FFCP PHASE1:Hg19::chr2:219925637..219925649,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3549|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5956|TSSclassifier=S|UniProt=Q14623|association_with_transcript=-399bp_to_NM_002181_5end|coexpression_cluster_id=C4187|description=CAGE_peak_1_at_IHH_5end|id=chr2:219925637..219925649,-|ontology_enrichment_celltype=CL:0000181!1.09e-07!12;CL:0000417!1.09e-07!12;CL:0000668!1.09e-07!12;CL:0000414!1.09e-07!12;CL:0000412!1.09e-07!12;CL:0000182!1.09e-07!12|ontology_enrichment_celltype_v019=CL:0002322;1.21e-07;5!CL:0000062;8.49e-07;9|ontology_enrichment_celltype_v019_2=CL:0002322,1.24e-07,5|ontology_enrichment_development_v019=UBERON:0003104;1.51e-10;31!UBERON:0004161;7.86e-09;11!UBERON:0007297;1.28e-08;2!UBERON:0009497;2.02e-07;13|ontology_enrichment_disease=DOID:3119!4.42e-07!14|ontology_enrichment_disease_v019=DOID:3119;1.57e-09;14!DOID:3493;7.42e-09;2|ontology_enrichment_disease_v019_2=DOID:3119,1.52e-09,14;DOID:3493,8.03e-09,2|ontology_enrichment_uberon=UBERON:0004921!5.60e-11!129;UBERON:0004185!5.60e-11!129;UBERON:0005409!8.58e-11!35;UBERON:0000160!6.57e-10!27;UBERON:0009854!1.95e-09!23;UBERON:0001007!3.75e-09!155;UBERON:0001555!3.75e-09!155;UBERON:0007026!3.75e-09!155;UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0009497!2.05e-08!25;UBERON:0000015!2.05e-08!25;UBERON:0002423!2.05e-08!25;UBERON:0006235!2.05e-08!25;UBERON:0004161!2.05e-08!25;UBERON:0008835!2.87e-08!22;UBERON:0003894!2.87e-08!22;UBERON:0000059!5.62e-08!11;UBERON:0009856!5.72e-08!26;UBERON:0003929!4.84e-07!54;UBERON:0000077!5.20e-07!130;UBERON:0002107!5.47e-07!19;UBERON:0006925!5.47e-07!19;UBERON:0008836!5.47e-07!19;UBERON:0007499!6.21e-07!25|ontology_enrichment_uberon_v019=UBERON:0005409;7.63e-32;22!UBERON:0000160;1.13e-25;17!UBERON:0004921;2.48e-18;33!UBERON:0000059;1.36e-17;11!UBERON:0004907;3.76e-13;5!UBERON:0001155;1.40e-11;9!UBERON:0001052;1.42e-09;4!UBERON:0002108;3.33e-08;4!UBERON:0000945;1.01e-07;5!UBERON:0010039;1.01e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.29e-28,25;UBERON:0000160,1.01e-25,17;UBERON:0000059,1.23e-17,11;UBERON:0004907,3.32e-13,5;UBERON:0001155,1.38e-11,9;UBERON:0004921,7.00e-11,118;UBERON:0001052,1.28e-09,4;UBERON:0001007,6.57e-09,145;UBERON:0001555,6.57e-09,145;UBERON:0007026,6.57e-09,145;UBERON:0002108,3.33e-08,4;UBERON:0004119,1.35e-07,160;UBERON:0000925,1.35e-07,160;UBERON:0006595,1.35e-07,160;UBERON:0001046,6.01e-07,19|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.86388272718252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.397589304964456,6.50686080069303,3.21349270547648,9.84051318414951,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,8.97815601364729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0,0,0,11.7233666103874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,1.28197250745681,1.40266149865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03150133361924,0,0,0,0,0,0,0,0,0,0,14.3341509592271,0,4.22961015263549,45.6622918596056,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,25.9706880599279,9.06957892275394,0.102268682502155,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0.113942055847001,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,12.2977172147529,0,108.483550487557,43.0788339131262,227.303213915309,0,0,0,0,0,0,0,0.586993856796269,0,0.789168805698781,56.865636542872,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,9.43524008506963,0,0,0,0,0.775912131907355,0,0.90392296312213,0,0,0,0,0,25.6143593687223,0,6.91634002339709,0,170.908617870517,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,76.8873266881195,0.472699093843342,0.824158583811665,0.471824806979294,2.85439696392771,0,0,0,0,0,0,0,0,0,0,4.2555081941567,2.937456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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5956 | |||
|TSSclassifier=S | |||
|UniProt=Q14623 | |||
|association_with_transcript=-399bp_to_NM_002181_5end | |||
|coexpression_cluster_id=C4187 | |||
|description=CAGE_peak_1_at_IHH_5end | |||
|id=chr2:219925637..219925649,- | |||
|ontology_enrichment_celltype=CL:0000181!1.09e-07!12;CL:0000417!1.09e-07!12;CL:0000668!1.09e-07!12;CL:0000414!1.09e-07!12;CL:0000412!1.09e-07!12;CL:0000182!1.09e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.21e-07;5!CL:0000062;8.49e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.51e-10;31!UBERON:0004161;7.86e-09;11!UBERON:0007297;1.28e-08;2!UBERON:0009497;2.02e-07;13 | |||
|ontology_enrichment_disease=DOID:3119!4.42e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.57e-09;14!DOID:3493;7.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.52e-09,14;DOID:3493,8.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!5.60e-11!129;UBERON:0004185!5.60e-11!129;UBERON:0005409!8.58e-11!35;UBERON:0000160!6.57e-10!27;UBERON:0009854!1.95e-09!23;UBERON:0001007!3.75e-09!155;UBERON:0001555!3.75e-09!155;UBERON:0007026!3.75e-09!155;UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0009497!2.05e-08!25;UBERON:0000015!2.05e-08!25;UBERON:0002423!2.05e-08!25;UBERON:0006235!2.05e-08!25;UBERON:0004161!2.05e-08!25;UBERON:0008835!2.87e-08!22;UBERON:0003894!2.87e-08!22;UBERON:0000059!5.62e-08!11;UBERON:0009856!5.72e-08!26;UBERON:0003929!4.84e-07!54;UBERON:0000077!5.20e-07!130;UBERON:0002107!5.47e-07!19;UBERON:0006925!5.47e-07!19;UBERON:0008836!5.47e-07!19;UBERON:0007499!6.21e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.63e-32;22!UBERON:0000160;1.13e-25;17!UBERON:0004921;2.48e-18;33!UBERON:0000059;1.36e-17;11!UBERON:0004907;3.76e-13;5!UBERON:0001155;1.40e-11;9!UBERON:0001052;1.42e-09;4!UBERON:0002108;3.33e-08;4!UBERON:0000945;1.01e-07;5!UBERON:0010039;1.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.29e-28,25;UBERON:0000160,1.01e-25,17;UBERON:0000059,1.23e-17,11;UBERON:0004907,3.32e-13,5;UBERON:0001155,1.38e-11,9;UBERON:0004921,7.00e-11,118;UBERON:0001052,1.28e-09,4;UBERON:0001007,6.57e-09,145;UBERON:0001555,6.57e-09,145;UBERON:0007026,6.57e-09,145;UBERON:0002108,3.33e-08,4;UBERON:0004119,1.35e-07,160;UBERON:0000925,1.35e-07,160;UBERON:0006595,1.35e-07,160;UBERON:0001046,6.01e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.86388272718252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.397589304964456,6.50686080069303,3.21349270547648,9.84051318414951,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,8.97815601364729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0,0,0,11.7233666103874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,1.28197250745681,1.40266149865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03150133361924,0,0,0,0,0,0,0,0,0,0,14.3341509592271,0,4.22961015263549,45.6622918596056,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,25.9706880599279,9.06957892275394,0.102268682502155,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0.113942055847001,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,12.2977172147529,0,108.483550487557,43.0788339131262,227.303213915309,0,0,0,0,0,0,0,0.586993856796269,0,0.789168805698781,56.865636542872,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,9.43524008506963,0,0,0,0,0.775912131907355,0,0.90392296312213,0,0,0,0,0,25.6143593687223,0,6.91634002339709,0,170.908617870517,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,76.8873266881195,0.472699093843342,0.824158583811665,0.471824806979294,2.85439696392771,0,0,0,0,0,0,0,0,0,0,4.2555081941567,2.93745693555989,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,2.93104467356165,6.62534444561107,0,0,0,0,1.17466153824464,0,5.38510771951354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97661808026378,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55339755099981,0.150420656698515,0,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0.706437835654626,0,1.68163297988273,71.2263801997407,0,0,9.29195074296532,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,2.0611549059201,20.4822113970213,0,0,0,0,0,0.994753875806841,0.118920090777569,0.11294608203896,0,0.150962843566674,52.3240791971865,100.100278710812,3.29222107453066,0.245148321753905,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0,0,0,57.6965746714749,0,0,0.157771562193185,0,0,38.0899325171088,0,0,0,0.126166424835079,0.109265571963696,0,0.61193297845189,0,0.0918948995348449,0,0.303114792872958,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0,0.0717222053926763,0,0,0,0,1.07790242527904,0,3.66724332548599,0,1.33151354837103,0,0 | |||
|short_description=p1@IHH | |||
}} |
Revision as of 16:55, 12 September 2013
Short description: | p1@IHH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IHH_5end |
Coexpression cluster: | C4187_colon_gastrointestinal_small_hepatoblastoma_rectum_stomach_duodenum |
Association with transcript: | -399bp_to_NM_002181_5end |
EntrezGene: | IHH |
HGNC: | 5956 |
UniProt: | Q14623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.29e-28 | 25 |
intestine | 1.01e-25 | 17 |
large intestine | 1.23e-17 | 11 |
lower digestive tract | 3.32e-13 | 5 |
colon | 1.38e-11 | 9 |
subdivision of digestive tract | 7.00e-11 | 118 |
rectum | 1.28e-09 | 4 |
digestive system | 6.57e-09 | 145 |
digestive tract | 6.57e-09 | 145 |
primitive gut | 6.57e-09 | 145 |
small intestine | 3.33e-08 | 4 |
endoderm-derived structure | 1.35e-07 | 160 |
endoderm | 1.35e-07 | 160 |
presumptive endoderm | 1.35e-07 | 160 |
hindgut | 6.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.52e-09 | 14 |
signet ring cell adenocarcinoma | 8.03e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.