FFCP PHASE1:Hg19::chr4:120133791..120133802,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29255|TSSclassifier=S|UniProt=Q70EK8|association_with_transcript=0bp_to_ENST00000274030_5end|coexpression_cluster_id=C4365|description=CAGE_peak_3_at_USP53_5end|id=chr4:120133791..120133802,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;3.65e-08;13|ontology_enrichment_celltype_v019_2=CL:0000136,2.87e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.97e-09!115;UBERON:0000468!6.97e-08!659;UBERON:0000467!2.81e-07!625;UBERON:0000480!3.86e-07!626|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-07,114;UBERON:0000926,3.51e-07,315;UBERON:0004120,3.51e-07,315;UBERON:0006603,3.51e-07,315|phase1_expression=5.99538651592837,6.20891519283851,26.9222911823305,4.00293193412522,12.9618717383913,14.8297549097063,2.53299878168311,4.42203911398782,0.783556884599516,0.737201809504527,0.697801167972428,0,0,0.247532705920093,0,2.6893005858071,6.02694528023977,5.11217063271161,4.87932798790507,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0.393364276848904,0,0.154816123316076,0,0.90361775633475,0.739508020333575,2.32401601740905,0.284338464974843,0,0,0.200544447470142,0,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0.485168122375632,1.85943229524548,1.23350366406548,1.54853185447552,1.1507695692886,2.81776777182011,1.41889337933151,4.82643953031266,5.16387746867061,1.35426486594342,0.752969358170419,0.818718450173537,0.898893937780338,1.83650335422542,2.24650318953266,1.91801137739712,0,0.598390972864896,0.852449501065388,1.7412554317715,2.8369261234557,3.73693349397345,2.00998932205395,0.521482918420201,2.82345498116652,1.81619850790011,5.15588690382591,2.53169909952708,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0.526768169550154,0.196709770113833,0.786021525498329,0.616804496998528,0.668745981562712,1.30368906653436,1.4203434172042,1.94826728407911,0,0.883817722424512,0.221533894583621,1.08321545506006,0.384273959177026,0.390178042679635,0,0,0.579606171470105,0.444859689486181,0.535081656179426,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0.637130828648193,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0.144824403882799,2.43806866313962,0,0.639312809217652,0,0.50133791063589,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.351339142772504,1.17881167947941,0.364295288292542,0,0.97364218096405,0.348259474598534,0.664789802594326,0.476981248610684,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.419499436209906,4.12677062910101,1.46296476575767,1.29208379584664,1.77883131343355,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.625098097988558,1.79623498100936,1.46394924628319,0,0.949265659568129,1.09921046358244,0,0,0,2.98183171017191,2.40597972162702,51.1099437939025,3.72887606973458,1.06400514659507,3.36406560085384,0,0.24666754841716,4.35695449559673,1.88594940897563,0.817309515567294,0.302714855289863,0.576175924479999,1.64025002283658,0.624320153660641,1.1409436430889,5.38015249986484,2.46612447151906,0,0.280901613404497,2.65400422631361,0.368502951935304,0.723280468230358,1.18800285728205,0.741800787835671,6.37112953356618,6.46756327634615,0.841680569770331,0.500474079487857,6.37247465613621,0.877955241761676,0.919463387397059,1.65261864797256,1.47461838108027,2.15267562826634,0.85422955527427,5.29829752898905,1.20036438433761,1.44273540933814,1.28820270022815,1.8611685633159,0.506328996723799,0.68205903612839,5.55354303337052,3.03764665519588,4.52608959092673,5.32514388774922,3.62707553619505,1.3564847384839,2.12586938479627,1.36373060295417,1.14721838155602,0.975789649036763,0.795178609928912,0.813357600086629,0.829288440122964,0.756962552626885,1.09493207722749,0,0,0,11.6091982007995,10.1063127433742,0.354920400119532,0.168584690078102,0.482022059766964,0,0.217879444092406,0.474541238222193,0,0,0,0,0,2.4694440679884,2.94017422771084,1.26755034821831,0,0.590789906681404,0,0.737930631258681,0.514703430895577,0.98775256867763,1.1240175325762,1.20634766893957,0.370353780634118,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0.462985512576611,0,0,0,0,0.234004265139238,0,1.87467667973554,1.00789276919316,1.41775097242386,1.43293636324557,1.74380363108377,0,6.40462209264727,0.264145302039678,2.48793738648926,2.88239906833923,1.38866676769018,0,0,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0.87192013766656,0.5867062865676,1.55126058909333,0,2.535908257668,6.11657668145202,5.2003718455683,0,0,0.799266537048298,2.85955987316295,0.542621605391443,0,2.93162565864362,0.710783897485092,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29255 | |||
|TSSclassifier=S | |||
|UniProt=Q70EK8 | |||
|association_with_transcript=0bp_to_ENST00000274030_5end | |||
|coexpression_cluster_id=C4365 | |||
|description=CAGE_peak_3_at_USP53_5end | |||
|id=chr4:120133791..120133802,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.65e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.87e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.97e-09!115;UBERON:0000468!6.97e-08!659;UBERON:0000467!2.81e-07!625;UBERON:0000480!3.86e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-07,114;UBERON:0000926,3.51e-07,315;UBERON:0004120,3.51e-07,315;UBERON:0006603,3.51e-07,315 | |||
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| |||
|short_description=p3@USP53 | |||
}} |
Revision as of 02:14, 13 September 2013
Short description: | p3@USP53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_USP53_5end |
Coexpression cluster: | C4365_Fibroblast_basal_mesenchymal_Adipocyte_melanoma_Mesothelial_hepatic |
Association with transcript: | 0bp_to_ENST00000274030_5end |
EntrezGene: | USP53 |
HGNC: | 29255 |
UniProt: | Q70EK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-07 | 114 |
mesoderm | 3.51e-07 | 315 |
mesoderm-derived structure | 3.51e-07 | 315 |
presumptive mesoderm | 3.51e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.