FFCP PHASE1:Hg19::chr4:186732918..186732921,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=C9JM25,C9JI79|association_with_transcript=-7bp_to_ENST00000428330,ENST00000429056_5end|description=CAGE_peak_28_at_SORBS2_5end|id=chr4:186732918..186732921,-|ontology_enrichment_celltype=CL:0000223!2.68e-08!59|ontology_enrichment_celltype_v019=CL:0000167;2.49e-07;1!CL:0000164;2.49e-07;1!CL:0000502;2.49e-07;1!CL:0000172;2.49e-07;1!CL:0000173;2.49e-07;1|ontology_enrichment_celltype_v019_2=CL:0000167,3.20e-07,1;CL:0000164,3.20e-07,1;CL:0000502,3.20e-07,1;CL:0000172,3.20e-07,1;CL:0000173,3.20e-07,1;CL:0002351,3.20e-07,1|ontology_enrichment_development_v019=UBERON:0006298;6.79e-08;1!UBERON:0008801;1.00e-07;1!UBERON:0005754;1.00e-07;1!CL:0002351;2.49e-07;1!UBERON:0006242;2.49e-07;1!UBERON:0004140;2.49e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.00e-07;1!DOID:1357;1.00e-07;1!DOID:4960;2.49e-07;1!DOID:0070004;2.49e-07;1!DOID:4430;2.49e-07;1!DOID:5409;6.44e-07;4|ontology_enrichment_disease_v019_2=DOID:0050619,1.03e-07,1;DOID:1357,1.03e-07,1;DOID:4960,2.83e-07,1;DOID:0070004,2.83e-07,1;DOID:4430,3.20e-07,1;DOID:5409,5.89e-07,4|ontology_enrichment_uberon=UBERON:0007023!6.93e-26!115;UBERON:0004921!2.98e-15!129;UBERON:0004185!2.98e-15!129;UBERON:0000481!6.23e-14!347;UBERON:0004119!8.19e-14!169;UBERON:0000925!8.19e-14!169;UBERON:0006595!8.19e-14!169;UBERON:0001007!8.99e-14!155;UBERON:0001555!8.99e-14!155;UBERON:0007026!8.99e-14!155;UBERON:0000077!3.93e-11!130;UBERON:0000466!4.46e-11!126;UBERON:0002530!1.70e-10!59;UBERON:0001041!5.24e-10!98;UBERON:0000062!7.08e-10!511;UBERON:0001044!2.18e-09!6;UBERON:0003293!2.18e-09!6;UBERON:0003294!2.18e-09!6;UBERON:0010047!2.18e-09!6;UBERON:0000167!2.18e-09!6;UBERON:0005177!5.32e-09!107;UBERON:0003408!1.31e-08!10;UBERON:0000464!1.63e-08!104;UBERON:0000477!3.10e-08!286;UBERON:0004111!1.26e-07!241;UBERON:0000153!4.00e-07!129;UBERON:0007811!4.00e-07!129;UBERON:0002553!4.49e-07!70;UBERON:0005911!4.56e-07!82;UBERON:0003103!5.34e-07!69;UBERON:0000475!5.83e-07!365;UBERON:0005172!7.40e-07!55;UBERON:0005173!7.40e-07!55;UBERON:0000489!9.60e-07!32|ontology_enrichment_uberon_v019=UBERON:0001044;3.44e-17;6!UBERON:0003293;3.44e-17;6!UBERON:0003294;3.44e-17;6!UBERON:0010047;3.44e-17;6!UBERON:0003408;3.44e-17;6!UBERON:0000167;3.44e-17;6!UBERON:0001829;6.23e-14;2!UBERON:0000007;1.76e-13;2!UBERON:0000341;5.51e-13;2!UBERON:0001041;4.72e-11;14!UBERON:0002365;5.05e-09;31!UBERON:0002330;5.05e-09;31!UBERON:0002530;6.28e-09;57!UBERON:0001736;6.79e-08;1!UBERON:0001831;1.00e-07;1!UBERON:0000998;1.00e-07;1!UBERON:0001764;1.00e-07;1!UBERON:0006868;1.00e-07;1!UBERON:0001825;1.00e-07;1!UBERON:0001567;1.00e-07;1!UBERON:0002146;2.49e-07;1!UBERON:0005623;2.49e-07;1!UBERON:0003296;3.67e-07;4!UBERON:0010133;3.67e-07;4!UBERON:0002368;6.06e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.76e-17,6;UBERON:0003293,2.76e-17,6;UBERON:0003294,2.76e-17,6;UBERON:0010047,2.76e-17,6;UBERON:0000167,2.76e-17,6;UBERON:0002530,4.96e-15,59;UBERON:0001829,5.17e-14,2;UBERON:0000007,8.58e-14,2;UBERON:0000341,6.64e-13,2;UBERON:0003408,2.02e-10,10;UBERON:0002365,6.77e-09,31;UBERON:0002330,6.77e-09,31;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0001736,6.59e-08,1;UBERON:0006298,6.59e-08,1;UBERON:0001041,7.42e-08,87;UBERON:0001831,8.54e-08,1;UBERON:0001567,8.54e-08,1;UBERON:0008801,8.54e-08,1;UBERON:0000998,9.71e-08,1;UBERON:0006868,9.71e-08,1;UBERON:0001764,1.03e-07,1;UBERON:0001825,1.03e-07,1;UBERON:0007023,1.04e-07,114;UBERON:0002368,1.12e-07,35;UBERON:0000949,1.48e-07,45;UBERON:0004119,2.01e-07,160;UBERON:0000925,2.01e-07,160;UBERON:0006595,2.01e-07,160;UBERON:0003296,2.58e-07,4;UBERON:0010133,2.58e-07,4;UBERON:0004921,2.91e-07,118;UBERON:0002146,3.40e-07,1;UBERON:0005623,3.40e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.614942192715568,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.276242966807689,0,0,0,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.515205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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt=C9JM25,C9JI79 | |||
|association_with_transcript=-7bp_to_ENST00000428330,ENST00000429056_5end | |||
|description=CAGE_peak_28_at_SORBS2_5end | |||
|id=chr4:186732918..186732921,- | |||
|ontology_enrichment_celltype=CL:0000223!2.68e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.49e-07;1!CL:0000164;2.49e-07;1!CL:0000502;2.49e-07;1!CL:0000172;2.49e-07;1!CL:0000173;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.20e-07,1;CL:0000164,3.20e-07,1;CL:0000502,3.20e-07,1;CL:0000172,3.20e-07,1;CL:0000173,3.20e-07,1;CL:0002351,3.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.79e-08;1!UBERON:0008801;1.00e-07;1!UBERON:0005754;1.00e-07;1!CL:0002351;2.49e-07;1!UBERON:0006242;2.49e-07;1!UBERON:0004140;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.00e-07;1!DOID:1357;1.00e-07;1!DOID:4960;2.49e-07;1!DOID:0070004;2.49e-07;1!DOID:4430;2.49e-07;1!DOID:5409;6.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.03e-07,1;DOID:1357,1.03e-07,1;DOID:4960,2.83e-07,1;DOID:0070004,2.83e-07,1;DOID:4430,3.20e-07,1;DOID:5409,5.89e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.93e-26!115;UBERON:0004921!2.98e-15!129;UBERON:0004185!2.98e-15!129;UBERON:0000481!6.23e-14!347;UBERON:0004119!8.19e-14!169;UBERON:0000925!8.19e-14!169;UBERON:0006595!8.19e-14!169;UBERON:0001007!8.99e-14!155;UBERON:0001555!8.99e-14!155;UBERON:0007026!8.99e-14!155;UBERON:0000077!3.93e-11!130;UBERON:0000466!4.46e-11!126;UBERON:0002530!1.70e-10!59;UBERON:0001041!5.24e-10!98;UBERON:0000062!7.08e-10!511;UBERON:0001044!2.18e-09!6;UBERON:0003293!2.18e-09!6;UBERON:0003294!2.18e-09!6;UBERON:0010047!2.18e-09!6;UBERON:0000167!2.18e-09!6;UBERON:0005177!5.32e-09!107;UBERON:0003408!1.31e-08!10;UBERON:0000464!1.63e-08!104;UBERON:0000477!3.10e-08!286;UBERON:0004111!1.26e-07!241;UBERON:0000153!4.00e-07!129;UBERON:0007811!4.00e-07!129;UBERON:0002553!4.49e-07!70;UBERON:0005911!4.56e-07!82;UBERON:0003103!5.34e-07!69;UBERON:0000475!5.83e-07!365;UBERON:0005172!7.40e-07!55;UBERON:0005173!7.40e-07!55;UBERON:0000489!9.60e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.44e-17;6!UBERON:0003293;3.44e-17;6!UBERON:0003294;3.44e-17;6!UBERON:0010047;3.44e-17;6!UBERON:0003408;3.44e-17;6!UBERON:0000167;3.44e-17;6!UBERON:0001829;6.23e-14;2!UBERON:0000007;1.76e-13;2!UBERON:0000341;5.51e-13;2!UBERON:0001041;4.72e-11;14!UBERON:0002365;5.05e-09;31!UBERON:0002330;5.05e-09;31!UBERON:0002530;6.28e-09;57!UBERON:0001736;6.79e-08;1!UBERON:0001831;1.00e-07;1!UBERON:0000998;1.00e-07;1!UBERON:0001764;1.00e-07;1!UBERON:0006868;1.00e-07;1!UBERON:0001825;1.00e-07;1!UBERON:0001567;1.00e-07;1!UBERON:0002146;2.49e-07;1!UBERON:0005623;2.49e-07;1!UBERON:0003296;3.67e-07;4!UBERON:0010133;3.67e-07;4!UBERON:0002368;6.06e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.76e-17,6;UBERON:0003293,2.76e-17,6;UBERON:0003294,2.76e-17,6;UBERON:0010047,2.76e-17,6;UBERON:0000167,2.76e-17,6;UBERON:0002530,4.96e-15,59;UBERON:0001829,5.17e-14,2;UBERON:0000007,8.58e-14,2;UBERON:0000341,6.64e-13,2;UBERON:0003408,2.02e-10,10;UBERON:0002365,6.77e-09,31;UBERON:0002330,6.77e-09,31;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0001736,6.59e-08,1;UBERON:0006298,6.59e-08,1;UBERON:0001041,7.42e-08,87;UBERON:0001831,8.54e-08,1;UBERON:0001567,8.54e-08,1;UBERON:0008801,8.54e-08,1;UBERON:0000998,9.71e-08,1;UBERON:0006868,9.71e-08,1;UBERON:0001764,1.03e-07,1;UBERON:0001825,1.03e-07,1;UBERON:0007023,1.04e-07,114;UBERON:0002368,1.12e-07,35;UBERON:0000949,1.48e-07,45;UBERON:0004119,2.01e-07,160;UBERON:0000925,2.01e-07,160;UBERON:0006595,2.01e-07,160;UBERON:0003296,2.58e-07,4;UBERON:0010133,2.58e-07,4;UBERON:0004921,2.91e-07,118;UBERON:0002146,3.40e-07,1;UBERON:0005623,3.40e-07,1 | |||
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|short_description=p28@SORBS2 | |||
}} |
Revision as of 10:21, 13 September 2013
Short description: | p28@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_SORBS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000428330, ENST00000429056_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9JM25C9JI79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.20e-07 | 1 |
enteroendocrine cell | 3.20e-07 | 1 |
type D enteroendocrine cell | 3.20e-07 | 1 |
somatostatin secreting cell | 3.20e-07 | 1 |
pancreatic D cell | 3.20e-07 | 1 |
progenitor cell of endocrine pancreas | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.76e-17 | 6 |
gland of oral region | 2.76e-17 | 6 |
gland of foregut | 2.76e-17 | 6 |
oral gland | 2.76e-17 | 6 |
oral cavity | 2.76e-17 | 6 |
gland | 4.96e-15 | 59 |
major salivary gland | 5.17e-14 | 2 |
pituitary gland | 8.58e-14 | 2 |
throat | 6.64e-13 | 2 |
gland of gut | 2.02e-10 | 10 |
exocrine gland | 6.77e-09 | 31 |
exocrine system | 6.77e-09 | 31 |
digestive system | 1.56e-08 | 145 |
digestive tract | 1.56e-08 | 145 |
primitive gut | 1.56e-08 | 145 |
submandibular gland | 6.59e-08 | 1 |
submandibular gland primordium | 6.59e-08 | 1 |
foregut | 7.42e-08 | 87 |
parotid gland | 8.54e-08 | 1 |
cheek | 8.54e-08 | 1 |
parotid gland primordium | 8.54e-08 | 1 |
seminal vesicle | 9.71e-08 | 1 |
seminal fluid secreting gland | 9.71e-08 | 1 |
maxillary sinus | 1.03e-07 | 1 |
paranasal sinus | 1.03e-07 | 1 |
adult organism | 1.04e-07 | 114 |
endocrine gland | 1.12e-07 | 35 |
endocrine system | 1.48e-07 | 45 |
endoderm-derived structure | 2.01e-07 | 160 |
endoderm | 2.01e-07 | 160 |
presumptive endoderm | 2.01e-07 | 160 |
gland of diencephalon | 2.58e-07 | 4 |
neuroendocrine gland | 2.58e-07 | 4 |
subdivision of digestive tract | 2.91e-07 | 118 |
pulmonary valve | 3.40e-07 | 1 |
semi-lunar valve | 3.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.03e-07 | 1 |
maxillary sinus cancer | 1.03e-07 | 1 |
bone marrow cancer | 2.83e-07 | 1 |
myeloma | 2.83e-07 | 1 |
somatostatinoma | 3.20e-07 | 1 |
lung small cell carcinoma | 5.89e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.