FFCP PHASE1:Hg19::chr8:32504790..32504800,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3084|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7997|TSSclassifier=N|UniProt=|association_with_transcript=-436bp_to_ENST00000520502_5end|coexpression_cluster_id=C112|description=CAGE_peak_35_at_NRG1_5end|id=chr8:32504790..32504800,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:169!2.90e-07!6|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14|ontology_enrichment_uberon=UBERON:0001049!1.21e-38!57;UBERON:0005068!1.21e-38!57;UBERON:0006241!1.21e-38!57;UBERON:0007135!1.21e-38!57;UBERON:0000073!2.57e-34!94;UBERON:0001016!2.57e-34!94;UBERON:0002616!6.57e-34!59;UBERON:0000955!3.22e-33!69;UBERON:0006238!3.22e-33!69;UBERON:0001017!3.62e-32!82;UBERON:0003075!5.42e-31!86;UBERON:0007284!5.42e-31!86;UBERON:0005743!2.05e-30!86;UBERON:0002780!6.43e-30!41;UBERON:0001890!6.43e-30!41;UBERON:0006240!6.43e-30!41;UBERON:0002346!2.39e-29!90;UBERON:0003080!4.02e-29!42;UBERON:0002020!1.86e-24!34;UBERON:0003528!1.86e-24!34;UBERON:0001869!1.30e-22!32;UBERON:0000956!2.09e-21!25;UBERON:0000203!2.09e-21!25;UBERON:0003056!3.16e-21!61;UBERON:0001893!3.85e-21!34;UBERON:0004121!8.78e-21!169;UBERON:0002619!1.85e-20!22;UBERON:0000924!3.85e-20!173;UBERON:0006601!3.85e-20!173;UBERON:0001950!1.08e-18!20;UBERON:0002791!1.37e-18!33;UBERON:0000200!2.75e-18!6;UBERON:0007023!2.98e-18!115;UBERON:0000033!2.66e-16!123;UBERON:0000153!2.75e-15!129;UBERON:0007811!2.75e-15!129;UBERON:0000988!1.60e-14!3;UBERON:0002298!2.48e-14!8;UBERON:0002771!1.84e-13!3;UBERON:0001894!3.43e-11!7;UBERON:0006222!3.43e-11!7;UBERON:0001905!1.22e-10!2;UBERON:0002757!1.22e-10!2;UBERON:0010134!1.22e-10!2;UBERON:0002784!1.22e-10!2;UBERON:0005408!1.22e-10!2;UBERON:0001899!1.22e-10!2;UBERON:0003076!1.83e-10!15;UBERON:0003057!1.83e-10!15;UBERON:0002148!4.01e-10!2;UBERON:0009662!4.01e-10!2;UBERON:0004733!1.89e-09!12;UBERON:0002028!1.89e-09!12;UBERON:0007277!1.89e-09!12;UBERON:0000025!2.44e-09!194;UBERON:0004732!1.07e-08!13;UBERON:0000013!1.23e-08!5;UBERON:0002410!1.23e-08!5;UBERON:0001871!1.28e-08!7;UBERON:0004111!5.99e-08!241;UBERON:0001896!3.84e-07!3;UBERON:0005290!3.84e-07!3;UBERON:0010096!3.84e-07!3;UBERON:0006331!5.18e-07!3|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0001894;1.91e-15;7!UBERON:0001041;1.86e-08;14|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,2.74887830798198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.332787154610557,0.434674820589684,0,0.124980407962107,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.17221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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-436bp_to_ENST00000520502_5end | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_35_at_NRG1_5end | |||
|id=chr8:32504790..32504800,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!2.90e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0001894;1.91e-15;7!UBERON:0001041;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8 | |||
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|short_description=p35@NRG1 | |||
}} |
Revision as of 05:07, 14 September 2013
Short description: | p35@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_35_at_NRG1_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -436bp_to_ENST00000520502_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |
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