FFCP PHASE1:Hg19::chr2:110970068..110970079,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=205251|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=27339|TSSclassifier=S|UniProt=|association_with_transcript=44bp_to_BC031315_5end|description=CAGE_peak_3_at_LINC00116_5end|id=chr2:110970068..110970079,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.67e-11!365;UBERON:0000481!4.27e-09!347;UBERON:0003103!1.01e-07!69;UBERON:0004111!1.16e-07!241;UBERON:0000483!2.26e-07!309;UBERON:0000119!2.41e-07!312;UBERON:0000025!2.50e-07!194;UBERON:0000477!2.55e-07!286;UBERON:0001049!6.96e-07!57;UBERON:0005068!6.96e-07!57;UBERON:0006241!6.96e-07!57;UBERON:0007135!6.96e-07!57|ontology_enrichment_uberon_v019=UBERON:0002619;3.84e-07;22!UBERON:0010313;4.44e-07;10!UBERON:0001950;9.45e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.52e-07,22;UBERON:0000025,4.41e-07,192;UBERON:0003103,7.70e-07,68;UBERON:0010313,8.41e-07,10;UBERON:0002342,8.41e-07,10;UBERON:0005062,8.41e-07,10|phase1_expression=0.54503513781167,0.856402095563933,1.26858963686374,3.00219895059391,1.78784437770915,0.872338524100369,0,0.631719873426831,0.522371256399677,0.737201809504527,3.48900583986214,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,0,0.738726348460727,1.22400414746552,0.626909442956176,0,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0.154816123316076,3.67768489791571,0.30120591877825,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0.419317291016752,0,0,0.16072558669708,0.285012743741249,0,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,1.94826728407911,0.222820913770347,0,0,0,0.128091319725675,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0.144824403882799,0,0,0.511450247374121,0,1.00267582127178,0.579386075843295,2.3858578411533,2.43317435151318,0.0945348171640679,0.221729397462564,0.175669571386252,0.589405839739707,2.18577172975525,1.48313777113772,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0.838998872419812,1.10047216776027,0,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0,1.62028389576352,0.17859945656816,0.673588117878509,0.450445921933289,0,0,0.549605231791222,0,0,1.74437620857014,1.98788780678127,1.01304409331664,0.529636723252875,0.286836620748814,1.06400514659507,0.560677600142307,0,1.2333377420858,0,0.134710672069688,0.817309515567294,0.151357427644931,0,0.937285727335186,0.936480230490962,0.570471821544449,0,0.469737994575059,0.647491777472526,0.842704840213491,0,0.122834317311768,0.103325781175765,0,0,0,4.31170885089743,0.168336113954066,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0.794025282120147,0.179389635688862,0.213557388818567,1.27159140695737,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0.584622030967192,0.252433774244115,0.0920498986422993,0,0,0.503760491138201,0.67824236924195,1.15956511897978,1.36373060295417,0.286804595389004,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0.946454400318751,1.18009283054671,0.482022059766964,0.220587945464788,1.08939722046203,0.949082476444386,0.808987848960987,0.98110732562673,1.53898862778556,0,1.40241773803446,1.6462960453256,0,1.26755034821831,0,0,0.441463099414651,0,0.343135620597051,1.09750285408626,1.1240175325762,0.301586917234893,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0.148631162288728,3.74935335947108,0.839910640994298,0.567100388969546,0.53735113621709,0.581267877027924,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0.43596006883328,0.1466765716419,0,3.57656445851882,0.845302752556,0,0,0.771622122786426,0,0.266422179016099,0,0,0.823240336780769,0.977208552881205,0,0.791951872933429,1.20575750823834,0.871533458600294,0.699810938274399,0,0.502257091432126,0,0.958499421966331,0,0,1.15825045334063,0,0.895304816199478,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,1.03473071292505,1.32845119707087,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,1.21251028578504,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0.482561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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=205251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27339 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=44bp_to_BC031315_5end | |||
|description=CAGE_peak_3_at_LINC00116_5end | |||
|id=chr2:110970068..110970079,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.67e-11!365;UBERON:0000481!4.27e-09!347;UBERON:0003103!1.01e-07!69;UBERON:0004111!1.16e-07!241;UBERON:0000483!2.26e-07!309;UBERON:0000119!2.41e-07!312;UBERON:0000025!2.50e-07!194;UBERON:0000477!2.55e-07!286;UBERON:0001049!6.96e-07!57;UBERON:0005068!6.96e-07!57;UBERON:0006241!6.96e-07!57;UBERON:0007135!6.96e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.84e-07;22!UBERON:0010313;4.44e-07;10!UBERON:0001950;9.45e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.52e-07,22;UBERON:0000025,4.41e-07,192;UBERON:0003103,7.70e-07,68;UBERON:0010313,8.41e-07,10;UBERON:0002342,8.41e-07,10;UBERON:0005062,8.41e-07,10 | |||
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| |||
|short_description=p3@LINC00116 | |||
}} |
Revision as of 12:57, 12 September 2013
Short description: | p3@LINC00116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LINC00116_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_BC031315_5end |
EntrezGene: | LINC00116 |
HGNC: | 27339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 3.52e-07 | 22 |
tube | 4.41e-07 | 192 |
compound organ | 7.70e-07 | 68 |
neural crest-derived structure | 8.41e-07 | 10 |
neural crest | 8.41e-07 | 10 |
neural fold | 8.41e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.