FFCP PHASE1:Hg19::chr3:35683120..35683131,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16968|TSSclassifier=N|UniProt=C9JQQ6|association_with_transcript=207bp_to_ENST00000449196_5end|coexpression_cluster_id=C28|description=CAGE_peak_33_at_ARPP21_5end|id=chr3:35683120..35683131,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000084;2.50e-07;25|ontology_enrichment_celltype_v019_2=CL:0000084,2.58e-07,25;CL:0000827,2.58e-07,25|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!2.37e-37!20;UBERON:0002619!6.08e-34!22;UBERON:0001869!2.96e-32!32;UBERON:0001049!1.23e-30!57;UBERON:0005068!1.23e-30!57;UBERON:0006241!1.23e-30!57;UBERON:0007135!1.23e-30!57;UBERON:0002020!2.20e-30!34;UBERON:0003528!2.20e-30!34;UBERON:0001893!2.82e-30!34;UBERON:0000956!8.26e-30!25;UBERON:0000203!8.26e-30!25;UBERON:0002616!1.65e-29!59;UBERON:0000955!1.48e-27!69;UBERON:0006238!1.48e-27!69;UBERON:0002791!1.40e-26!33;UBERON:0001017!1.27e-25!82;UBERON:0002780!7.85e-25!41;UBERON:0001890!7.85e-25!41;UBERON:0006240!7.85e-25!41;UBERON:0005743!2.71e-24!86;UBERON:0003080!3.37e-24!42;UBERON:0000073!1.06e-21!94;UBERON:0001016!1.06e-21!94;UBERON:0003075!2.49e-19!86;UBERON:0007284!2.49e-19!86;UBERON:0002346!2.46e-18!90;UBERON:0000153!4.20e-17!129;UBERON:0007811!4.20e-17!129;UBERON:0003056!4.81e-16!61;UBERON:0000033!3.79e-14!123;UBERON:0002021!4.58e-13!5;UBERON:0001872!4.98e-13!5;UBERON:0007023!5.17e-12!115;UBERON:0004121!1.24e-10!169;UBERON:0000924!2.62e-10!173;UBERON:0006601!2.62e-10!173;UBERON:0004733!1.69e-09!12;UBERON:0002028!1.69e-09!12;UBERON:0007277!1.69e-09!12;UBERON:0004732!8.88e-09!13;UBERON:0000064!1.20e-08!219;UBERON:0002370!2.69e-08!4;UBERON:0005058!2.69e-08!4;UBERON:0009113!2.69e-08!4;UBERON:0003295!2.69e-08!4;UBERON:0005562!2.69e-08!4;UBERON:0001871!4.12e-08!7;UBERON:0002022!4.72e-08!1;UBERON:0002902!5.43e-08!1;UBERON:0009899!5.43e-08!1;UBERON:0007190!5.82e-08!1;UBERON:0001882!7.16e-08!1;UBERON:0005403!7.16e-08!1;UBERON:0000025!7.89e-08!194;UBERON:0003076!1.27e-07!15;UBERON:0003057!1.27e-07!15;UBERON:0002680!1.83e-07!9;UBERON:0001895!1.83e-07!9;UBERON:0010092!1.83e-07!9|ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0002021;3.22e-09;5!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19;UBERON:0002021,2.97e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,1.06712765022621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,1.51243017733031,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |||
|TSSclassifier=N | |||
|UniProt=C9JQQ6 | |||
|association_with_transcript=207bp_to_ENST00000449196_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_33_at_ARPP21_5end | |||
|id=chr3:35683120..35683131,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.50e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.58e-07,25;CL:0000827,2.58e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;1.05e-79;2!UBERON:0005058;1.05e-79;2!UBERON:0009113;1.05e-79;2!UBERON:0004177;1.05e-32;5!UBERON:0005057;1.05e-32;5!UBERON:0002021;3.22e-09;5!UBERON:0000077;6.43e-07;27!UBERON:0002405;6.43e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.48e-40,4;UBERON:0005058,1.48e-40,4;UBERON:0009113,1.48e-40,4;UBERON:0003295,1.48e-40,4;UBERON:0005562,1.48e-40,4;UBERON:0003351,1.82e-27,6;UBERON:0004177,1.02e-23,7;UBERON:0005057,1.02e-23,7;UBERON:0000974,5.90e-17,10;UBERON:0003408,5.90e-17,10;UBERON:0001042,5.90e-17,10;UBERON:0009145,5.90e-17,10;UBERON:0006562,1.62e-15,11;UBERON:0009722,1.62e-15,11;UBERON:0007690,1.62e-15,11;UBERON:0008814,6.79e-10,18;UBERON:0001557,1.99e-09,19;UBERON:0002021,2.97e-09,5 | |||
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|short_description=p33@ARPP21 | |||
}} |
Revision as of 23:56, 12 September 2013
Short description: | p33@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_ARPP21_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 207bp_to_ENST00000449196_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | C9JQQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.58e-07 | 25 |
pro-T cell | 2.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.48e-40 | 4 |
hemolymphoid system gland | 1.48e-40 | 4 |
thymic region | 1.48e-40 | 4 |
pharyngeal gland | 1.48e-40 | 4 |
thymus primordium | 1.48e-40 | 4 |
pharyngeal epithelium | 1.82e-27 | 6 |
hemopoietic organ | 1.02e-23 | 7 |
immune organ | 1.02e-23 | 7 |
neck | 5.90e-17 | 10 |
gland of gut | 5.90e-17 | 10 |
chordate pharynx | 5.90e-17 | 10 |
pharyngeal region of foregut | 5.90e-17 | 10 |
pharynx | 1.62e-15 | 11 |
entire pharyngeal arch endoderm | 1.62e-15 | 11 |
early pharyngeal endoderm | 1.62e-15 | 11 |
pharyngeal arch system | 6.79e-10 | 18 |
upper respiratory tract | 1.99e-09 | 19 |
occipital lobe | 2.97e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.