FFCP PHASE1:Hg19::chr3:100328439..100328459,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84873|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19241|TSSclassifier=S|UniProt=Q96K78,Q6ZMH4|association_with_transcript=6bp_to_ENST00000273352,NM_032787,uc003duc.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_GPR128_5end|id=chr3:100328439..100328459,+|ontology_enrichment_celltype=CL:0002563!1.47e-10!4|ontology_enrichment_celltype_v019=CL:0002563;2.04e-07;4|ontology_enrichment_celltype_v019_2=CL:0002563,2.04e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:178!1.10e-10!1;DOID:326!1.10e-10!1;DOID:3978!1.10e-10!1;DOID:3394!1.10e-10!1;DOID:5844!1.10e-10!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.54e-27!27;UBERON:0001155!1.25e-26!9;UBERON:0000059!8.70e-22!11;UBERON:0005409!1.40e-20!35;UBERON:0001154!7.46e-11!1;UBERON:0001153!7.46e-11!1;UBERON:0006834!1.46e-10!1;UBERON:0001242!1.47e-10!4;UBERON:0001262!1.47e-10!4;UBERON:0004786!1.47e-10!4;UBERON:0004808!1.47e-10!4;UBERON:0001277!1.47e-10!4;UBERON:0003350!1.27e-08!5;UBERON:0004907!1.48e-08!5|ontology_enrichment_uberon_v019=UBERON:0000160;2.57e-49;17!UBERON:0002108;2.56e-45;4!UBERON:0005409;1.10e-38;22!UBERON:0004921;1.06e-23;33!UBERON:0001155;5.52e-12;9!UBERON:0001555;3.28e-10;54!UBERON:0000059;5.54e-10;11!UBERON:0002114;1.41e-09;2!UBERON:0001242;2.04e-07;4!UBERON:0001262;2.04e-07;4!UBERON:0004786;2.04e-07;4!UBERON:0004808;2.04e-07;4!UBERON:0001277;2.04e-07;4!UBERON:0001007;2.97e-07;81!UBERON:0000922;6.95e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.57e-49,17;UBERON:0002108,2.56e-45,4;UBERON:0005409,2.91e-34,25;UBERON:0001155,5.52e-12,9;UBERON:0000059,5.54e-10,11;UBERON:0002114,1.41e-09,2;UBERON:0004921,1.38e-07,118;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82873408649161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0.995261931078505,16.0108191751044,5.49927130440263,0,0,0,0,0,0,0,0,0,0,18.1486074072996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44788587147224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3208151417832,39.3407208907123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3417783749466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p1@GPR128}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84873 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19241 | |||
|TSSclassifier=S | |||
|UniProt=Q96K78,Q6ZMH4 | |||
|association_with_transcript=6bp_to_ENST00000273352,NM_032787,uc003duc.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_GPR128_5end | |||
|id=chr3:100328439..100328459,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.47e-10!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.04e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!1.10e-10!1;DOID:326!1.10e-10!1;DOID:3978!1.10e-10!1;DOID:3394!1.10e-10!1;DOID:5844!1.10e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.54e-27!27;UBERON:0001155!1.25e-26!9;UBERON:0000059!8.70e-22!11;UBERON:0005409!1.40e-20!35;UBERON:0001154!7.46e-11!1;UBERON:0001153!7.46e-11!1;UBERON:0006834!1.46e-10!1;UBERON:0001242!1.47e-10!4;UBERON:0001262!1.47e-10!4;UBERON:0004786!1.47e-10!4;UBERON:0004808!1.47e-10!4;UBERON:0001277!1.47e-10!4;UBERON:0003350!1.27e-08!5;UBERON:0004907!1.48e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.57e-49;17!UBERON:0002108;2.56e-45;4!UBERON:0005409;1.10e-38;22!UBERON:0004921;1.06e-23;33!UBERON:0001155;5.52e-12;9!UBERON:0001555;3.28e-10;54!UBERON:0000059;5.54e-10;11!UBERON:0002114;1.41e-09;2!UBERON:0001242;2.04e-07;4!UBERON:0001262;2.04e-07;4!UBERON:0004786;2.04e-07;4!UBERON:0004808;2.04e-07;4!UBERON:0001277;2.04e-07;4!UBERON:0001007;2.97e-07;81!UBERON:0000922;6.95e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.57e-49,17;UBERON:0002108,2.56e-45,4;UBERON:0005409,2.91e-34,25;UBERON:0001155,5.52e-12,9;UBERON:0000059,5.54e-10,11;UBERON:0002114,1.41e-09,2;UBERON:0004921,1.38e-07,118;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82873408649161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0.995261931078505,16.0108191751044,5.49927130440263,0,0,0,0,0,0,0,0,0,0,18.1486074072996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44788587147224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.743614585554013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3208151417832,39.3407208907123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3417783749466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@GPR128 | |||
}} |
Revision as of 20:25, 12 September 2013
Short description: | p1@GPR128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPR128_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 6bp_to_ENST00000273352, NM_032787, uc003duc.2_5end |
EntrezGene: | GPR128 |
HGNC: | 19241 |
UniProt: | Q96K78Q6ZMH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.57e-49 | 17 |
small intestine | 2.56e-45 | 4 |
gastrointestinal system | 2.91e-34 | 25 |
colon | 5.52e-12 | 9 |
large intestine | 5.54e-10 | 11 |
duodenum | 1.41e-09 | 2 |
subdivision of digestive tract | 1.38e-07 | 118 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.