FFCP PHASE1:Hg19::chr4:26491909..26491918,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1570|TSSclassifier=S|UniProt=P32238|association_with_transcript=123bp_to_NM_000730,uc003gse.1_5end|coexpression_cluster_id=C4405|description=CAGE_peak_2_at_CCKAR_5end|id=chr4:26491909..26491918,-|ontology_enrichment_celltype=CL:0000135!5.87e-10!3;CL:0000386!5.87e-10!3;CL:0000388!5.87e-10!3;CL:0000062!4.19e-09!11;CL:0000375!4.19e-09!11;CL:0000335!4.19e-09!11;CL:0000630!4.50e-08!9|ontology_enrichment_celltype_v019=CL:0000135;8.54e-28;3!CL:0000388;8.54e-28;3!CL:0000062;2.09e-24;9!CL:0000228;5.30e-10;1!CL:0002372;5.30e-10;1!CL:0000499;9.14e-08;28|ontology_enrichment_celltype_v019_2=CL:0000135,9.35e-28,3;CL:0000388,9.35e-28,3;CL:0000062,5.61e-20,11;CL:0000375,5.61e-20,11;CL:0000335,5.61e-20,11;CL:0000228,4.85e-10,1;CL:0002372,4.85e-10,1;CL:0000499,8.62e-08,28|ontology_enrichment_development_v019=CL:0000335;5.83e-20;11!UBERON:0006242;1.89e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002308!3.28e-13!9;UBERON:0000125!3.28e-13!9;UBERON:0000043!5.87e-10!3;UBERON:0007023!6.54e-10!115;UBERON:0002420!7.47e-10!9;UBERON:0007245!7.47e-10!9;UBERON:0010009!7.47e-10!9;UBERON:0010011!7.47e-10!9;UBERON:0000454!7.47e-10!9;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002020!3.16e-09!34;UBERON:0003528!3.16e-09!34;UBERON:0009663!4.14e-09!7;UBERON:0006331!1.99e-08!3;UBERON:0002616!6.61e-08!59;UBERON:0005743!2.86e-07!86;UBERON:0001017!5.46e-07!82;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0002346!5.52e-07!90;UBERON:0000341!9.61e-07!2|ontology_enrichment_uberon_v019=UBERON:0007846;8.54e-28;3!UBERON:0000043;8.54e-28;3!UBERON:0007845;8.54e-28;3!UBERON:0002372;8.99e-10;1!UBERON:0001961;8.99e-10;1!UBERON:0001744;8.99e-10;1!UBERON:0001042;8.99e-10;1!UBERON:0001735;8.99e-10;1!UBERON:0001474;5.97e-08;18|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.35e-28,3;UBERON:0000043,9.35e-28,3;UBERON:0007845,9.35e-28,3;UBERON:0002372,8.99e-10,1;UBERON:0001961,8.99e-10,1;UBERON:0001744,8.99e-10,1;UBERON:0001735,8.99e-10,1|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0.50133791063589,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70851489754947,0,0,5.97803038681893,9.58719676416856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23190734020714,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,1.89662506280697,0.501689773854853,0,0,0,0,0,0,0,0,0,3.29650073346036,3.71292749642646,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,10.886102731707,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,1.0062716070103,3.55924488638614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,3.34155364283279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,5.84269110597214,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,9.29987545416878,18.9492007738881,10.8156640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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1570 | |||
|TSSclassifier=S | |||
|UniProt=P32238 | |||
|association_with_transcript=123bp_to_NM_000730,uc003gse.1_5end | |||
|coexpression_cluster_id=C4405 | |||
|description=CAGE_peak_2_at_CCKAR_5end | |||
|id=chr4:26491909..26491918,- | |||
|ontology_enrichment_celltype=CL:0000135!5.87e-10!3;CL:0000386!5.87e-10!3;CL:0000388!5.87e-10!3;CL:0000062!4.19e-09!11;CL:0000375!4.19e-09!11;CL:0000335!4.19e-09!11;CL:0000630!4.50e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000135;8.54e-28;3!CL:0000388;8.54e-28;3!CL:0000062;2.09e-24;9!CL:0000228;5.30e-10;1!CL:0002372;5.30e-10;1!CL:0000499;9.14e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.35e-28,3;CL:0000388,9.35e-28,3;CL:0000062,5.61e-20,11;CL:0000375,5.61e-20,11;CL:0000335,5.61e-20,11;CL:0000228,4.85e-10,1;CL:0002372,4.85e-10,1;CL:0000499,8.62e-08,28 | |||
|ontology_enrichment_development_v019=CL:0000335;5.83e-20;11!UBERON:0006242;1.89e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002308!3.28e-13!9;UBERON:0000125!3.28e-13!9;UBERON:0000043!5.87e-10!3;UBERON:0007023!6.54e-10!115;UBERON:0002420!7.47e-10!9;UBERON:0007245!7.47e-10!9;UBERON:0010009!7.47e-10!9;UBERON:0010011!7.47e-10!9;UBERON:0000454!7.47e-10!9;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002020!3.16e-09!34;UBERON:0003528!3.16e-09!34;UBERON:0009663!4.14e-09!7;UBERON:0006331!1.99e-08!3;UBERON:0002616!6.61e-08!59;UBERON:0005743!2.86e-07!86;UBERON:0001017!5.46e-07!82;UBERON:0000955!5.51e-07!69;UBERON:0006238!5.51e-07!69;UBERON:0002346!5.52e-07!90;UBERON:0000341!9.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.54e-28;3!UBERON:0000043;8.54e-28;3!UBERON:0007845;8.54e-28;3!UBERON:0002372;8.99e-10;1!UBERON:0001961;8.99e-10;1!UBERON:0001744;8.99e-10;1!UBERON:0001042;8.99e-10;1!UBERON:0001735;8.99e-10;1!UBERON:0001474;5.97e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.35e-28,3;UBERON:0000043,9.35e-28,3;UBERON:0007845,9.35e-28,3;UBERON:0002372,8.99e-10,1;UBERON:0001961,8.99e-10,1;UBERON:0001744,8.99e-10,1;UBERON:0001735,8.99e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,0.50133791063589,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70851489754947,0,0,5.97803038681893,9.58719676416856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23190734020714,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,1.89662506280697,0.501689773854853,0,0,0,0,0,0,0,0,0,3.29650073346036,3.71292749642646,0,0,0,0.096670718292122,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89996871767898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0,0,10.886102731707,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,1.0062716070103,3.55924488638614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,3.34155364283279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,5.84269110597214,0,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,9.29987545416878,18.9492007738881,10.8156640530947,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,2.13233981900981,0.714193294391221,0,0.0620747142958579,0,0,0,0,0,1.21233695426258,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@CCKAR | |||
}} |
Revision as of 10:37, 13 September 2013
Short description: | p2@CCKAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CCKAR_5end |
Coexpression cluster: | C4405_tenocyte_Osteoblast_gall_temporal_duodenum_stomach_peripheral |
Association with transcript: | 123bp_to_NM_000730, uc003gse.1_5end |
EntrezGene: | CCKAR |
HGNC: | 1570 |
UniProt: | P32238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.35e-28 | 3 |
tendon cell | 9.35e-28 | 3 |
osteoblast | 5.61e-20 | 11 |
osteoprogenitor cell | 5.61e-20 | 11 |
mesenchyme condensation cell | 5.61e-20 | 11 |
multinucleate cell | 4.85e-10 | 1 |
myotube | 4.85e-10 | 1 |
stromal cell | 8.62e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.35e-28 | 3 |
tendon | 9.35e-28 | 3 |
regular connective tissue | 9.35e-28 | 3 |
tonsil | 8.99e-10 | 1 |
mucosa-associated lymphoid tissue | 8.99e-10 | 1 |
lymphoid tissue | 8.99e-10 | 1 |
tonsillar ring | 8.99e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.