FFCP PHASE1:Hg19::chr2:202021629..202021643,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C656|description=CAGE_peak_at_chr2:202021629..202021643,+|id=chr2:202021629..202021643,+|ontology_enrichment_celltype=CL:0002057!2.28e-43!42;CL:0002009!2.61e-41!65;CL:0000860!4.82e-40!45;CL:0000557!3.33e-37!71;CL:0002194!9.12e-37!63;CL:0000576!9.12e-37!63;CL:0000040!9.12e-37!63;CL:0000559!9.12e-37!63;CL:0000766!4.69e-34!76;CL:0000839!2.09e-32!70;CL:0000738!8.74e-29!140;CL:0000763!6.01e-26!112;CL:0000049!6.01e-26!112;CL:0002087!9.66e-26!119;CL:0000037!1.32e-24!172;CL:0000566!1.32e-24!172;CL:0002031!9.61e-23!124;CL:0000988!1.02e-22!182;CL:0002032!5.06e-20!165;CL:0000837!5.06e-20!165;CL:0002393!1.08e-13!9;CL:0002397!1.08e-13!9;CL:0000134!1.42e-11!358;CL:0002320!3.82e-11!365;CL:0000840!8.87e-10!5;CL:0001029!8.87e-10!5;CL:0000219!1.24e-09!390;CL:0001014!3.29e-08!2;CL:0001016!3.29e-08!2;CL:0000034!6.50e-08!444;CL:0000451!7.24e-08!10;CL:0000048!7.75e-08!430;CL:0000723!1.39e-07!436|ontology_enrichment_celltype_v019=CL:0000037;1.92e-15;1!CL:0001024;1.92e-15;1!CL:0000860;6.97e-14;33!CL:0002057;6.97e-14;33!CL:0000576;1.37e-10;48!CL:0002393;1.69e-10;6!CL:0002397;1.69e-10;6!CL:0000473;4.98e-10;39!CL:0000234;4.98e-10;39!CL:0000766;1.24e-08;69!CL:0001014;1.24e-08;2!CL:0001016;1.24e-08;2!CL:0002087;7.82e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-21,42;CL:0002057,5.24e-21,42;CL:0000473,2.64e-18,48;CL:0000234,2.64e-18,48;CL:0002009,8.74e-18,61;CL:0000557,3.84e-16,67;CL:0001024,2.38e-15,1;CL:0002194,1.64e-14,59;CL:0000576,1.64e-14,59;CL:0000040,1.64e-14,59;CL:0000559,1.64e-14,59;CL:0000839,6.34e-13,66;CL:0000766,8.36e-12,72;CL:0000763,9.82e-10,108;CL:0000049,9.82e-10,108;CL:0000738,2.33e-09,136;CL:0002087,4.87e-09,115;CL:0000037,5.14e-09,168;CL:0002031,1.13e-08,120;CL:0001014,1.29e-08,2;CL:0001016,1.29e-08,2;CL:0000988,1.70e-08,177;CL:0002393,2.60e-07,9;CL:0002397,2.60e-07,9|ontology_enrichment_development_v019=CL:0002057;1.66e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.64e-36!102;UBERON:0003061!4.64e-36!102;UBERON:0002371!9.55e-35!80;UBERON:0001474!5.21e-34!86;UBERON:0002193!4.69e-32!112;UBERON:0002405!1.23e-28!115;UBERON:0004765!8.77e-28!101;UBERON:0001434!8.77e-28!101;UBERON:0003081!2.01e-15!216;UBERON:0002204!1.09e-13!167;UBERON:0002384!1.47e-10!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-19,98;UBERON:0003061,2.08e-19,98;UBERON:0002193,1.61e-17,108;UBERON:0002371,1.74e-17,76;UBERON:0001474,3.76e-16,82;UBERON:0004765,1.21e-14,90;UBERON:0002405,3.83e-14,93;UBERON:0001434,4.31e-13,100;UBERON:0003081,9.32e-09,203;UBERON:0002204,1.98e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,1.60435557976113,4.12320654360118,0,0,0,0,0,0,0,0,0.929119112685311,0,0.256160706529101,1.6553756092201,1.03423704220986,0,5.41705946377367,0.376484679085209,0,1.34834090667051,0.612167784741805,1.60464513538047,1.91801137739712,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0.868755378820466,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0.419317291016752,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.2249738915515,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:202021629..202021643,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C656 | |||
|description=CAGE_peak_at_chr2:202021629..202021643,+ | |||
|id=chr2:202021629..202021643,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.28e-43!42;CL:0002009!2.61e-41!65;CL:0000860!4.82e-40!45;CL:0000557!3.33e-37!71;CL:0002194!9.12e-37!63;CL:0000576!9.12e-37!63;CL:0000040!9.12e-37!63;CL:0000559!9.12e-37!63;CL:0000766!4.69e-34!76;CL:0000839!2.09e-32!70;CL:0000738!8.74e-29!140;CL:0000763!6.01e-26!112;CL:0000049!6.01e-26!112;CL:0002087!9.66e-26!119;CL:0000037!1.32e-24!172;CL:0000566!1.32e-24!172;CL:0002031!9.61e-23!124;CL:0000988!1.02e-22!182;CL:0002032!5.06e-20!165;CL:0000837!5.06e-20!165;CL:0002393!1.08e-13!9;CL:0002397!1.08e-13!9;CL:0000134!1.42e-11!358;CL:0002320!3.82e-11!365;CL:0000840!8.87e-10!5;CL:0001029!8.87e-10!5;CL:0000219!1.24e-09!390;CL:0001014!3.29e-08!2;CL:0001016!3.29e-08!2;CL:0000034!6.50e-08!444;CL:0000451!7.24e-08!10;CL:0000048!7.75e-08!430;CL:0000723!1.39e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.92e-15;1!CL:0001024;1.92e-15;1!CL:0000860;6.97e-14;33!CL:0002057;6.97e-14;33!CL:0000576;1.37e-10;48!CL:0002393;1.69e-10;6!CL:0002397;1.69e-10;6!CL:0000473;4.98e-10;39!CL:0000234;4.98e-10;39!CL:0000766;1.24e-08;69!CL:0001014;1.24e-08;2!CL:0001016;1.24e-08;2!CL:0002087;7.82e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-21,42;CL:0002057,5.24e-21,42;CL:0000473,2.64e-18,48;CL:0000234,2.64e-18,48;CL:0002009,8.74e-18,61;CL:0000557,3.84e-16,67;CL:0001024,2.38e-15,1;CL:0002194,1.64e-14,59;CL:0000576,1.64e-14,59;CL:0000040,1.64e-14,59;CL:0000559,1.64e-14,59;CL:0000839,6.34e-13,66;CL:0000766,8.36e-12,72;CL:0000763,9.82e-10,108;CL:0000049,9.82e-10,108;CL:0000738,2.33e-09,136;CL:0002087,4.87e-09,115;CL:0000037,5.14e-09,168;CL:0002031,1.13e-08,120;CL:0001014,1.29e-08,2;CL:0001016,1.29e-08,2;CL:0000988,1.70e-08,177;CL:0002393,2.60e-07,9;CL:0002397,2.60e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.64e-36!102;UBERON:0003061!4.64e-36!102;UBERON:0002371!9.55e-35!80;UBERON:0001474!5.21e-34!86;UBERON:0002193!4.69e-32!112;UBERON:0002405!1.23e-28!115;UBERON:0004765!8.77e-28!101;UBERON:0001434!8.77e-28!101;UBERON:0003081!2.01e-15!216;UBERON:0002204!1.09e-13!167;UBERON:0002384!1.47e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.08e-19,98;UBERON:0003061,2.08e-19,98;UBERON:0002193,1.61e-17,108;UBERON:0002371,1.74e-17,76;UBERON:0001474,3.76e-16,82;UBERON:0004765,1.21e-14,90;UBERON:0002405,3.83e-14,93;UBERON:0001434,4.31e-13,100;UBERON:0003081,9.32e-09,203;UBERON:0002204,1.98e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,1.60435557976113,4.12320654360118,0,0,0,0,0,0,0,0,0.929119112685311,0,0.256160706529101,1.6553756092201,1.03423704220986,0,5.41705946377367,0.376484679085209,0,1.34834090667051,0.612167784741805,1.60464513538047,1.91801137739712,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0.868755378820466,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0.419317291016752,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.2249738915515,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:202021629..202021643,+ | |||
}} |
Revision as of 16:01, 12 September 2013
Short description: | p@chr2:202021629..202021643, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:202021629..202021643, + |
Coexpression cluster: | C656_CD14_immature_Dendritic_Basophils_CD34_CD133_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-21 | 42 |
defensive cell | 2.64e-18 | 48 |
phagocyte | 2.64e-18 | 48 |
macrophage dendritic cell progenitor | 8.74e-18 | 61 |
granulocyte monocyte progenitor cell | 3.84e-16 | 67 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.38e-15 | 1 |
monopoietic cell | 1.64e-14 | 59 |
monocyte | 1.64e-14 | 59 |
monoblast | 1.64e-14 | 59 |
promonocyte | 1.64e-14 | 59 |
myeloid lineage restricted progenitor cell | 6.34e-13 | 66 |
myeloid leukocyte | 8.36e-12 | 72 |
myeloid cell | 9.82e-10 | 108 |
common myeloid progenitor | 9.82e-10 | 108 |
leukocyte | 2.33e-09 | 136 |
nongranular leukocyte | 4.87e-09 | 115 |
hematopoietic stem cell | 5.14e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 1.13e-08 | 120 |
CD1a-positive Langerhans cell | 1.29e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.29e-08 | 2 |
hematopoietic cell | 1.70e-08 | 177 |
intermediate monocyte | 2.60e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.08e-19 | 98 |
blood island | 2.08e-19 | 98 |
hemolymphoid system | 1.61e-17 | 108 |
bone marrow | 1.74e-17 | 76 |
bone element | 3.76e-16 | 82 |
skeletal element | 1.21e-14 | 90 |
immune system | 3.83e-14 | 93 |
skeletal system | 4.31e-13 | 100 |
lateral plate mesoderm | 9.32e-09 | 203 |
musculoskeletal system | 1.98e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.