FFCP PHASE1:Hg19::chr4:146436110..146436135,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=6767|TSSclassifier=N|UniProt=Q15797|association_with_transcript=344bp_to_AB463262,BT007386,CU674906,DQ892510,DQ895724_5end|description=CAGE_peak_6_at_SMAD1_5end|id=chr4:146436110..146436135,+|ontology_enrichment_celltype=CL:0002139!9.79e-07!24|ontology_enrichment_celltype_v019=CL:0002139;1.64e-07;24!CL:0000115;6.97e-07;36|ontology_enrichment_celltype_v019_2=CL:0000115,1.50e-07,36;CL:0002139,1.75e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.60e-13!659;UBERON:0001017!5.26e-10!82;UBERON:0000467!5.31e-10!625;UBERON:0000480!8.86e-10!626;UBERON:0005743!1.04e-09!86;UBERON:0001049!2.53e-09!57;UBERON:0005068!2.53e-09!57;UBERON:0006241!2.53e-09!57;UBERON:0007135!2.53e-09!57;UBERON:0004111!4.71e-09!241;UBERON:0000477!1.62e-08!286;UBERON:0000922!1.75e-08!612;UBERON:0003080!2.74e-08!42;UBERON:0000073!2.96e-08!94;UBERON:0001016!2.96e-08!94;UBERON:0000483!4.68e-08!309;UBERON:0002780!7.41e-08!41;UBERON:0001890!7.41e-08!41;UBERON:0006240!7.41e-08!41;UBERON:0000119!9.62e-08!312;UBERON:0002616!1.38e-07!59;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0002346!3.77e-07!90;UBERON:0000025!4.36e-07!194;UBERON:0000924!4.38e-07!173;UBERON:0006601!4.38e-07!173;UBERON:0002050!4.67e-07!605;UBERON:0005423!4.67e-07!605;UBERON:0002020!4.71e-07!34;UBERON:0003528!4.71e-07!34;UBERON:0003056!5.85e-07!61;UBERON:0000475!6.02e-07!365;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0002791!9.56e-07!33;UBERON:0003075!1.00e-06!86;UBERON:0007284!1.00e-06!86|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.59e-08,240;UBERON:0003528,6.33e-07,34;UBERON:0002020,6.33e-07,34;UBERON:0002791,8.05e-07,32|phase1_expression=0.181678379270557,1.92690471501885,0.563817616383885,0,0.893922188854576,0,5.06599756336621,0,0,0.737201809504527,0,0.436882744260345,0,0.247532705920093,0.331397375727916,4.03395087871065,3.01347264011988,2.92124036154949,2.92759679274304,0.246242116153576,0.408001382488506,0.940364164434263,1.14494394852423,2.6006140763848,1.50651167513763,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0.422510572623884,0.850417199860174,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,1.19350006319454,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.12786256184353,0.361439152384566,1.00267582127178,1.01392563272577,0,0.486634870302636,0.567208902984407,0.886917589850256,0.351339142772504,0.982343066232845,0.728590576585084,0.370784442784429,0.649094787309367,0.348259474598534,1.19662164466979,0,0,0,0.79504962946682,0.860234595106124,2.08284300964557,0,0,3.30141650328081,0.835979866147242,1.29208379584664,2.84613010149368,3.68192674041137,8.86224497640123,0.760272105718513,11.470916704764,2.20597848207521,4.0507097394088,2.14319347881791,1.34717623575702,0.675668882899933,0,0.949265659568129,1.09921046358244,0,0,0,0.993943903390637,1.13967460498122,0.397227542439656,1.72101972449288,1.41867352879343,0.560677600142307,0,0,0.311211035399766,0.942974704487816,0.817309515567294,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0.298897361103602,1.29177948508141,0.161872944368132,0.561803226808994,0.204154171254893,0.491337269247072,0.206651562351531,0,0.494533858557114,0,0,0,1.12606667884768,0,0.438977620880838,0.919463387397059,0.150238058906597,0.113432183160021,1.4351170855109,2.13557388818567,1.05965950579781,0.900273288253207,0.92747276314595,1.8034837803194,1.30281799432113,0.675105328965065,1.07180705677318,0.757301322732344,0.644349290496095,0.80823028409406,0.355009592516614,0.604512589365842,0.169560592310488,0.57978255948989,0.272746120590835,0,1.09776335516636,1.32529768321485,0.69716365721711,1.24393266018445,1.00928340350251,0.72995471815166,0,0,0,0.464367928031979,0,0.354920400119532,0.842923450390509,0.482022059766964,0.661763836394364,0.435758888184812,1.42362371466658,0.134831308160164,0.588664395376038,0.38474715694639,2.21446636387394,0,0.4115740113314,0,2.53510069643662,3.9313088667105,0.590789906681404,0.882926198829301,0.737930631258681,0,0.658501712451753,0,0.603173834469785,1.48141512253647,0.651616610620649,0,1.44331342025273,1.04337364477569,0.352226082707465,1.73239737313289,1.38895653772983,3.04406643575357,0.790204397959275,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.626909658919938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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6767 | |||
|TSSclassifier=N | |||
|UniProt=Q15797 | |||
|association_with_transcript=344bp_to_AB463262,BT007386,CU674906,DQ892510,DQ895724_5end | |||
|description=CAGE_peak_6_at_SMAD1_5end | |||
|id=chr4:146436110..146436135,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.79e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.64e-07;24!CL:0000115;6.97e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.50e-07,36;CL:0002139,1.75e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.60e-13!659;UBERON:0001017!5.26e-10!82;UBERON:0000467!5.31e-10!625;UBERON:0000480!8.86e-10!626;UBERON:0005743!1.04e-09!86;UBERON:0001049!2.53e-09!57;UBERON:0005068!2.53e-09!57;UBERON:0006241!2.53e-09!57;UBERON:0007135!2.53e-09!57;UBERON:0004111!4.71e-09!241;UBERON:0000477!1.62e-08!286;UBERON:0000922!1.75e-08!612;UBERON:0003080!2.74e-08!42;UBERON:0000073!2.96e-08!94;UBERON:0001016!2.96e-08!94;UBERON:0000483!4.68e-08!309;UBERON:0002780!7.41e-08!41;UBERON:0001890!7.41e-08!41;UBERON:0006240!7.41e-08!41;UBERON:0000119!9.62e-08!312;UBERON:0002616!1.38e-07!59;UBERON:0000955!1.57e-07!69;UBERON:0006238!1.57e-07!69;UBERON:0002346!3.77e-07!90;UBERON:0000025!4.36e-07!194;UBERON:0000924!4.38e-07!173;UBERON:0006601!4.38e-07!173;UBERON:0002050!4.67e-07!605;UBERON:0005423!4.67e-07!605;UBERON:0002020!4.71e-07!34;UBERON:0003528!4.71e-07!34;UBERON:0003056!5.85e-07!61;UBERON:0000475!6.02e-07!365;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0002791!9.56e-07!33;UBERON:0003075!1.00e-06!86;UBERON:0007284!1.00e-06!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.59e-08,240;UBERON:0003528,6.33e-07,34;UBERON:0002020,6.33e-07,34;UBERON:0002791,8.05e-07,32 | |||
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| |||
|short_description=p6@SMAD1 | |||
}} |
Revision as of 02:39, 13 September 2013
Short description: | p6@SMAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SMAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 344bp_to_AB463262, BT007386, CU674906, DQ892510, DQ895724_5end |
EntrezGene: | SMAD1 |
HGNC: | 6767 |
UniProt: | Q15797 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.50e-07 | 36 |
endothelial cell of vascular tree | 1.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.59e-08 | 240 |
brain grey matter | 6.33e-07 | 34 |
gray matter | 6.33e-07 | 34 |
regional part of telencephalon | 8.05e-07 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.