FFCP PHASE1:Hg19::chr4:54457785..54457795,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84708|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6657|TSSclassifier=S|UniProt=Q8TBB1|association_with_transcript=-2bp_to_ENST00000263925_5end|description=CAGE_peak_10_at_LNX1_5end|id=chr4:54457785..54457795,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;1.45e-15;5!UBERON:0003918;3.62e-08;10!UBERON:0007687;3.62e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;2.47e-19;1!DOID:1357;2.47e-19;1|ontology_enrichment_disease_v019_2=DOID:0050619,1.08e-19,1;DOID:1357,1.08e-19,1|ontology_enrichment_uberon=UBERON:0004921!2.26e-12!129;UBERON:0004185!2.26e-12!129;UBERON:0001007!1.36e-11!155;UBERON:0001555!1.36e-11!155;UBERON:0007026!1.36e-11!155;UBERON:0004119!1.49e-11!169;UBERON:0000925!1.49e-11!169;UBERON:0006595!1.49e-11!169;UBERON:0006562!1.52e-10!11;UBERON:0007023!5.87e-10!115;UBERON:0000065!1.57e-09!53;UBERON:0001004!4.94e-09!72;UBERON:0000077!7.16e-09!130;UBERON:0001041!8.07e-09!98;UBERON:0001042!1.42e-08!10;UBERON:0009145!1.42e-08!10;UBERON:0001723!1.49e-08!3;UBERON:0001033!1.49e-08!3;UBERON:0010056!1.49e-08!3;UBERON:0005178!3.10e-08!34;UBERON:0002224!3.10e-08!34;UBERON:0005181!6.34e-08!35;UBERON:0008814!7.75e-08!15|ontology_enrichment_uberon_v019=UBERON:0005795;2.47e-19;1!UBERON:0001764;2.47e-19;1!UBERON:0001825;2.47e-19;1!UBERON:0002046;1.45e-15;5!UBERON:0000341;2.37e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.08e-19,1;UBERON:0001825,1.08e-19,1;UBERON:0002046,1.21e-15,5;UBERON:0004117,1.21e-15,5;UBERON:0007689,1.21e-15,5;UBERON:0007123,1.21e-15,5;UBERON:0003091,1.21e-15,5;UBERON:0000341,2.72e-10,2;UBERON:0009722,1.28e-07,11;UBERON:0007690,1.28e-07,11;UBERON:0000949,8.92e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,1.53580351049616,0,0,0,0,0,0.19924798825107,0.276283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0.670869375198532,1.02447419488958,1.83591058472493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,1.88464915500281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0.91064876540519,0.532214220975833,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.4582137370881,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0.45178432815584,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.42838658878244,0.258355639344024,0.31037357147929,0,2.73682780596109,1.81905470062397,0.653150243690884,0.684466602170562,0.134704106029175,0.502055437748735,0.332660356546013,0.162806537221949,0,0,0,0,0,1.22068853494722,0,0.402547587182052,0|short_description=p10@LNX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=84708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6657 | |||
|TSSclassifier=S | |||
|UniProt=Q8TBB1 | |||
|association_with_transcript=-2bp_to_ENST00000263925_5end | |||
|description=CAGE_peak_10_at_LNX1_5end | |||
|id=chr4:54457785..54457795,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.45e-15;5!UBERON:0003918;3.62e-08;10!UBERON:0007687;3.62e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.47e-19;1!DOID:1357;2.47e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.08e-19,1;DOID:1357,1.08e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.26e-12!129;UBERON:0004185!2.26e-12!129;UBERON:0001007!1.36e-11!155;UBERON:0001555!1.36e-11!155;UBERON:0007026!1.36e-11!155;UBERON:0004119!1.49e-11!169;UBERON:0000925!1.49e-11!169;UBERON:0006595!1.49e-11!169;UBERON:0006562!1.52e-10!11;UBERON:0007023!5.87e-10!115;UBERON:0000065!1.57e-09!53;UBERON:0001004!4.94e-09!72;UBERON:0000077!7.16e-09!130;UBERON:0001041!8.07e-09!98;UBERON:0001042!1.42e-08!10;UBERON:0009145!1.42e-08!10;UBERON:0001723!1.49e-08!3;UBERON:0001033!1.49e-08!3;UBERON:0010056!1.49e-08!3;UBERON:0005178!3.10e-08!34;UBERON:0002224!3.10e-08!34;UBERON:0005181!6.34e-08!35;UBERON:0008814!7.75e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;2.47e-19;1!UBERON:0001764;2.47e-19;1!UBERON:0001825;2.47e-19;1!UBERON:0002046;1.45e-15;5!UBERON:0000341;2.37e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.08e-19,1;UBERON:0001825,1.08e-19,1;UBERON:0002046,1.21e-15,5;UBERON:0004117,1.21e-15,5;UBERON:0007689,1.21e-15,5;UBERON:0007123,1.21e-15,5;UBERON:0003091,1.21e-15,5;UBERON:0000341,2.72e-10,2;UBERON:0009722,1.28e-07,11;UBERON:0007690,1.28e-07,11;UBERON:0000949,8.92e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,1.53580351049616,0,0,0,0,0,0.19924798825107,0.276283915531148,0.503865495708552,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0,0.670869375198532,1.02447419488958,1.83591058472493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,1.88464915500281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0.91064876540519,0.532214220975833,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.4582137370881,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0.45178432815584,0,0.150962843566674,0.0771741581079447,0.218559560503957,0.940634592723046,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.42838658878244,0.258355639344024,0.31037357147929,0,2.73682780596109,1.81905470062397,0.653150243690884,0.684466602170562,0.134704106029175,0.502055437748735,0.332660356546013,0.162806537221949,0,0,0,0,0,1.22068853494722,0,0.402547587182052,0 | |||
|short_description=p10@LNX1 | |||
}} |
Revision as of 11:06, 13 September 2013
Short description: | p10@LNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_LNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000263925_5end |
EntrezGene: | LNX1 |
HGNC: | 6657 |
UniProt: | Q8TBB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.08e-19 | 1 |
paranasal sinus | 1.08e-19 | 1 |
thyroid gland | 1.21e-15 | 5 |
pharyngeal pouch | 1.21e-15 | 5 |
thyroid diverticulum | 1.21e-15 | 5 |
pharyngeal pouch 2 | 1.21e-15 | 5 |
thyroid primordium | 1.21e-15 | 5 |
throat | 2.72e-10 | 2 |
entire pharyngeal arch endoderm | 1.28e-07 | 11 |
early pharyngeal endoderm | 1.28e-07 | 11 |
endocrine system | 8.92e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.08e-19 | 1 |
maxillary sinus cancer | 1.08e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.