FFCP PHASE1:Hg19::chr6:33048503..33048537,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3113|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4938|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000476642_5end|description=CAGE_peak_2_at_HLA-DPA1_5end|id=chr6:33048503..33048537,-|ontology_enrichment_celltype=CL:0000055!7.85e-10!180;CL:0000057!5.33e-09!75;CL:0000115!3.60e-08!35;CL:0002078!4.33e-07!44|ontology_enrichment_celltype_v019=CL:0000115;6.33e-07;36|ontology_enrichment_celltype_v019_2=CL:0000115,6.41e-08,36;CL:0002078,3.44e-07,45;CL:0000057,3.47e-07,76;CL:0002139,8.19e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!2.81e-12!113;UBERON:0004535!2.80e-11!110;UBERON:0007023!3.51e-10!115;UBERON:0004872!1.69e-09!84;UBERON:0000468!3.60e-09!659;UBERON:0002049!1.72e-08!79;UBERON:0007798!1.72e-08!79;UBERON:0003103!9.13e-08!69;UBERON:0000055!1.28e-07!69;UBERON:0000467!1.71e-07!625;UBERON:0003914!2.06e-07!118;UBERON:0000480!2.40e-07!626|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001009,2.46e-10,112;UBERON:0004535,2.91e-09,109;UBERON:0003103,1.25e-08,68;UBERON:0004872,6.74e-08,83;UBERON:0002049,3.10e-07,78;UBERON:0007798,3.10e-07,78|phase1_expression=0.54503513781167,10.0627246228762,0.140954404095971,8.00586386825043,0.446961094427288,0.872338524100369,2.53299878168311,1.89515962028049,0.522371256399677,0.245733936501509,0.697801167972428,3.05817920982241,1.31883489114227,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0,0.61560529038394,0.204000691244253,0,0.286235987131057,0.684372125364421,0,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,1.50602959389125,0,0,0,2.05520307534393,0,0.200544447470142,0,2.01523926815932,0.971680998056939,1.03030227053675,0,0.377875943688809,0,0,0,0,0.28769239232215,1.2808035326455,0,0.344745680736619,1.93645405075148,0,0,1.09162460023138,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,1.13477044938228,0,0,0,0.434377689410233,0,0.368277635987565,0.632924774881769,0,0,0,0.898629049171961,0.600707571366025,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.2786256184353,3.97583067623023,7.01873074890245,13.9052658202391,9.54343136461319,1.94653948121054,1.51255707462509,0.443458794925128,0.43917392846563,3.79839318943367,2.18577172975525,0,0.649094787309367,0.348259474598534,1.46253756570752,0.238490624305342,0,0,0,4.30117297553062,2.42998351125316,0.56530794192401,0.838998872419812,1.92582629358047,0,2.84258435086262,2.13459757612026,1.33888245105868,10.0707329277287,2.28081631715554,4.63717909341522,5.8826092855339,1.62028389576352,3.66128885964727,2.2452937262617,0.450445921933289,0,1.89853131913626,1.09921046358244,0,0,0,0,0,0.529636723252875,0,0.709336764396714,1.12135520028461,2.1349799145941,1.2333377420858,0.311211035399766,0.67355336034844,1.47115712802113,7.26515652695671,4.60940739583999,0.937285727335186,0.312160076830321,1.1409436430889,3.13842229158782,0,2.26622122115384,1.26405726032024,0.408308342509787,1.71968044236475,1.96318984233954,1.18800285728205,2.22540236350701,9.10161361938026,2.15585442544872,0,0.875829639103749,2.21651292387346,0.877955241761676,2.45190236639216,1.05166641234618,0.907457465280168,1.25572744982203,1.2813443329114,2.7551147150743,0.600182192168805,1.33968288009971,1.54584324027377,0.930584281657949,1.18143432568886,1.07180705677318,0,0,3.55621325001386,1.42003837006646,1.71278566986988,5.08681776931463,2.12586938479627,0,0,0.853815942907168,1.45782745153634,1.16193942869518,0.414644220061482,0.756962552626885,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,2.80483547606892,3.7041661019826,2.94017422771084,0,0,4.13552934676983,0,0,3.60292401626904,0,0,0,0,0.325808305310325,1.03993478527958,2.88662684050547,0,1.76113041353732,12.5598809552134,19.9083770407943,16.55211124441,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,1.16253575405585,0,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0,0,8.20522130470329,6.84289784090821,0.822619941626588,1.20137223137567,2.85826432630578,2.80327710863402,0,3.2268845761218,0.258543431515556,3.57656445851882,5.071816515336,1.86156681609409,1.04007436911366,3.60090323966999,0,2.66422179016099,0.714889968290738,1.62786481617433,3.29296134712308,4.88604276440603,0,0.791951872933429,0.301439377059586,0,0.799783929456456,0,0,0,0,0,0,0.434343920002738,1.2328579353023,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0.828831026872071,0.36807447515742,0,0,3.32753378449291,1.07057393278297,3.46945313074656,0.35142424497814,0.902838299183157,2.27407504055985,0,0.664225598535437,0.368738337083406,0.868836144680828,2.34961388955289,1.37257369524342,0.41353605224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04648003642567,2.02117188958219,2.39488422686657,3.08009970976753,2.22261774948139,3.37094365345579,2.99394320891412,0,0,1.9307228228694,0,0,4.27845054640033,0,7.32332451604064,2.81783311027437,0|short_description=p2@HLA-DPA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3113 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000476642_5end | |||
|description=CAGE_peak_2_at_HLA-DPA1_5end | |||
|id=chr6:33048503..33048537,- | |||
|ontology_enrichment_celltype=CL:0000055!7.85e-10!180;CL:0000057!5.33e-09!75;CL:0000115!3.60e-08!35;CL:0002078!4.33e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.33e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.41e-08,36;CL:0002078,3.44e-07,45;CL:0000057,3.47e-07,76;CL:0002139,8.19e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.81e-12!113;UBERON:0004535!2.80e-11!110;UBERON:0007023!3.51e-10!115;UBERON:0004872!1.69e-09!84;UBERON:0000468!3.60e-09!659;UBERON:0002049!1.72e-08!79;UBERON:0007798!1.72e-08!79;UBERON:0003103!9.13e-08!69;UBERON:0000055!1.28e-07!69;UBERON:0000467!1.71e-07!625;UBERON:0003914!2.06e-07!118;UBERON:0000480!2.40e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,2.46e-10,112;UBERON:0004535,2.91e-09,109;UBERON:0003103,1.25e-08,68;UBERON:0004872,6.74e-08,83;UBERON:0002049,3.10e-07,78;UBERON:0007798,3.10e-07,78 | |||
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| |||
|short_description=p2@HLA-DPA1 | |||
}} |
Revision as of 20:29, 13 September 2013
Short description: | p2@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HLA-DPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000476642_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.41e-08 | 36 |
meso-epithelial cell | 3.44e-07 | 45 |
fibroblast | 3.47e-07 | 76 |
endothelial cell of vascular tree | 8.19e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 2.46e-10 | 112 |
cardiovascular system | 2.91e-09 | 109 |
compound organ | 1.25e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 6.74e-08 | 83 |
vasculature | 3.10e-07 | 78 |
vascular system | 3.10e-07 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.