FFCP PHASE1:Hg19::chr3:107938309..107938325,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55081|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17367|TSSclassifier=S|UniProt=|association_with_transcript=65bp_to_ENST00000485979_5end|coexpression_cluster_id=C47|description=CAGE_peak_5_at_IFT57_5end|id=chr3:107938309..107938325,-|ontology_enrichment_celltype=CL:0000945!7.60e-17!24;CL:0000826!7.60e-17!24;CL:0000236!8.46e-14!14|ontology_enrichment_celltype_v019=CL:0000236;3.59e-82;13!CL:0000945;4.82e-68;24!CL:0000542;2.45e-26;53!CL:0000785;5.70e-09;1!CL:0000819;5.70e-09;1|ontology_enrichment_celltype_v019_2=CL:0000236,3.49e-76,14;CL:0000945,6.45e-68,24;CL:0000826,6.45e-68,24;CL:0000542,2.16e-33,53;CL:0000051,2.16e-33,53;CL:0000838,7.22e-30,52;CL:0002087,1.29e-13,115;CL:0002031,3.20e-11,120;CL:0000738,4.62e-11,136;CL:0002032,3.34e-10,161;CL:0000837,3.34e-10,161;CL:0000037,1.20e-09,168;CL:0000988,5.38e-09,177;CL:0000819,5.70e-09,1|ontology_enrichment_development_v019=CL:0000051;2.45e-26;53!UBERON:0001045;1.32e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;5.70e-09;1!DOID:8675;5.70e-09;1!DOID:12603;1.32e-08;1!DOID:0060058;2.69e-07;10|ontology_enrichment_disease_v019_2=DOID:0060073,5.70e-09,1;DOID:8675,5.70e-09,1;DOID:12603,1.13e-08,1;DOID:0060058,3.00e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000029;1.32e-08;1!UBERON:0001154;1.32e-08;1!UBERON:0001153;1.32e-08;1!UBERON:0009854;1.32e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0000029,1.05e-08,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,8.75379366557408,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,21.1195493353587,16.9302969491261,28.4642961236338,13.2286368995617,12.4122755981164,16.0930683187255,1.32208974556972,21.9432363543134,2.84606484554724,4.69789751496751,2.6759125968766,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0.620304078368662,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,1.03850885836724,0,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.64544909234478,0,0,0,0.106824071127473,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0,0.201799707191048,1.27753871307098,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0.755798243562828,0,1.23084805461069,0,0,0,0,0.591860433821602,0,0,0,0,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0.432777279484182,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,5.65609846568565,0,0,0,1.20990716048664,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0,0.52418000472609,0.343972064943233,0,0,0,0.387956065953678,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.320362237703084,0.314408610199332,0,1.48849806543585,0,1.09613338542806,0,0,0,0.306345576763462,0.327872630709804,0,0,0.610131324509816,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.680117776536817,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.983091635014877,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0.733714394086716,0.462102664601353,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0.697448552208751,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,1.03382309777839,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,0,0,0,0.109265571963696,0.126698501011437,0,0.26721740526556,0,0,0.303114792872958,1.87574891109325,0,0,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0.217716747896961,0.684466602170562,0.606168477131288,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,1.61019034872821,0.320568492303233|short_description=p5@IFT57}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55081 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17367 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=65bp_to_ENST00000485979_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_5_at_IFT57_5end | |||
|id=chr3:107938309..107938325,- | |||
|ontology_enrichment_celltype=CL:0000945!7.60e-17!24;CL:0000826!7.60e-17!24;CL:0000236!8.46e-14!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.59e-82;13!CL:0000945;4.82e-68;24!CL:0000542;2.45e-26;53!CL:0000785;5.70e-09;1!CL:0000819;5.70e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.49e-76,14;CL:0000945,6.45e-68,24;CL:0000826,6.45e-68,24;CL:0000542,2.16e-33,53;CL:0000051,2.16e-33,53;CL:0000838,7.22e-30,52;CL:0002087,1.29e-13,115;CL:0002031,3.20e-11,120;CL:0000738,4.62e-11,136;CL:0002032,3.34e-10,161;CL:0000837,3.34e-10,161;CL:0000037,1.20e-09,168;CL:0000988,5.38e-09,177;CL:0000819,5.70e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.45e-26;53!UBERON:0001045;1.32e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;5.70e-09;1!DOID:8675;5.70e-09;1!DOID:12603;1.32e-08;1!DOID:0060058;2.69e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.70e-09,1;DOID:8675,5.70e-09,1;DOID:12603,1.13e-08,1;DOID:0060058,3.00e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.32e-08;1!UBERON:0001154;1.32e-08;1!UBERON:0001153;1.32e-08;1!UBERON:0009854;1.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,8.36e-09,1;UBERON:0001153,8.36e-09,1;UBERON:0001045,8.36e-09,1;UBERON:0000029,1.05e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,8.75379366557408,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,21.1195493353587,16.9302969491261,28.4642961236338,13.2286368995617,12.4122755981164,16.0930683187255,1.32208974556972,21.9432363543134,2.84606484554724,4.69789751496751,2.6759125968766,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.347534457872331,0,0.343143423810856,0.620304078368662,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,1.03850885836724,0,0.120859449591622,0,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.64544909234478,0,0,0,0.106824071127473,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0.626719583092093,0,0,0,0.201799707191048,1.27753871307098,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0.755798243562828,0,1.23084805461069,0,0,0,0,0.591860433821602,0,0,0,0,0,0.260427761085233,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0.432777279484182,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,5.65609846568565,0,0,0,1.20990716048664,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0,0.52418000472609,0.343972064943233,0,0,0,0.387956065953678,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.320362237703084,0.314408610199332,0,1.48849806543585,0,1.09613338542806,0,0,0,0.306345576763462,0.327872630709804,0,0,0.610131324509816,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0,0,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0.318593534327405,0,0.310525913752519,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.680117776536817,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.983091635014877,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0.733714394086716,0.462102664601353,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0.535701835878287,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0.697448552208751,0,0,0,0.17071847709395,0,0,0,0.170426809518315,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,1.03382309777839,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,0,0,0,0.109265571963696,0.126698501011437,0,0.26721740526556,0,0,0.303114792872958,1.87574891109325,0,0,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0,0.202117188958219,0.217716747896961,0.684466602170562,0.606168477131288,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,1.61019034872821,0.320568492303233 | |||
|short_description=p5@IFT57 | |||
}} |
Revision as of 20:39, 12 September 2013
Short description: | p5@IFT57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_IFT57_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 65bp_to_ENST00000485979_5end |
EntrezGene: | IFT57 |
HGNC: | 17367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.49e-76 | 14 |
lymphocyte of B lineage | 6.45e-68 | 24 |
pro-B cell | 6.45e-68 | 24 |
lymphocyte | 2.16e-33 | 53 |
common lymphoid progenitor | 2.16e-33 | 53 |
lymphoid lineage restricted progenitor cell | 7.22e-30 | 52 |
nongranular leukocyte | 1.29e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-11 | 120 |
leukocyte | 4.62e-11 | 136 |
hematopoietic oligopotent progenitor cell | 3.34e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.34e-10 | 161 |
hematopoietic stem cell | 1.20e-09 | 168 |
hematopoietic cell | 5.38e-09 | 177 |
B-1 B cell | 5.70e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 8.36e-09 | 1 |
caecum | 8.36e-09 | 1 |
midgut | 8.36e-09 | 1 |
lymph node | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.70e-09 | 1 |
lymphosarcoma | 5.70e-09 | 1 |
acute leukemia | 1.13e-08 | 1 |
lymphoma | 3.00e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.