FFCP PHASE1:Hg19::chr4:175412454..175412469,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2786|description=CAGE_peak_at_chr4:175412454..175412469,-|id=chr4:175412454..175412469,-|ontology_enrichment_celltype=CL:0002541!2.82e-11!3;CL:0002274!4.93e-11!5;CL:0000457!4.93e-11!5;CL:0002191!4.93e-11!5;CL:0000097!4.93e-11!5;CL:0000831!4.93e-11!5;CL:0002028!4.93e-11!5|ontology_enrichment_celltype_v019=CL:0002541;3.76e-66;3!CL:0000349;4.07e-11;19!CL:0000182;2.65e-08;12|ontology_enrichment_celltype_v019_2=CL:0002541,1.92e-66,3;CL:0000349,3.67e-11,19;CL:0000182,2.65e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8552;1.67e-23;1|ontology_enrichment_disease_v019_2=DOID:8552,1.67e-23,1|ontology_enrichment_uberon=UBERON:0000476!2.82e-11!3;UBERON:0000920!2.82e-11!3;UBERON:0003124!5.26e-08!7|ontology_enrichment_uberon_v019=UBERON:0003124;3.76e-66;3!UBERON:0000920;3.76e-66;3!UBERON:0005631;1.79e-20;10!UBERON:0000158;1.79e-20;10!UBERON:0000478;6.22e-09;24!UBERON:0002114;1.30e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.92e-66,3;UBERON:0003124,5.13e-29,7;UBERON:0005631,6.68e-15,14;UBERON:0000158,6.68e-15,14;UBERON:0000478,5.73e-09,24;UBERON:0002114,1.51e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28290604079356,0.414656231081544,0.864719720501769,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0.33307196799782,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,1.5950057986596,1.37396390102793,9.06159119231679,0,0,4.65392709320438,0,0,0,0,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.977756913674015,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0.82092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.23248285073625,0,0,0,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr4:175412454..175412469,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2786 | |||
|description=CAGE_peak_at_chr4:175412454..175412469,- | |||
|id=chr4:175412454..175412469,- | |||
|ontology_enrichment_celltype=CL:0002541!2.82e-11!3;CL:0002274!4.93e-11!5;CL:0000457!4.93e-11!5;CL:0002191!4.93e-11!5;CL:0000097!4.93e-11!5;CL:0000831!4.93e-11!5;CL:0002028!4.93e-11!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.76e-66;3!CL:0000349;4.07e-11;19!CL:0000182;2.65e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.92e-66,3;CL:0000349,3.67e-11,19;CL:0000182,2.65e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;1.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,1.67e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.82e-11!3;UBERON:0000920!2.82e-11!3;UBERON:0003124!5.26e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.76e-66;3!UBERON:0000920;3.76e-66;3!UBERON:0005631;1.79e-20;10!UBERON:0000158;1.79e-20;10!UBERON:0000478;6.22e-09;24!UBERON:0002114;1.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.92e-66,3;UBERON:0003124,5.13e-29,7;UBERON:0005631,6.68e-15,14;UBERON:0000158,6.68e-15,14;UBERON:0000478,5.73e-09,24;UBERON:0002114,1.51e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,2.94848165003288,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28290604079356,0.414656231081544,0.864719720501769,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0.33307196799782,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,1.5950057986596,1.37396390102793,9.06159119231679,0,0,4.65392709320438,0,0,0,0,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.977756913674015,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0.82092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0.444925607568277,0.078493092850514,0,0,0,0,0.47775168788705,0.0714765441766563,0,0.23248285073625,0,0,0,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr4:175412454..175412469,- | |||
}} |
Revision as of 03:25, 13 September 2013
Short description: | p@chr4:175412454..175412469, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:175412454..175412469, - |
Coexpression cluster: | C2786_chorionic_Mast_chronic_acute_Hepatocyte_duodenum_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.92e-66 | 3 |
extraembryonic cell | 3.67e-11 | 19 |
hepatocyte | 2.65e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.92e-66 | 3 |
chorion | 5.13e-29 | 7 |
extraembryonic membrane | 6.68e-15 | 14 |
membranous layer | 6.68e-15 | 14 |
extraembryonic structure | 5.73e-09 | 24 |
duodenum | 1.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.67e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.