FFCP PHASE1:Hg19::chr19:46801484..46801498,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64344|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15825|TSSclassifier=S|UniProt=|association_with_transcript=-56bp_to_ENST00000524533_5end|coexpression_cluster_id=C115|description=CAGE_peak_9_at_HIF3A_5end|id=chr19:46801484..46801498,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;1.53e-09;3!CL:0002577;1.53e-09;3|ontology_enrichment_celltype_v019_2=CL:0002577,1.54e-09,3;CL:0002615,1.81e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.78e-24!115;UBERON:0002616!3.98e-15!59;UBERON:0002346!3.76e-12!90;UBERON:0001049!9.61e-12!57;UBERON:0005068!9.61e-12!57;UBERON:0006241!9.61e-12!57;UBERON:0007135!9.61e-12!57;UBERON:0000955!1.48e-11!69;UBERON:0006238!1.48e-11!69;UBERON:0003075!3.18e-11!86;UBERON:0007284!3.18e-11!86;UBERON:0000153!1.36e-10!129;UBERON:0007811!1.36e-10!129;UBERON:0003056!1.39e-10!61;UBERON:0000064!2.40e-10!219;UBERON:0002298!3.66e-10!8;UBERON:0000033!4.36e-10!123;UBERON:0000481!1.05e-09!347;UBERON:0003080!1.13e-09!42;UBERON:0001894!1.55e-09!7;UBERON:0006222!1.55e-09!7;UBERON:0005743!1.58e-09!86;UBERON:0001017!1.97e-09!82;UBERON:0000924!2.34e-09!173;UBERON:0006601!2.34e-09!173;UBERON:0002780!1.06e-08!41;UBERON:0001890!1.06e-08!41;UBERON:0006240!1.06e-08!41;UBERON:0004121!1.27e-08!169;UBERON:0003296!1.55e-08!4;UBERON:0010133!1.55e-08!4;UBERON:0000475!4.78e-08!365;UBERON:0000073!6.15e-08!94;UBERON:0001016!6.15e-08!94;UBERON:0000062!7.97e-08!511;UBERON:0000468!1.33e-07!659;UBERON:0000923!1.54e-07!604;UBERON:0005291!1.54e-07!604;UBERON:0006598!1.54e-07!604;UBERON:0002532!1.54e-07!604;UBERON:0002050!1.74e-07!605;UBERON:0005423!1.74e-07!605;UBERON:0002200!1.85e-07!11;UBERON:0006876!1.85e-07!11;UBERON:0005631!3.06e-07!14;UBERON:0000158!3.06e-07!14;UBERON:0000922!4.14e-07!612|ontology_enrichment_uberon_v019=UBERON:0000007;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0001954;1.21e-13;2!UBERON:0003022;1.21e-13;2!UBERON:0002421;1.21e-13;2!UBERON:0002600;1.21e-13;2!UBERON:0001987;1.80e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0001954,1.37e-13,2;UBERON:0003022,1.37e-13,2;UBERON:0002421,1.37e-13,2;UBERON:0002600,1.37e-13,2;UBERON:0005631,4.82e-08,14;UBERON:0000158,4.82e-08,14;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4|phase1_expression=0,0.214100523890983,0.140954404095971,0,1.34088328328186,0,0,0,0,0.245733936501509,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.605429710579726,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,1.81434175997808,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.275673144969061,0.644521469209642,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,1.84296421259539,0,0.281338832821026,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.470284307407084,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15825 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_ENST00000524533_5end | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_9_at_HIF3A_5end | |||
|id=chr19:46801484..46801498,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.53e-09;3!CL:0002577;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.54e-09,3;CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.78e-24!115;UBERON:0002616!3.98e-15!59;UBERON:0002346!3.76e-12!90;UBERON:0001049!9.61e-12!57;UBERON:0005068!9.61e-12!57;UBERON:0006241!9.61e-12!57;UBERON:0007135!9.61e-12!57;UBERON:0000955!1.48e-11!69;UBERON:0006238!1.48e-11!69;UBERON:0003075!3.18e-11!86;UBERON:0007284!3.18e-11!86;UBERON:0000153!1.36e-10!129;UBERON:0007811!1.36e-10!129;UBERON:0003056!1.39e-10!61;UBERON:0000064!2.40e-10!219;UBERON:0002298!3.66e-10!8;UBERON:0000033!4.36e-10!123;UBERON:0000481!1.05e-09!347;UBERON:0003080!1.13e-09!42;UBERON:0001894!1.55e-09!7;UBERON:0006222!1.55e-09!7;UBERON:0005743!1.58e-09!86;UBERON:0001017!1.97e-09!82;UBERON:0000924!2.34e-09!173;UBERON:0006601!2.34e-09!173;UBERON:0002780!1.06e-08!41;UBERON:0001890!1.06e-08!41;UBERON:0006240!1.06e-08!41;UBERON:0004121!1.27e-08!169;UBERON:0003296!1.55e-08!4;UBERON:0010133!1.55e-08!4;UBERON:0000475!4.78e-08!365;UBERON:0000073!6.15e-08!94;UBERON:0001016!6.15e-08!94;UBERON:0000062!7.97e-08!511;UBERON:0000468!1.33e-07!659;UBERON:0000923!1.54e-07!604;UBERON:0005291!1.54e-07!604;UBERON:0006598!1.54e-07!604;UBERON:0002532!1.54e-07!604;UBERON:0002050!1.74e-07!605;UBERON:0005423!1.74e-07!605;UBERON:0002200!1.85e-07!11;UBERON:0006876!1.85e-07!11;UBERON:0005631!3.06e-07!14;UBERON:0000158!3.06e-07!14;UBERON:0000922!4.14e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0001894;2.47e-15;7!UBERON:0001954;1.21e-13;2!UBERON:0003022;1.21e-13;2!UBERON:0002421;1.21e-13;2!UBERON:0002600;1.21e-13;2!UBERON:0001987;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0001954,1.37e-13,2;UBERON:0003022,1.37e-13,2;UBERON:0002421,1.37e-13,2;UBERON:0002600,1.37e-13,2;UBERON:0005631,4.82e-08,14;UBERON:0000158,4.82e-08,14;UBERON:0001987,1.80e-07,4;UBERON:0004340,1.80e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,1.34088328328186,0,0,0,0,0.245733936501509,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.605429710579726,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,1.81434175997808,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.275673144969061,0.644521469209642,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0,0,0.75894634753143,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,1.84296421259539,0,0.281338832821026,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0.470284307407084,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.106787412567695,0.78602152549833,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0.351742488719241,0,0.535701835878287,0.336283722218824,4.24875922965642,7.05752793189023,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.428859265059938,0,0,0,0,0.62164849248911,0.51215543128185,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p9@HIF3A | |||
}} |
Revision as of 21:23, 11 September 2013
Short description: | p9@HIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_HIF3A_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -56bp_to_ENST00000524533_5end |
EntrezGene: | HIF3A |
HGNC: | 15825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.54e-09 | 3 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
Ammon's horn | 1.37e-13 | 2 |
lobe parts of cerebral cortex | 1.37e-13 | 2 |
hippocampal formation | 1.37e-13 | 2 |
limbic lobe | 1.37e-13 | 2 |
extraembryonic membrane | 4.82e-08 | 14 |
membranous layer | 4.82e-08 | 14 |
placenta | 1.80e-07 | 4 |
allantois | 1.80e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.