FFCP PHASE1:Hg19::chr3:58196782..58196793,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2959|TSSclassifier=S|UniProt=Q13609|association_with_transcript=-52bp_to_uc003djo.1,uc011bfd.1_5end|coexpression_cluster_id=C63|description=CAGE_peak_6_at_DNASE1L3_5end|id=chr3:58196782..58196793,-|ontology_enrichment_celltype=CL:0002617!7.61e-08!2;CL:0000136!1.76e-07!15|ontology_enrichment_celltype_v019=CL:0002262;3.81e-08;2!CL:1000398;3.81e-08;2!CL:0001014;6.35e-08;2!CL:0002617;6.35e-08;2!CL:0001016;6.35e-08;2|ontology_enrichment_celltype_v019_2=CL:0002262,3.82e-08,2;CL:1000398,3.82e-08,2;CL:0002617,7.52e-08,2;CL:0001014,8.04e-08,2;CL:0001016,8.04e-08,2|ontology_enrichment_development_v019=UBERON:0010115;1.50e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.31e-14!115;UBERON:0009569!3.21e-08!113;UBERON:0002360!3.44e-08!2;UBERON:0000094!3.44e-08!2;UBERON:0007645!3.44e-08!2;UBERON:0002417!8.40e-07!61;UBERON:0000916!8.40e-07!61|ontology_enrichment_uberon_v019=UBERON:0002363;1.50e-14;1!UBERON:0002107;1.73e-11;19!UBERON:0006925;1.73e-11;19!UBERON:0002423;8.68e-09;25!UBERON:0001281;3.81e-08;2!UBERON:0003497;3.81e-08;2!UBERON:0003909;3.81e-08;2!UBERON:0003835;3.81e-08;2!UBERON:0000341;6.35e-08;2!UBERON:0002360;6.35e-08;2!UBERON:0000094;6.35e-08;2!UBERON:0010743;6.35e-08;2!UBERON:0002365;4.49e-07;31!UBERON:0002330;4.49e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.23e-14,1;UBERON:0007645,1.23e-14,1;UBERON:0007647,1.23e-14,1;UBERON:0010115,1.23e-14,1;UBERON:0002107,1.41e-11,19;UBERON:0006925,1.41e-11,19;UBERON:0008836,1.41e-11,19;UBERON:0002417,2.42e-10,60;UBERON:0000916,2.42e-10,60;UBERON:0008835,4.95e-10,22;UBERON:0003894,4.95e-10,22;UBERON:0009854,1.32e-09,23;UBERON:0007499,7.44e-09,25;UBERON:0009497,7.44e-09,25;UBERON:0000015,7.44e-09,25;UBERON:0002423,7.44e-09,25;UBERON:0006235,7.44e-09,25;UBERON:0004161,7.44e-09,25;UBERON:0005172,1.24e-08,54;UBERON:0005173,1.24e-08,54;UBERON:0009856,1.60e-08,26;UBERON:0001281,3.82e-08,2;UBERON:0003497,3.82e-08,2;UBERON:0003909,3.82e-08,2;UBERON:0003835,3.82e-08,2;UBERON:0002360,5.74e-08,2;UBERON:0000094,5.74e-08,2;UBERON:0010743,5.74e-08,2;UBERON:0000341,8.60e-08,2;UBERON:0002365,3.53e-07,31;UBERON:0002330,3.53e-07,31;UBERON:0009569,8.14e-07,112|phase1_expression=1.2717486548939,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2394200017423,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,1.49730843868477,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0,0,0,0.747511887973863,0,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1419323727215,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,3.47740496525458,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0,0,0,0,0.25458863311266,0.202117188958219,0,0,0.26940821205835,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p6@DNASE1L3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |||
|TSSclassifier=S | |||
|UniProt=Q13609 | |||
|association_with_transcript=-52bp_to_uc003djo.1,uc011bfd.1_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_6_at_DNASE1L3_5end | |||
|id=chr3:58196782..58196793,- | |||
|ontology_enrichment_celltype=CL:0002617!7.61e-08!2;CL:0000136!1.76e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002262;3.81e-08;2!CL:1000398;3.81e-08;2!CL:0001014;6.35e-08;2!CL:0002617;6.35e-08;2!CL:0001016;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,3.82e-08,2;CL:1000398,3.82e-08,2;CL:0002617,7.52e-08,2;CL:0001014,8.04e-08,2;CL:0001016,8.04e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.50e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.31e-14!115;UBERON:0009569!3.21e-08!113;UBERON:0002360!3.44e-08!2;UBERON:0000094!3.44e-08!2;UBERON:0007645!3.44e-08!2;UBERON:0002417!8.40e-07!61;UBERON:0000916!8.40e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.50e-14;1!UBERON:0002107;1.73e-11;19!UBERON:0006925;1.73e-11;19!UBERON:0002423;8.68e-09;25!UBERON:0001281;3.81e-08;2!UBERON:0003497;3.81e-08;2!UBERON:0003909;3.81e-08;2!UBERON:0003835;3.81e-08;2!UBERON:0000341;6.35e-08;2!UBERON:0002360;6.35e-08;2!UBERON:0000094;6.35e-08;2!UBERON:0010743;6.35e-08;2!UBERON:0002365;4.49e-07;31!UBERON:0002330;4.49e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.23e-14,1;UBERON:0007645,1.23e-14,1;UBERON:0007647,1.23e-14,1;UBERON:0010115,1.23e-14,1;UBERON:0002107,1.41e-11,19;UBERON:0006925,1.41e-11,19;UBERON:0008836,1.41e-11,19;UBERON:0002417,2.42e-10,60;UBERON:0000916,2.42e-10,60;UBERON:0008835,4.95e-10,22;UBERON:0003894,4.95e-10,22;UBERON:0009854,1.32e-09,23;UBERON:0007499,7.44e-09,25;UBERON:0009497,7.44e-09,25;UBERON:0000015,7.44e-09,25;UBERON:0002423,7.44e-09,25;UBERON:0006235,7.44e-09,25;UBERON:0004161,7.44e-09,25;UBERON:0005172,1.24e-08,54;UBERON:0005173,1.24e-08,54;UBERON:0009856,1.60e-08,26;UBERON:0001281,3.82e-08,2;UBERON:0003497,3.82e-08,2;UBERON:0003909,3.82e-08,2;UBERON:0003835,3.82e-08,2;UBERON:0002360,5.74e-08,2;UBERON:0000094,5.74e-08,2;UBERON:0010743,5.74e-08,2;UBERON:0000341,8.60e-08,2;UBERON:0002365,3.53e-07,31;UBERON:0002330,3.53e-07,31;UBERON:0009569,8.14e-07,112 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2394200017423,0,0,0,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,1.49730843868477,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,1.32506888912221,0,0,0,0,0.747511887973863,0,0.414239055347196,0.992332043623902,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.1419323727215,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,3.47740496525458,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0,0,0,0,0.25458863311266,0.202117188958219,0,0,0.26940821205835,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@DNASE1L3 | |||
}} |
Revision as of 01:00, 13 September 2013
Short description: | p6@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_DNASE1L3_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -52bp_to_uc003djo.1, uc011bfd.1_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | Q13609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 3.82e-08 | 2 |
endothelial cell of hepatic sinusoid | 3.82e-08 | 2 |
adipocyte of breast | 7.52e-08 | 2 |
CD1a-positive Langerhans cell | 8.04e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.23e-14 | 1 |
future meninx | 1.23e-14 | 1 |
ectomeninx | 1.23e-14 | 1 |
future dura mater | 1.23e-14 | 1 |
liver | 1.41e-11 | 19 |
digestive gland | 1.41e-11 | 19 |
liver bud | 1.41e-11 | 19 |
abdominal segment of trunk | 2.42e-10 | 60 |
abdomen | 2.42e-10 | 60 |
hepatic diverticulum | 4.95e-10 | 22 |
liver primordium | 4.95e-10 | 22 |
digestive tract diverticulum | 1.32e-09 | 23 |
epithelial sac | 7.44e-09 | 25 |
epithelium of foregut-midgut junction | 7.44e-09 | 25 |
anatomical boundary | 7.44e-09 | 25 |
hepatobiliary system | 7.44e-09 | 25 |
foregut-midgut junction | 7.44e-09 | 25 |
septum transversum | 7.44e-09 | 25 |
abdomen element | 1.24e-08 | 54 |
abdominal segment element | 1.24e-08 | 54 |
sac | 1.60e-08 | 26 |
hepatic sinusoid | 3.82e-08 | 2 |
abdomen blood vessel | 3.82e-08 | 2 |
sinusoid | 3.82e-08 | 2 |
abdominal segment blood vessel | 3.82e-08 | 2 |
meninx | 5.74e-08 | 2 |
membrane organ | 5.74e-08 | 2 |
meningeal cluster | 5.74e-08 | 2 |
throat | 8.60e-08 | 2 |
exocrine gland | 3.53e-07 | 31 |
exocrine system | 3.53e-07 | 31 |
subdivision of trunk | 8.14e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.