FFCP PHASE1:Hg19::chr6:42531976..42531987,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21289|TSSclassifier=W|UniProt=Q8IWV8|association_with_transcript=-70bp_to_uc003osf.2,uc011dur.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_5_at_UBR2_5end|id=chr6:42531976..42531987,+|ontology_enrichment_celltype=CL:0000738!3.52e-12!140;CL:0000542!4.06e-12!53;CL:0000051!4.06e-12!53;CL:0000838!7.22e-12!52;CL:0000988!1.23e-10!182;CL:0000037!1.55e-10!172;CL:0000566!1.55e-10!172;CL:0002032!9.83e-09!165;CL:0000837!9.83e-09!165;CL:0002087!2.45e-08!119;CL:0002031!3.42e-08!124|ontology_enrichment_celltype_v019=CL:0000081;8.79e-10;11!CL:0000542;5.83e-08;53!CL:0000084;1.30e-07;25!CL:0000094;2.45e-07;8|ontology_enrichment_celltype_v019_2=CL:0000542,2.97e-13,53;CL:0000051,2.97e-13,53;CL:0000838,7.47e-13,52;CL:0000738,6.51e-12,136;CL:0000988,2.45e-10,177;CL:0000037,1.20e-09,168;CL:0000081,1.98e-09,11;CL:0002087,2.23e-08,115;CL:0000084,6.97e-08,25;CL:0000827,6.97e-08,25;CL:0002032,1.62e-07,161;CL:0000837,1.62e-07,161;CL:0002031,1.70e-07,120;CL:0000094,3.53e-07,8|ontology_enrichment_development_v019=CL:0000051;5.83e-08;53|ontology_enrichment_disease=DOID:305!8.96e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!7.12e-09!15;UBERON:0000179!7.12e-09!15;UBERON:0000463!7.12e-09!15|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-13;15!UBERON:0000179;1.34e-13;15!UBERON:0000463;1.34e-13;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.07e-13,15;UBERON:0000179,1.07e-13,15;UBERON:0000463,1.07e-13,15|phase1_expression=0.54503513781167,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.547497700291537,0,0.152826811495903,0.57470412614962,0.157421562627358,0.393364276848904,1.53531759238885,1.08371286321253,2.75826367343678,0,0,1.85921281392724,2.13253848731132,0.587200878669695,0,0.200544447470142,0.651032612147555,0.223915474239924,0.32389366601898,0.515151135268373,2.4717700592526,1.51150377475524,2.18325655069035,1.62700325833979,0.411167888021826,2.16794459626573,0.575384784644301,0,0.236482229888585,0.689491361473237,1.29096936716765,0,1.12945403725563,0.818718450173537,0.449446968890169,0,0.320929027076094,1.27867425159808,1.9791078011203,1.39624560335142,0.852449501065388,1.7412554317715,0,0,0.75374599577023,0,0.868755378820466,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.600707571366025,0.64290234678832,0.855038231223746,1.59133341759272,0.730656615058536,3.51992488922645,1.63841583378639,2.66852776159066,1.28019066769952,0.800791974072025,0.574752439954483,1.98313461835459,1.90810750907073,1.1384259382189,0.587237189370939,1.14681968437569,3.96513985737078,1.68152568894461,0.526768169550154,2.16380747125216,0.393010762749165,2.05601498999509,0.668745981562712,0.651844533267181,1.4203434172042,3.89653456815823,0.668462741311041,2.06224135232386,1.10766947291811,2.97884250141517,0.512365278902701,0.910415432919148,0.657751618414705,1.38175008892924,0.869409257205157,0.593146252648242,0.535081656179426,1.04535523804977,1.47302145506836,0.766440987203842,2.06176467289578,1.77113784413652,1.59282707162048,1.30216690771284,0,0.752875595388864,1.4078527226986,0,1.18388626022008,3.28451198768419,2.21767417547206,2.94184215361858,1.88271725047639,0,0.670700859703636,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0,0.392937226493138,0.364295288292542,0,0.649094787309367,0.174129737299267,0.132957960518865,7.87019060207628,20.0198218773045,12.6295550452052,0,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,0,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,14.495845917967,23.2668158488995,0,0.496971951695318,0.506522046658319,3.97227542439656,0.860509862246441,0,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0.653847612453835,0,0,0,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.413303124703062,0,0.494533858557114,0,0,0.841680569770331,0.625592599359821,1.38532057742091,1.75591048352335,0,0.150238058906597,0.113432183160021,0.89694817844431,0,0.423863802319124,0.300091096084402,0.515262646192195,0.515281080091258,0.558350568994769,0.168776332241266,0.389748020644795,1.26216887122057,0.920498986422993,1.13152239773168,0.355009592516614,0.10075209822764,0.508681776931463,2.70565194428616,1.90922284413584,3.72845974005705,0.121973706129595,0.662648841607426,0.464775771478074,0.518305275076852,0.504641701751257,0,0,1.28648187638577,0,0.464367928031979,0,0.591534000199219,1.51726221070292,0.964044119533928,1.10293972732394,0.217879444092406,0.474541238222193,0.943819157121151,1.17732879075208,1.15424147083917,0,0,0,0,1.26755034821831,0,0.5907899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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21289 | |||
|TSSclassifier=W | |||
|UniProt=Q8IWV8 | |||
|association_with_transcript=-70bp_to_uc003osf.2,uc011dur.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_UBR2_5end | |||
|id=chr6:42531976..42531987,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.52e-12!140;CL:0000542!4.06e-12!53;CL:0000051!4.06e-12!53;CL:0000838!7.22e-12!52;CL:0000988!1.23e-10!182;CL:0000037!1.55e-10!172;CL:0000566!1.55e-10!172;CL:0002032!9.83e-09!165;CL:0000837!9.83e-09!165;CL:0002087!2.45e-08!119;CL:0002031!3.42e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000081;8.79e-10;11!CL:0000542;5.83e-08;53!CL:0000084;1.30e-07;25!CL:0000094;2.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.97e-13,53;CL:0000051,2.97e-13,53;CL:0000838,7.47e-13,52;CL:0000738,6.51e-12,136;CL:0000988,2.45e-10,177;CL:0000037,1.20e-09,168;CL:0000081,1.98e-09,11;CL:0002087,2.23e-08,115;CL:0000084,6.97e-08,25;CL:0000827,6.97e-08,25;CL:0002032,1.62e-07,161;CL:0000837,1.62e-07,161;CL:0002031,1.70e-07,120;CL:0000094,3.53e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;5.83e-08;53 | |||
|ontology_enrichment_disease=DOID:305!8.96e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.12e-09!15;UBERON:0000179!7.12e-09!15;UBERON:0000463!7.12e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.34e-13;15!UBERON:0000179;1.34e-13;15!UBERON:0000463;1.34e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.07e-13,15;UBERON:0000179,1.07e-13,15;UBERON:0000463,1.07e-13,15 | |||
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| |||
|short_description=p5@UBR2 | |||
}} |
Revision as of 21:02, 13 September 2013
Short description: | p5@UBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_UBR2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -70bp_to_uc003osf.2, uc011dur.1_5end |
EntrezGene: | UBR2 |
HGNC: | 21289 |
UniProt: | Q8IWV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.97e-13 | 53 |
common lymphoid progenitor | 2.97e-13 | 53 |
lymphoid lineage restricted progenitor cell | 7.47e-13 | 52 |
leukocyte | 6.51e-12 | 136 |
hematopoietic cell | 2.45e-10 | 177 |
hematopoietic stem cell | 1.20e-09 | 168 |
blood cell | 1.98e-09 | 11 |
nongranular leukocyte | 2.23e-08 | 115 |
T cell | 6.97e-08 | 25 |
pro-T cell | 6.97e-08 | 25 |
hematopoietic oligopotent progenitor cell | 1.62e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.70e-07 | 120 |
granulocyte | 3.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.07e-13 | 15 |
haemolymphatic fluid | 1.07e-13 | 15 |
organism substance | 1.07e-13 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.