FFCP PHASE1:Hg19::chr20:55091858..55091864,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200232|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16100|TSSclassifier=N|UniProt=|association_with_transcript=-378bp_to_ENST00000481560_5end|description=CAGE_peak_5_at_FAM209A_5end|id=chr20:55091858..55091864,+|ontology_enrichment_celltype=CL:0000148!1.73e-22!10;CL:0000541!1.73e-22!10;CL:0002567!5.08e-20!3;CL:0000147!6.57e-16!14;CL:0000710!5.80e-11!20;CL:0000325!3.50e-09!39;CL:0000075!5.77e-08!27;CL:0002566!6.59e-08!1|ontology_enrichment_celltype_v019=CL:0002567;2.27e-84;3!CL:0000148;1.77e-45;10!CL:0000147;1.05e-32;14!CL:0002566;7.48e-30;1!CL:0000710;4.19e-23;20!CL:0000075;2.82e-17;27!CL:0002077;2.04e-12;34|ontology_enrichment_celltype_v019_2=CL:0002567,1.71e-84,3;CL:0000148,1.57e-45,10;CL:0000541,1.57e-45,10;CL:0000147,9.65e-33,14;CL:0002566,7.48e-30,1;CL:0000710,3.96e-23,20;CL:0000075,2.70e-17,27;CL:0002077,7.51e-14,34;CL:0000333,4.64e-11,41;CL:0000133,6.28e-08,59|ontology_enrichment_development_v019=UBERON:0010227;2.73e-29;1|ontology_enrichment_disease=DOID:1909!1.18e-13!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.59e-29!57;UBERON:0005068!2.59e-29!57;UBERON:0006241!2.59e-29!57;UBERON:0007135!2.59e-29!57;UBERON:0002298!2.63e-26!8;UBERON:0002616!6.72e-22!59;UBERON:0001017!4.27e-19!82;UBERON:0003076!9.69e-19!15;UBERON:0003057!9.69e-19!15;UBERON:0000988!1.73e-18!3;UBERON:0006331!2.08e-18!3;UBERON:0003075!2.61e-18!86;UBERON:0007284!2.61e-18!86;UBERON:0005743!4.63e-18!86;UBERON:0000955!5.29e-18!69;UBERON:0006238!5.29e-18!69;UBERON:0002346!2.41e-17!90;UBERON:0007023!1.31e-16!115;UBERON:0000073!4.83e-16!94;UBERON:0001016!4.83e-16!94;UBERON:0002020!4.00e-15!34;UBERON:0003528!4.00e-15!34;UBERON:0001893!4.34e-15!34;UBERON:0002780!5.66e-15!41;UBERON:0001890!5.66e-15!41;UBERON:0006240!5.66e-15!41;UBERON:0003080!1.40e-14!42;UBERON:0002148!7.05e-13!2;UBERON:0009662!7.05e-13!2;UBERON:0002791!1.39e-12!33;UBERON:0004733!2.71e-12!12;UBERON:0002028!2.71e-12!12;UBERON:0007277!2.71e-12!12;UBERON:0004732!2.47e-11!13;UBERON:0002308!6.92e-11!9;UBERON:0000125!6.92e-11!9;UBERON:0001869!2.51e-10!32;UBERON:0004121!9.74e-10!169;UBERON:0003056!1.64e-09!61;UBERON:0004151!1.67e-09!3;UBERON:0000924!2.00e-09!173;UBERON:0006601!2.00e-09!173;UBERON:0002240!4.88e-09!3;UBERON:0001896!5.97e-09!3;UBERON:0005290!5.97e-09!3;UBERON:0010096!5.97e-09!3;UBERON:0000033!7.61e-09!123;UBERON:0002619!1.12e-08!22;UBERON:0000153!2.69e-08!129;UBERON:0007811!2.69e-08!129;UBERON:0000025!3.94e-08!194;UBERON:0002079!8.54e-08!1;UBERON:0002084!1.03e-07!1;UBERON:0002082!1.03e-07!1;UBERON:0004706!1.03e-07!1;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0007190!2.66e-07!1;UBERON:0002038!3.01e-07!1;UBERON:0009661!3.01e-07!1;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0001871!4.24e-07!7;UBERON:0001950!8.09e-07!20|ontology_enrichment_uberon_v019=UBERON:0002079;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0004151;1.04e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.37e-29,1;UBERON:0002081,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0004151,9.90e-11,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44485260045183,1.14596527667483,2.34434894420094,1.71072446022705,0.411309970813294,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=200232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16100 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-378bp_to_ENST00000481560_5end | |||
|description=CAGE_peak_5_at_FAM209A_5end | |||
|id=chr20:55091858..55091864,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.73e-22!10;CL:0000541!1.73e-22!10;CL:0002567!5.08e-20!3;CL:0000147!6.57e-16!14;CL:0000710!5.80e-11!20;CL:0000325!3.50e-09!39;CL:0000075!5.77e-08!27;CL:0002566!6.59e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.27e-84;3!CL:0000148;1.77e-45;10!CL:0000147;1.05e-32;14!CL:0002566;7.48e-30;1!CL:0000710;4.19e-23;20!CL:0000075;2.82e-17;27!CL:0002077;2.04e-12;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.71e-84,3;CL:0000148,1.57e-45,10;CL:0000541,1.57e-45,10;CL:0000147,9.65e-33,14;CL:0002566,7.48e-30,1;CL:0000710,3.96e-23,20;CL:0000075,2.70e-17,27;CL:0002077,7.51e-14,34;CL:0000333,4.64e-11,41;CL:0000133,6.28e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:1909!1.18e-13!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.59e-29!57;UBERON:0005068!2.59e-29!57;UBERON:0006241!2.59e-29!57;UBERON:0007135!2.59e-29!57;UBERON:0002298!2.63e-26!8;UBERON:0002616!6.72e-22!59;UBERON:0001017!4.27e-19!82;UBERON:0003076!9.69e-19!15;UBERON:0003057!9.69e-19!15;UBERON:0000988!1.73e-18!3;UBERON:0006331!2.08e-18!3;UBERON:0003075!2.61e-18!86;UBERON:0007284!2.61e-18!86;UBERON:0005743!4.63e-18!86;UBERON:0000955!5.29e-18!69;UBERON:0006238!5.29e-18!69;UBERON:0002346!2.41e-17!90;UBERON:0007023!1.31e-16!115;UBERON:0000073!4.83e-16!94;UBERON:0001016!4.83e-16!94;UBERON:0002020!4.00e-15!34;UBERON:0003528!4.00e-15!34;UBERON:0001893!4.34e-15!34;UBERON:0002780!5.66e-15!41;UBERON:0001890!5.66e-15!41;UBERON:0006240!5.66e-15!41;UBERON:0003080!1.40e-14!42;UBERON:0002148!7.05e-13!2;UBERON:0009662!7.05e-13!2;UBERON:0002791!1.39e-12!33;UBERON:0004733!2.71e-12!12;UBERON:0002028!2.71e-12!12;UBERON:0007277!2.71e-12!12;UBERON:0004732!2.47e-11!13;UBERON:0002308!6.92e-11!9;UBERON:0000125!6.92e-11!9;UBERON:0001869!2.51e-10!32;UBERON:0004121!9.74e-10!169;UBERON:0003056!1.64e-09!61;UBERON:0004151!1.67e-09!3;UBERON:0000924!2.00e-09!173;UBERON:0006601!2.00e-09!173;UBERON:0002240!4.88e-09!3;UBERON:0001896!5.97e-09!3;UBERON:0005290!5.97e-09!3;UBERON:0010096!5.97e-09!3;UBERON:0000033!7.61e-09!123;UBERON:0002619!1.12e-08!22;UBERON:0000153!2.69e-08!129;UBERON:0007811!2.69e-08!129;UBERON:0000025!3.94e-08!194;UBERON:0002079!8.54e-08!1;UBERON:0002084!1.03e-07!1;UBERON:0002082!1.03e-07!1;UBERON:0004706!1.03e-07!1;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0007190!2.66e-07!1;UBERON:0002038!3.01e-07!1;UBERON:0009661!3.01e-07!1;UBERON:0002902!3.40e-07!1;UBERON:0009899!3.40e-07!1;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0001871!4.24e-07!7;UBERON:0001950!8.09e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.73e-29;1!UBERON:0002081;2.21e-15;2!UBERON:0004151;1.04e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.37e-29,1;UBERON:0002081,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0004151,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44485260045183,1.14596527667483,2.34434894420094,1.71072446022705,0.411309970813294,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.443716206147409,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@FAM209A | |||
}} |
Revision as of 09:16, 12 September 2013
Short description: | p5@FAM209A |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_FAM209A_5end |
Coexpression cluster: | NA |
Association with transcript: | -378bp_to_ENST00000481560_5end |
EntrezGene: | FAM209A |
HGNC: | 16100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.71e-84 | 3 |
melanocyte | 1.57e-45 | 10 |
melanoblast | 1.57e-45 | 10 |
pigment cell | 9.65e-33 | 14 |
dark melanocyte | 7.48e-30 | 1 |
neurecto-epithelial cell | 3.96e-23 | 20 |
columnar/cuboidal epithelial cell | 2.70e-17 | 27 |
ecto-epithelial cell | 7.51e-14 | 34 |
migratory neural crest cell | 4.64e-11 | 41 |
neurectodermal cell | 6.28e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.37e-29 | 1 |
cardiac atrium | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
cardiac chamber | 9.90e-11 | 3 |
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