FFCP PHASE1:Hg19::chr7:122526774..122526797,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93664|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16018|TSSclassifier=S|UniProt=F8W8P5,C9IYE1,F8WDX1,E7EMZ7,Q86UW7,B7ZM57|association_with_transcript=15bp_to_ENST00000313070,ENST00000334010,ENST00000360097,ENST00000420900,NM_001009571,NM_001167940,NM_017954_5end|coexpression_cluster_id=C11|description=CAGE_peak_3_at_CADPS2_5end|id=chr7:122526774..122526797,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.16e-12;82!UBERON:0006215;1.25e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;2.11e-09;10|ontology_enrichment_disease_v019_2=DOID:171,2.07e-09,10|ontology_enrichment_uberon=UBERON:0007023!3.13e-33!115;UBERON:0001049!5.00e-29!57;UBERON:0005068!5.00e-29!57;UBERON:0006241!5.00e-29!57;UBERON:0007135!5.00e-29!57;UBERON:0001017!2.13e-28!82;UBERON:0005743!3.31e-28!86;UBERON:0000073!5.03e-28!94;UBERON:0001016!5.03e-28!94;UBERON:0002616!2.87e-25!59;UBERON:0000955!9.21e-24!69;UBERON:0006238!9.21e-24!69;UBERON:0002346!3.92e-23!90;UBERON:0003080!6.67e-23!42;UBERON:0002780!4.66e-22!41;UBERON:0001890!4.66e-22!41;UBERON:0006240!4.66e-22!41;UBERON:0003075!2.39e-20!86;UBERON:0007284!2.39e-20!86;UBERON:0002619!2.11e-19!22;UBERON:0000924!3.26e-19!173;UBERON:0006601!3.26e-19!173;UBERON:0002020!8.51e-18!34;UBERON:0003528!8.51e-18!34;UBERON:0001950!9.56e-18!20;UBERON:0001893!2.45e-17!34;UBERON:0000956!2.67e-17!25;UBERON:0000203!2.67e-17!25;UBERON:0004121!4.82e-17!169;UBERON:0001869!9.38e-17!32;UBERON:0002791!1.54e-16!33;UBERON:0000033!9.53e-16!123;UBERON:0003056!1.03e-15!61;UBERON:0000153!3.59e-15!129;UBERON:0007811!3.59e-15!129;UBERON:0004111!3.21e-12!241;UBERON:0000025!1.24e-10!194;UBERON:0000477!4.91e-09!286;UBERON:0000468!5.23e-09!659;UBERON:0000475!1.65e-08!365;UBERON:0000922!5.50e-08!612;UBERON:0000062!9.97e-08!511;UBERON:0003076!2.52e-07!15;UBERON:0003057!2.52e-07!15;UBERON:0000200!2.68e-07!6;UBERON:0000483!6.62e-07!309|ontology_enrichment_uberon_v019=UBERON:0002619;1.67e-40;22!UBERON:0001950;2.76e-36;20!UBERON:0000956;3.75e-35;25!UBERON:0000203;3.75e-35;25!UBERON:0001869;1.86e-28;32!UBERON:0001893;1.31e-26;34!UBERON:0003528;3.40e-26;34!UBERON:0002020;3.40e-26;34!UBERON:0002791;1.63e-25;32!UBERON:0002780;2.26e-22;41!UBERON:0001890;2.26e-22;41!UBERON:0000073;7.02e-21;53!UBERON:0002616;7.02e-21;53!UBERON:0000200;8.13e-16;6!UBERON:0000955;2.21e-13;68!UBERON:0001872;7.49e-13;5!UBERON:0001017;1.82e-12;75!UBERON:0000349;2.07e-12;5!UBERON:0001016;2.09e-12;83!UBERON:0001871;2.70e-09;6!UBERON:0002021;3.00e-09;5!UBERON:0002050;8.54e-09;5!UBERON:0005423;8.54e-09;5!UBERON:0001870;1.31e-08;3!UBERON:0007023;1.53e-08;114!UBERON:0004732;6.60e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.38e-40,22;UBERON:0001016,1.58e-36,89;UBERON:0001950,1.92e-36,20;UBERON:0000073,1.48e-35,53;UBERON:0002616,1.48e-35,53;UBERON:0001049,1.53e-35,56;UBERON:0005068,1.53e-35,56;UBERON:0006241,1.53e-35,56;UBERON:0007135,1.53e-35,56;UBERON:0000956,3.17e-35,25;UBERON:0000203,3.17e-35,25;UBERON:0001017,6.41e-35,81;UBERON:0001869,2.66e-32,32;UBERON:0002780,9.17e-32,41;UBERON:0001890,9.17e-32,41;UBERON:0003080,9.17e-32,41;UBERON:0006240,9.17e-32,41;UBERON:0001893,4.35e-30,34;UBERON:0003528,4.84e-30,34;UBERON:0002020,4.84e-30,34;UBERON:0000955,1.74e-29,68;UBERON:0006238,1.74e-29,68;UBERON:0002791,2.78e-29,32;UBERON:0002346,4.33e-27,86;UBERON:0007023,3.37e-25,114;UBERON:0003075,3.25e-23,82;UBERON:0007284,3.25e-23,82;UBERON:0004121,8.44e-23,171;UBERON:0000924,8.44e-23,171;UBERON:0006601,8.44e-23,171;UBERON:0003056,6.09e-21,61;UBERON:0011216,3.38e-18,223;UBERON:0010371,1.09e-17,104;UBERON:0000200,6.03e-16,6;UBERON:0001872,8.88e-13,5;UBERON:0000349,2.28e-12,5;UBERON:0010314,3.03e-12,132;UBERON:0001871,2.31e-09,6;UBERON:0002021,3.08e-09,5;UBERON:0000025,4.11e-09,192;UBERON:0001870,8.85e-09,3;UBERON:0004111,2.33e-08,240;UBERON:0004732,5.90e-07,13|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,1.91033514369878,1.31360943119913,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.523916301990851,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.19276791489337,0.69716365721711,0.932949495138334,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23481738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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16018 | |||
|TSSclassifier=S | |||
|UniProt=F8W8P5,C9IYE1,F8WDX1,E7EMZ7,Q86UW7,B7ZM57 | |||
|association_with_transcript=15bp_to_ENST00000313070,ENST00000334010,ENST00000360097,ENST00000420900,NM_001009571,NM_001167940,NM_017954_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_CADPS2_5end | |||
|id=chr7:122526774..122526797,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-12;82!UBERON:0006215;1.25e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.11e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.07e-09,10 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.67e-40;22!UBERON:0001950;2.76e-36;20!UBERON:0000956;3.75e-35;25!UBERON:0000203;3.75e-35;25!UBERON:0001869;1.86e-28;32!UBERON:0001893;1.31e-26;34!UBERON:0003528;3.40e-26;34!UBERON:0002020;3.40e-26;34!UBERON:0002791;1.63e-25;32!UBERON:0002780;2.26e-22;41!UBERON:0001890;2.26e-22;41!UBERON:0000073;7.02e-21;53!UBERON:0002616;7.02e-21;53!UBERON:0000200;8.13e-16;6!UBERON:0000955;2.21e-13;68!UBERON:0001872;7.49e-13;5!UBERON:0001017;1.82e-12;75!UBERON:0000349;2.07e-12;5!UBERON:0001016;2.09e-12;83!UBERON:0001871;2.70e-09;6!UBERON:0002021;3.00e-09;5!UBERON:0002050;8.54e-09;5!UBERON:0005423;8.54e-09;5!UBERON:0001870;1.31e-08;3!UBERON:0007023;1.53e-08;114!UBERON:0004732;6.60e-07;13 | |||
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| |||
|short_description=p3@CADPS2 | |||
}} |
Revision as of 22:59, 13 September 2013
Short description: | p3@CADPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CADPS2_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 15bp_to_ENST00000313070, ENST00000334010, ENST00000360097, ENST00000420900, NM_001009571, NM_001167940, NM_017954_5end |
EntrezGene: | CADPS2 |
HGNC: | 16018 |
UniProt: | F8W8P5C9IYE1F8WDX1E7EMZ7Q86UW7B7ZM57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.07e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.