FFCP PHASE1:Hg19::chr7:23146271..23146285,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55975|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15646|TSSclassifier=S|UniProt=F5GYE2|association_with_transcript=0bp_to_ENST00000479700,ENST00000545771,uc003svt.2,uc011jyu.1_5end|description=CAGE_peak_4_at_KLHL7_5end|id=chr7:23146271..23146285,+|ontology_enrichment_celltype=CL:0000540!2.27e-11!6;CL:0000031!2.27e-11!6;CL:0000404!2.27e-11!6;CL:0000047!4.20e-11!8;CL:0002322!5.86e-08!5;CL:0000133!4.35e-07!59|ontology_enrichment_celltype_v019=CL:0000540;2.07e-56;6!CL:0000404;2.07e-56;6!CL:0002319;1.73e-16;25!CL:0002553;1.39e-10;1|ontology_enrichment_celltype_v019_2=CL:0000047,5.77e-57,8;CL:0000540,2.28e-56,6;CL:0000031,2.28e-56,6;CL:0000404,2.28e-56,6;CL:0002319,1.79e-16,25;CL:0002553,1.10e-10,1;CL:0000133,6.43e-09,59;CL:0000221,3.53e-07,72|ontology_enrichment_development_v019=CL:0000031;2.07e-56;6!UBERON:0010226;3.95e-11;1!UBERON:0004140;3.95e-11;1!UBERON:0010227;7.82e-11;1!UBERON:0005062;1.50e-10;4!UBERON:0007284;1.50e-10;4|ontology_enrichment_disease=DOID:171!4.93e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.01e-22!94;UBERON:0001016!4.01e-22!94;UBERON:0001017!1.04e-20!82;UBERON:0005743!2.56e-20!86;UBERON:0002346!9.31e-18!90;UBERON:0003075!9.67e-16!86;UBERON:0007284!9.67e-16!86;UBERON:0001049!3.12e-15!57;UBERON:0005068!3.12e-15!57;UBERON:0006241!3.12e-15!57;UBERON:0007135!3.12e-15!57;UBERON:0000924!1.87e-14!173;UBERON:0006601!1.87e-14!173;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0000955!1.02e-13!69;UBERON:0006238!1.02e-13!69;UBERON:0003056!2.34e-13!61;UBERON:0003080!2.34e-13!42;UBERON:0002616!3.55e-13!59;UBERON:0004121!6.79e-13!169;UBERON:0001869!2.31e-12!32;UBERON:0002619!4.95e-12!22;UBERON:0000956!9.21e-12!25;UBERON:0000203!9.21e-12!25;UBERON:0001950!1.57e-11!20;UBERON:0001893!2.39e-11!34;UBERON:0002791!1.78e-10!33;UBERON:0002020!4.93e-10!34;UBERON:0003528!4.93e-10!34;UBERON:0007023!1.06e-09!115;UBERON:0000033!2.21e-09!123;UBERON:0000153!1.77e-08!129;UBERON:0007811!1.77e-08!129|ontology_enrichment_uberon_v019=UBERON:0007100;3.23e-18;25!UBERON:0004151;8.44e-14;3!UBERON:0003978;9.29e-14;3!UBERON:0000946;9.29e-14;3!UBERON:0002146;2.53e-11;1!UBERON:0005623;2.53e-11;1!UBERON:0002084;3.95e-11;1!UBERON:0002082;3.95e-11;1!UBERON:0000948;7.69e-11;22!UBERON:0002079;7.82e-11;1!UBERON:0002135;1.39e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.84e-17,27;UBERON:0004151,7.92e-14,3;UBERON:0003978,8.44e-14,3;UBERON:0009751,8.44e-14,3;UBERON:0000946,8.44e-14,3;UBERON:0002523,8.44e-14,3;UBERON:0005983,8.44e-14,3;UBERON:0002165,8.44e-14,3;UBERON:0002062,8.44e-14,3;UBERON:0007280,8.44e-14,3;UBERON:0001017,4.60e-12,81;UBERON:0002146,2.53e-11,1;UBERON:0005623,2.53e-11,1;UBERON:0002084,4.58e-11,1;UBERON:0002082,4.58e-11,1;UBERON:0010226,4.58e-11,1;UBERON:0002079,6.14e-11,1;UBERON:0001016,1.02e-10,89;UBERON:0002135,1.21e-10,1;UBERON:0000948,5.86e-10,24;UBERON:0005498,5.86e-10,24;UBERON:0004140,5.86e-10,24;UBERON:0009881,5.86e-10,24;UBERON:0004141,5.86e-10,24;UBERON:0003084,5.86e-10,24;UBERON:0007005,5.86e-10,24;UBERON:0004139,5.86e-10,24;UBERON:0004291,5.86e-10,24;UBERON:0004121,4.29e-07,171;UBERON:0000924,4.29e-07,171;UBERON:0006601,4.29e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.10366105501537,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,0,2.31986643833309,3.01529277601828,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55975 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15646 | |||
|TSSclassifier=S | |||
|UniProt=F5GYE2 | |||
|association_with_transcript=0bp_to_ENST00000479700,ENST00000545771,uc003svt.2,uc011jyu.1_5end | |||
|description=CAGE_peak_4_at_KLHL7_5end | |||
|id=chr7:23146271..23146285,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.27e-11!6;CL:0000031!2.27e-11!6;CL:0000404!2.27e-11!6;CL:0000047!4.20e-11!8;CL:0002322!5.86e-08!5;CL:0000133!4.35e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.07e-56;6!CL:0000404;2.07e-56;6!CL:0002319;1.73e-16;25!CL:0002553;1.39e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.77e-57,8;CL:0000540,2.28e-56,6;CL:0000031,2.28e-56,6;CL:0000404,2.28e-56,6;CL:0002319,1.79e-16,25;CL:0002553,1.10e-10,1;CL:0000133,6.43e-09,59;CL:0000221,3.53e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.07e-56;6!UBERON:0010226;3.95e-11;1!UBERON:0004140;3.95e-11;1!UBERON:0010227;7.82e-11;1!UBERON:0005062;1.50e-10;4!UBERON:0007284;1.50e-10;4 | |||
|ontology_enrichment_disease=DOID:171!4.93e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.01e-22!94;UBERON:0001016!4.01e-22!94;UBERON:0001017!1.04e-20!82;UBERON:0005743!2.56e-20!86;UBERON:0002346!9.31e-18!90;UBERON:0003075!9.67e-16!86;UBERON:0007284!9.67e-16!86;UBERON:0001049!3.12e-15!57;UBERON:0005068!3.12e-15!57;UBERON:0006241!3.12e-15!57;UBERON:0007135!3.12e-15!57;UBERON:0000924!1.87e-14!173;UBERON:0006601!1.87e-14!173;UBERON:0002780!7.74e-14!41;UBERON:0001890!7.74e-14!41;UBERON:0006240!7.74e-14!41;UBERON:0000955!1.02e-13!69;UBERON:0006238!1.02e-13!69;UBERON:0003056!2.34e-13!61;UBERON:0003080!2.34e-13!42;UBERON:0002616!3.55e-13!59;UBERON:0004121!6.79e-13!169;UBERON:0001869!2.31e-12!32;UBERON:0002619!4.95e-12!22;UBERON:0000956!9.21e-12!25;UBERON:0000203!9.21e-12!25;UBERON:0001950!1.57e-11!20;UBERON:0001893!2.39e-11!34;UBERON:0002791!1.78e-10!33;UBERON:0002020!4.93e-10!34;UBERON:0003528!4.93e-10!34;UBERON:0007023!1.06e-09!115;UBERON:0000033!2.21e-09!123;UBERON:0000153!1.77e-08!129;UBERON:0007811!1.77e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.23e-18;25!UBERON:0004151;8.44e-14;3!UBERON:0003978;9.29e-14;3!UBERON:0000946;9.29e-14;3!UBERON:0002146;2.53e-11;1!UBERON:0005623;2.53e-11;1!UBERON:0002084;3.95e-11;1!UBERON:0002082;3.95e-11;1!UBERON:0000948;7.69e-11;22!UBERON:0002079;7.82e-11;1!UBERON:0002135;1.39e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.84e-17,27;UBERON:0004151,7.92e-14,3;UBERON:0003978,8.44e-14,3;UBERON:0009751,8.44e-14,3;UBERON:0000946,8.44e-14,3;UBERON:0002523,8.44e-14,3;UBERON:0005983,8.44e-14,3;UBERON:0002165,8.44e-14,3;UBERON:0002062,8.44e-14,3;UBERON:0007280,8.44e-14,3;UBERON:0001017,4.60e-12,81;UBERON:0002146,2.53e-11,1;UBERON:0005623,2.53e-11,1;UBERON:0002084,4.58e-11,1;UBERON:0002082,4.58e-11,1;UBERON:0010226,4.58e-11,1;UBERON:0002079,6.14e-11,1;UBERON:0001016,1.02e-10,89;UBERON:0002135,1.21e-10,1;UBERON:0000948,5.86e-10,24;UBERON:0005498,5.86e-10,24;UBERON:0004140,5.86e-10,24;UBERON:0009881,5.86e-10,24;UBERON:0004141,5.86e-10,24;UBERON:0003084,5.86e-10,24;UBERON:0007005,5.86e-10,24;UBERON:0004139,5.86e-10,24;UBERON:0004291,5.86e-10,24;UBERON:0004121,4.29e-07,171;UBERON:0000924,4.29e-07,171;UBERON:0006601,4.29e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.10366105501537,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.695582429850461,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,0,2.31986643833309,3.01529277601828,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.562677665642051,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,3.05163472634166,0.663475559587348,0.591095237907095,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0.91821828489147,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,1.39641200636127,7.33313356837388,0,0.399358000997982,3.86303443322914,3.34757186162809,3.69509098676994,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,2.57205037544031,2.75078873194468,3.73896304226267,0,0,0.364497339948148,0,0,0,0.105600336519406,0,0,2.85878130549347,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0.248385611765534,0,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.895260599125562,0.431299245586727,0.314531883711793,0.218419276384028,0.509197589862076,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,1.60114149657094,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,2.26864526599546,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,2.7348740450911,0,0,0,0,0,1.00885116665647,0,0,0,0.115233987555779,0,0.271878931907327,0.197318320688547,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,3.49080552272302,0,0,0,0,0.126166424835079,0.546327859818478,0,0,0,0.18378979906969,0,0.151557396436479,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@KLHL7 | |||
}} |
Revision as of 00:33, 14 September 2013
Short description: | p4@KLHL7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_KLHL7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479700, ENST00000545771, uc003svt.2, uc011jyu.1_5end |
EntrezGene: | KLHL7 |
HGNC: | 15646 |
UniProt: | F5GYE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.77e-57 | 8 |
neuron | 2.28e-56 | 6 |
neuroblast | 2.28e-56 | 6 |
electrically signaling cell | 2.28e-56 | 6 |
neural cell | 1.79e-16 | 25 |
lung fibroblast | 1.10e-10 | 1 |
neurectodermal cell | 6.43e-09 | 59 |
ectodermal cell | 3.53e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.84e-17 | 27 |
cardiac chamber | 7.92e-14 | 3 |
valve | 8.44e-14 | 3 |
cardiac mesenchyme | 8.44e-14 | 3 |
cardial valve | 8.44e-14 | 3 |
tunica intima | 8.44e-14 | 3 |
heart layer | 8.44e-14 | 3 |
endocardium | 8.44e-14 | 3 |
endocardial cushion | 8.44e-14 | 3 |
presumptive endocardium | 8.44e-14 | 3 |
central nervous system | 4.60e-12 | 81 |
pulmonary valve | 2.53e-11 | 1 |
semi-lunar valve | 2.53e-11 | 1 |
heart left ventricle | 4.58e-11 | 1 |
cardiac ventricle | 4.58e-11 | 1 |
future cardiac ventricle | 4.58e-11 | 1 |
left cardiac atrium | 6.14e-11 | 1 |
nervous system | 1.02e-10 | 89 |
mitral valve | 1.21e-10 | 1 |
heart | 5.86e-10 | 24 |
primitive heart tube | 5.86e-10 | 24 |
primary heart field | 5.86e-10 | 24 |
anterior lateral plate mesoderm | 5.86e-10 | 24 |
heart tube | 5.86e-10 | 24 |
heart primordium | 5.86e-10 | 24 |
cardiac mesoderm | 5.86e-10 | 24 |
cardiogenic plate | 5.86e-10 | 24 |
heart rudiment | 5.86e-10 | 24 |
ectoderm-derived structure | 4.29e-07 | 171 |
ectoderm | 4.29e-07 | 171 |
presumptive ectoderm | 4.29e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.