90717162844432,3.02054715999716,5.04867548488229,3.58994604704967,0,9.23024940543197,2.51880245569101,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78620756819187,3.60939740834793,0.236613600079688,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.86156681609409,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.63915370872621,0,2.6942525448324,0,0,0,0,0,1.91143951829782,0,0,0,0,0,0,3.32870879020994,0,1.73675465473144,1.99500565274481,1.12264037773229,0,2.55853624533352,0.321707842287215,0,0,0,0.164254312027618,0,0,0,1.20303882181971,0,0.68888668898764,2.00300284807389,0,0,1.38627606787947,0,0,0.422206515571503,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,3.60816110269676,0.650756789328606,12.5710034210221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,1.39453664789186,10.3888074454111,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59349831675173,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,13.650851112633,0,0,0,0,0,0,0,0,0,0,0,0,2.02965735142199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28767299025073,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,5.67330436243047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52471699083167,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.523014231561666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.447764408660622,0,0,0,0,0,0.457680136793847,0,0,0,0.159296767163702,0,0,0,1.06336685823198,0,0,0.380805212168795,0.813741466409323,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.734210113519403,3.40268798054826,0,0,2.29695889729645,2.89371057406372,0,0,0,16.1045776774013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,49.9394344015657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@PSG4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9521 | |||
|TSSclassifier=S | |||
|UniProt=C9JWP2,B3KQL2,Q00888,Q6P520 | |||
|association_with_transcript=29bp_to_ENST00000451895,NM_002780,NM_213633,uc002ovy.2,uc002ovz.2,uc002owa.2,uc002owb.2_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_2_at_PSG4_5end | |||
|id=chr19:43709748..43709760,- | |||
|ontology_enrichment_celltype=CL:0002539!5.28e-10!10;CL:0002620!2.12e-08!23;CL:0000057!1.14e-07!75;CL:0002580!2.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.20e-14;23!CL:0002580;9.84e-13;3!CL:0002561;1.07e-09;2!CL:0002617;4.70e-09;2!CL:0000197;3.85e-07;6!CL:0000098;3.85e-07;6!CL:0002167;3.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.36e-14,23;CL:0002580,8.69e-13,3;CL:0002561,8.08e-10,2;CL:0000057,1.40e-09,76;CL:0002617,6.31e-09,2;CL:0000197,3.35e-07,6;CL:0000098,3.35e-07,6;CL:0002167,3.35e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.61e-09;5!DOID:450;5.61e-09;5!DOID:66;5.61e-09;5!DOID:423;5.61e-09;5!DOID:0080000;5.61e-09;5!DOID:11722;5.61e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.68e-09,5;DOID:450,5.68e-09,5;DOID:66,5.68e-09,5;DOID:423,5.68e-09,5;DOID:0080000,5.68e-09,5;DOID:11722,5.68e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004237!5.28e-10!10;UBERON:0004695!5.28e-10!10;UBERON:0002111!5.28e-10!10;UBERON:0004178!5.28e-10!10;UBERON:0002097!6.65e-08!40;UBERON:0000947!5.81e-07!21;UBERON:0010191!5.81e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.91e-10;41!UBERON:0000310;6.20e-10;10!UBERON:0005933;1.07e-09;2!UBERON:0005942;1.07e-09;2!UBERON:0005932;1.07e-09;2!UBERON:0001443;5.20e-09;11!UBERON:0002199;1.60e-07;46!UBERON:0002416;1.60e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.02e-13,41;UBERON:0002199,1.59e-11,46;UBERON:0002416,1.59e-11,46;UBERON:0000310,6.72e-10,10;UBERON:0005933,8.08e-10,2;UBERON:0005942,8.08e-10,2;UBERON:0005932,8.08e-10,2;UBERON:0001443,5.60e-09,11 | |||
|phase1_expression=1.2717486548939,1.07050261945492,0,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0.527533956456907,0,0,0.672325146451775,0,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,1.77883131343355,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,6.75286822147416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08636562782948,19.5059212454861,12.9846186840433,0,0,5.90717162844432,3.02054715999716,5.04867548488229,3.58994604704967,0,9.23024940543197,2.51880245569101,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78620756819187,3.60939740834793,0.236613600079688,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,1.86156681609409,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95144636908534,4.63915370872621,0,2.6942525448324,0,0,0,0,0,1.91143951829782,0,0,0,0,0,0,3.32870879020994,0,1.73675465473144,1.99500565274481,1.12264037773229,0,2.55853624533352,0.321707842287215,0,0,0,0.164254312027618,0,0,0,1.20303882181971,0,0.68888668898764,2.00300284807389,0,0,1.38627606787947,0,0,0.422206515571503,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,3.60816110269676,0.650756789328606,12.5710034210221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,1.39453664789186,10.3888074454111,0.6970372701606,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59349831675173,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,13.650851112633,0,0,0,0,0,0,0,0,0,0,0,0,2.02965735142199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28767299025073,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,5.67330436243047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52471699083167,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.523014231561666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.447764408660622,0,0,0,0,0,0.457680136793847,0,0,0,0.159296767163702,0,0,0,1.06336685823198,0,0,0.380805212168795,0.813741466409323,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.734210113519403,3.40268798054826,0,0,2.29695889729645,2.89371057406372,0,0,0,16.1045776774013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,49.9394344015657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PSG4 | |||
}} |
Revision as of 20:59, 11 September 2013
Short description: | p2@PSG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PSG4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 29bp_to_ENST00000451895, NM_002780, NM_213633, uc002ovy.2, uc002ovz.2, uc002owa.2, uc002owb.2_5end |
EntrezGene: | PSG4 |
HGNC: | 9521 |
UniProt: | C9JWP2B3KQL2Q00888Q6P520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.36e-14 | 23 |
preadipocyte of the breast | 8.69e-13 | 3 |
outer root sheath cell | 8.08e-10 | 2 |
fibroblast | 1.40e-09 | 76 |
adipocyte of breast | 6.31e-09 | 2 |
receptor cell | 3.35e-07 | 6 |
sensory epithelial cell | 3.35e-07 | 6 |
olfactory epithelial cell | 3.35e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.02e-13 | 41 |
integument | 1.59e-11 | 46 |
integumental system | 1.59e-11 | 46 |
breast | 6.72e-10 | 10 |
hair root sheath | 8.08e-10 | 2 |
hair outer root sheath | 8.08e-10 | 2 |
bulb of hair follicle | 8.08e-10 | 2 |
chest | 5.60e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.68e-09 | 5 |
myotonic disease | 5.68e-09 | 5 |
muscle tissue disease | 5.68e-09 | 5 |
myopathy | 5.68e-09 | 5 |
muscular disease | 5.68e-09 | 5 |
myotonic dystrophy | 5.68e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.