FFCP PHASE1:Hg19::chr21:17791855..17791869,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=1274|TSSclassifier=S|UniProt=|association_with_transcript=17bp_to_ENST00000453910_5end|coexpression_cluster_id=C4069|description=CAGE_peak_14_at_LINC00478_5end|id=chr21:17791855..17791869,+|ontology_enrichment_celltype=CL:0002139!2.50e-07!24;CL:0000136!8.61e-07!15|ontology_enrichment_celltype_v019=CL:0000128;6.61e-07;7!CL:0000126;6.61e-07;7!CL:0000127;6.61e-07;7|ontology_enrichment_celltype_v019_2=CL:0000136,1.48e-07,15;CL:0000128,6.73e-07,7;CL:0000126,6.73e-07,7;CL:0000127,6.73e-07,7;CL:0002453,6.73e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.25e-12!115;UBERON:0005743!2.31e-10!86;UBERON:0000477!2.78e-10!286;UBERON:0001017!3.43e-10!82;UBERON:0000073!7.40e-10!94;UBERON:0001016!7.40e-10!94;UBERON:0000468!3.62e-09!659;UBERON:0000153!2.87e-08!129;UBERON:0007811!2.87e-08!129;UBERON:0000922!6.15e-08!612;UBERON:0000924!6.37e-08!173;UBERON:0006601!6.37e-08!173;UBERON:0002050!8.40e-08!605;UBERON:0005423!8.40e-08!605;UBERON:0000955!8.60e-08!69;UBERON:0006238!8.60e-08!69;UBERON:0004121!1.31e-07!169;UBERON:0000033!1.34e-07!123;UBERON:0000923!1.86e-07!604;UBERON:0005291!1.86e-07!604;UBERON:0006598!1.86e-07!604;UBERON:0002532!1.86e-07!604;UBERON:0002346!4.34e-07!90;UBERON:0004111!7.59e-07!241;UBERON:0002616!7.87e-07!59;UBERON:0003075!8.75e-07!86;UBERON:0007284!8.75e-07!86;UBERON:0001049!9.18e-07!57;UBERON:0005068!9.18e-07!57;UBERON:0006241!9.18e-07!57;UBERON:0007135!9.18e-07!57|ontology_enrichment_uberon_v019=UBERON:0001044;1.30e-09;6!UBERON:0003293;1.30e-09;6!UBERON:0003294;1.30e-09;6!UBERON:0010047;1.30e-09;6!UBERON:0003408;1.30e-09;6!UBERON:0000167;1.30e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.51e-09,6;UBERON:0003293,1.51e-09,6;UBERON:0003294,1.51e-09,6;UBERON:0010047,1.51e-09,6;UBERON:0000167,1.51e-09,6;UBERON:0006947,5.38e-07,3;UBERON:0004054,5.38e-07,3|phase1_expression=0.181678379270557,0.428201047781966,1.55049844505568,2.00146596706261,0.446961094427288,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,1.10808952269109,1.42800483870977,1.25381888591235,2.57612388417951,1.64249310087461,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,1.80719576192283,1.50401373190767,1.01392563272577,0.795285947051099,0,1.98523116044542,0.221729397462564,0.43917392846563,0.785874452986276,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,0.694281003215189,1.13061588384802,0,0.275118041940067,0.208994966536811,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,2.4406205754817,1.10298924103761,0,1.7859945656816,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.264818361626438,1.43418310374407,1.06400514659507,0,0,0,1.24484414159907,1.0776853765575,0.490385709340376,1.36221684880438,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.943819157121151,0.98110732562673,0.38474715694639,2.21446636387394,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.463721619900307,0.352226082707465,0.288732895522148,0.925971025153221,1.33177906564219,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,1.86156681609409,3.12022310734098,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,2.60279707715243,2.31986643833309,1.34013012267479,2.55175500661265,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0.260650843404249,0.587403472388222,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0,1.02511319404561,1.02341449813341,0.160853921143607,0,0,0,0.821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0.574072240823034,0.728364672026868,0.917870904715969,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.650756789328606,1.33953315142039,0,0,0,0,0,0.096670718292122,0,0,0,0.537101224341368,0.290033387828457,0.426133137080504,0.712256285173899,0,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,1.63799893689583,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000453910_5end | |||
|coexpression_cluster_id=C4069 | |||
|description=CAGE_peak_14_at_LINC00478_5end | |||
|id=chr21:17791855..17791869,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.50e-07!24;CL:0000136!8.61e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000128;6.61e-07;7!CL:0000126;6.61e-07;7!CL:0000127;6.61e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.48e-07,15;CL:0000128,6.73e-07,7;CL:0000126,6.73e-07,7;CL:0000127,6.73e-07,7;CL:0002453,6.73e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-12!115;UBERON:0005743!2.31e-10!86;UBERON:0000477!2.78e-10!286;UBERON:0001017!3.43e-10!82;UBERON:0000073!7.40e-10!94;UBERON:0001016!7.40e-10!94;UBERON:0000468!3.62e-09!659;UBERON:0000153!2.87e-08!129;UBERON:0007811!2.87e-08!129;UBERON:0000922!6.15e-08!612;UBERON:0000924!6.37e-08!173;UBERON:0006601!6.37e-08!173;UBERON:0002050!8.40e-08!605;UBERON:0005423!8.40e-08!605;UBERON:0000955!8.60e-08!69;UBERON:0006238!8.60e-08!69;UBERON:0004121!1.31e-07!169;UBERON:0000033!1.34e-07!123;UBERON:0000923!1.86e-07!604;UBERON:0005291!1.86e-07!604;UBERON:0006598!1.86e-07!604;UBERON:0002532!1.86e-07!604;UBERON:0002346!4.34e-07!90;UBERON:0004111!7.59e-07!241;UBERON:0002616!7.87e-07!59;UBERON:0003075!8.75e-07!86;UBERON:0007284!8.75e-07!86;UBERON:0001049!9.18e-07!57;UBERON:0005068!9.18e-07!57;UBERON:0006241!9.18e-07!57;UBERON:0007135!9.18e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.30e-09;6!UBERON:0003293;1.30e-09;6!UBERON:0003294;1.30e-09;6!UBERON:0010047;1.30e-09;6!UBERON:0003408;1.30e-09;6!UBERON:0000167;1.30e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.51e-09,6;UBERON:0003293,1.51e-09,6;UBERON:0003294,1.51e-09,6;UBERON:0010047,1.51e-09,6;UBERON:0000167,1.51e-09,6;UBERON:0006947,5.38e-07,3;UBERON:0004054,5.38e-07,3 | |||
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| |||
|short_description=p14@LINC00478 | |||
}} |
Revision as of 09:51, 12 September 2013
Short description: | p14@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_LINC00478_5end |
Coexpression cluster: | C4069_medulloblastoma_uterus_cervix_ovary_trachea_heart_throat |
Association with transcript: | 17bp_to_ENST00000453910_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.48e-07 | 15 |
oligodendrocyte | 6.73e-07 | 7 |
macroglial cell | 6.73e-07 | 7 |
astrocyte | 6.73e-07 | 7 |
oligodendrocyte precursor cell | 6.73e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.51e-09 | 6 |
gland of oral region | 1.51e-09 | 6 |
gland of foregut | 1.51e-09 | 6 |
oral gland | 1.51e-09 | 6 |
oral cavity | 1.51e-09 | 6 |
male genital duct | 5.38e-07 | 3 |
internal male genitalia | 5.38e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.