FFCP PHASE1:Hg19::chr7:5569572..5569582,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=132|TSSclassifier=S|UniProt=C9JUM1|association_with_transcript=30bp_to_ENST00000417101_5end|description=CAGE_peak_40_at_ACTB_5end|id=chr7:5569572..5569582,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002592;3.59e-30;3!CL:0000771;2.45e-12;2!CL:0000359;2.63e-11;32!CL:0002567;1.17e-08;3!CL:0000192;1.11e-07;43|ontology_enrichment_celltype_v019_2=CL:0002592,4.17e-30,3;CL:0000771,2.32e-12,2;CL:0000359,2.15e-11,32;CL:0002567,8.96e-09,3;CL:0000192,1.42e-08,43;CL:0000514,1.42e-08,43;CL:0000187,9.00e-07,55|ontology_enrichment_development_v019=UBERON:0009117;7.24e-10;10!UBERON:0005564;7.24e-10;10!CL:0000514;1.11e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003498;3.59e-30;3!UBERON:0005985;3.59e-30;3!UBERON:0001621;3.59e-30;3!UBERON:0000473;4.30e-12;8!UBERON:0003135;4.70e-09;11!UBERON:0004573;1.62e-08;33!UBERON:0004571;1.62e-08;33!UBERON:0001637;2.26e-08;42!UBERON:0003509;2.26e-08;42!UBERON:0004572;2.26e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0001621,4.17e-30,3;UBERON:0003498,1.62e-18,5;UBERON:0005985,1.62e-18,5;UBERON:0000473,4.42e-12,8;UBERON:0004573,4.62e-11,33;UBERON:0004571,4.62e-11,33;UBERON:0003135,4.80e-09,11;UBERON:0001637,9.04e-09,42;UBERON:0003509,9.04e-09,42;UBERON:0004572,9.04e-09,42|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0,0,0,0.654895377488563,0,0.370784442784429,0.649094787309367,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0.626984899610432,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0,0.50496973370552,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,1.06461206063404,0,0.37064843820784,0,0,0,0.38126038784765,0,0,0,0,0,0,0,1.01091240786658,1.58510321173008,0,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0.229073192331831,0.5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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |||
|TSSclassifier=S | |||
|UniProt=C9JUM1 | |||
|association_with_transcript=30bp_to_ENST00000417101_5end | |||
|description=CAGE_peak_40_at_ACTB_5end | |||
|id=chr7:5569572..5569582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002592;3.59e-30;3!CL:0000771;2.45e-12;2!CL:0000359;2.63e-11;32!CL:0002567;1.17e-08;3!CL:0000192;1.11e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,4.17e-30,3;CL:0000771,2.32e-12,2;CL:0000359,2.15e-11,32;CL:0002567,8.96e-09,3;CL:0000192,1.42e-08,43;CL:0000514,1.42e-08,43;CL:0000187,9.00e-07,55 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.24e-10;10!UBERON:0005564;7.24e-10;10!CL:0000514;1.11e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;3.59e-30;3!UBERON:0005985;3.59e-30;3!UBERON:0001621;3.59e-30;3!UBERON:0000473;4.30e-12;8!UBERON:0003135;4.70e-09;11!UBERON:0004573;1.62e-08;33!UBERON:0004571;1.62e-08;33!UBERON:0001637;2.26e-08;42!UBERON:0003509;2.26e-08;42!UBERON:0004572;2.26e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,4.17e-30,3;UBERON:0003498,1.62e-18,5;UBERON:0005985,1.62e-18,5;UBERON:0000473,4.42e-12,8;UBERON:0004573,4.62e-11,33;UBERON:0004571,4.62e-11,33;UBERON:0003135,4.80e-09,11;UBERON:0001637,9.04e-09,42;UBERON:0003509,9.04e-09,42;UBERON:0004572,9.04e-09,42 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0,0,0,0.654895377488563,0,0.370784442784429,0.649094787309367,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0.626984899610432,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0,0.50496973370552,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0.246381468041427,0,0,0,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0,1.06461206063404,0,0.37064843820784,0,0,0,0.38126038784765,0,0,0,0,0,0,0,1.01091240786658,1.58510321173008,0,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0.196498082026242,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0.229073192331831,0.514784993585894,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0.215649622793364,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0.781078098613847,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0.219881033490858,0,0,0.218559560503957,0.470317296361523,0.245148321753905,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0.3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| |||
|short_description=p40@ACTB | |||
}} |
Revision as of 01:39, 14 September 2013
Short description: | p40@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000417101_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | C9JUM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 4.17e-30 | 3 |
eosinophil | 2.32e-12 | 2 |
vascular associated smooth muscle cell | 2.15e-11 | 32 |
light melanocyte | 8.96e-09 | 3 |
smooth muscle cell | 1.42e-08 | 43 |
smooth muscle myoblast | 1.42e-08 | 43 |
muscle cell | 9.00e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 4.17e-30 | 3 |
heart blood vessel | 1.62e-18 | 5 |
coronary vessel | 1.62e-18 | 5 |
testis | 4.42e-12 | 8 |
systemic artery | 4.62e-11 | 33 |
systemic arterial system | 4.62e-11 | 33 |
male reproductive organ | 4.80e-09 | 11 |
artery | 9.04e-09 | 42 |
arterial blood vessel | 9.04e-09 | 42 |
arterial system | 9.04e-09 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.