FFCP PHASE1:Hg19::chr8:57359452..57359471,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5179|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8831|TSSclassifier=S|UniProt=P01210|association_with_transcript=-159bp_to_ENST00000451791_5end|coexpression_cluster_id=C309|description=CAGE_peak_4_at_PENK_5end|id=chr8:57359452..57359471,-|ontology_enrichment_celltype=CL:0000153!1.76e-14!9;CL:0000447!1.76e-14!9;CL:0000667!2.02e-10!6;CL:0000058!2.02e-10!6;CL:0000138!2.02e-10!6;CL:0000499!1.75e-09!27;CL:0000327!4.62e-09!14|ontology_enrichment_celltype_v019=CL:0000062;2.27e-12;9!CL:0000138;1.04e-08;6|ontology_enrichment_celltype_v019_2=CL:0000062,3.67e-10,11;CL:0000375,3.67e-10,11;CL:0000335,3.67e-10,11;CL:0000058,1.26e-08,6;CL:0000138,1.26e-08,6|ontology_enrichment_development_v019=UBERON:0003099;1.61e-13;1!UBERON:0003852;1.61e-13;1!CL:0000335;3.18e-10;11!UBERON:0010122;3.92e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3193;2.50e-07;2!DOID:962;2.50e-07;2|ontology_enrichment_disease_v019_2=DOID:3193,2.43e-07,2;DOID:962,2.43e-07,2|ontology_enrichment_uberon=UBERON:0000369!4.05e-16!4;UBERON:0002435!4.05e-16!4;UBERON:0000204!4.05e-16!4;UBERON:0010082!4.05e-16!4;UBERON:0009663!9.13e-14!7;UBERON:0005383!1.75e-12!3;UBERON:0005382!1.75e-12!3;UBERON:0002308!1.26e-10!9;UBERON:0002420!1.26e-10!9;UBERON:0000125!1.26e-10!9;UBERON:0007245!1.26e-10!9;UBERON:0010009!1.26e-10!9;UBERON:0010011!1.26e-10!9;UBERON:0000454!1.26e-10!9;UBERON:0001049!1.29e-10!57;UBERON:0005068!1.29e-10!57;UBERON:0006241!1.29e-10!57;UBERON:0007135!1.29e-10!57;UBERON:0001873!8.49e-09!2;UBERON:0010122!8.49e-09!2;UBERON:0001017!1.63e-08!82;UBERON:0002780!3.15e-08!41;UBERON:0001890!3.15e-08!41;UBERON:0006240!3.15e-08!41;UBERON:0003080!5.50e-08!42;UBERON:0005743!5.90e-08!86;UBERON:0000073!6.11e-08!94;UBERON:0001016!6.11e-08!94;UBERON:0002346!1.60e-07!90;UBERON:0001869!2.11e-07!32;UBERON:0002616!2.12e-07!59;UBERON:0002791!3.87e-07!33;UBERON:0000153!3.92e-07!129;UBERON:0007811!3.92e-07!129;UBERON:0003075!5.69e-07!86;UBERON:0007284!5.69e-07!86;UBERON:0002020!6.87e-07!34;UBERON:0003528!6.87e-07!34;UBERON:0001893!6.87e-07!34;UBERON:0000924!6.89e-07!173;UBERON:0006601!6.89e-07!173;UBERON:0000033!7.41e-07!123|ontology_enrichment_uberon_v019=UBERON:0000369;9.98e-27;4!UBERON:0002435;9.98e-27;4!UBERON:0000204;9.98e-27;4!UBERON:0005383;1.74e-16;3!UBERON:0005382;1.74e-16;3!UBERON:0009663;1.44e-15;7!UBERON:0005705;1.61e-13;1!UBERON:0008193;1.61e-13;1!UBERON:0010912;1.61e-13;1!UBERON:0002514;1.61e-13;1!UBERON:0003457;1.61e-13;1!UBERON:0008907;1.61e-13;1!UBERON:0008001;1.61e-13;1!UBERON:0007213;1.61e-13;1!UBERON:0009891;1.61e-13;1!UBERON:0007914;1.61e-13;1!UBERON:0007375;1.61e-13;1!UBERON:0003323;1.61e-13;1!UBERON:0010258;1.61e-13;1!UBERON:0005253;1.61e-13;1!UBERON:0007842;1.61e-13;1!UBERON:0002397;1.61e-13;1!UBERON:0003113;1.61e-13;1!UBERON:0003277;1.61e-13;1!UBERON:0001709;1.61e-13;1!UBERON:0002244;1.61e-13;1!UBERON:0005620;1.61e-13;1!UBERON:0010364;1.61e-13;1!UBERON:0004288;1.61e-13;1!UBERON:0001882;5.37e-13;1!UBERON:0001874;5.37e-13;1!UBERON:0005403;5.37e-13;1!UBERON:0002420;3.04e-12;9!UBERON:0000125;3.04e-12;9!UBERON:0007245;3.04e-12;9!UBERON:0002308;3.04e-12;9!UBERON:0010009;3.04e-12;9!UBERON:0010011;3.04e-12;9!UBERON:0000454;3.04e-12;9!UBERON:0004089;2.15e-07;2!UBERON:0003714;2.50e-07;2!UBERON:0001873;3.92e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.89e-27,4;UBERON:0002435,2.89e-27,4;UBERON:0000204,2.89e-27,4;UBERON:0010082,2.89e-27,4;UBERON:0005383,7.30e-17,3;UBERON:0005382,7.30e-17,3;UBERON:0009663,7.15e-16,7;UBERON:0005705,1.61e-13,1;UBERON:0008193,1.61e-13,1;UBERON:0010912,1.61e-13,1;UBERON:0002514,1.61e-13,1;UBERON:0003457,1.61e-13,1;UBERON:0008907,1.61e-13,1;UBERON:0008001,1.61e-13,1;UBERON:0007213,1.61e-13,1;UBERON:0009891,1.61e-13,1;UBERON:0007914,1.61e-13,1;UBERON:0009292,1.61e-13,1;UBERON:0003099,1.61e-13,1;UBERON:0007375,1.61e-13,1;UBERON:0003323,1.61e-13,1;UBERON:0010258,1.61e-13,1;UBERON:0007842,1.61e-13,1;UBERON:0009494,1.61e-13,1;UBERON:0010042,1.61e-13,1;UBERON:0010045,1.61e-13,1;UBERON:0010259,1.61e-13,1;UBERON:0010359,1.61e-13,1;UBERON:0009526,1.61e-13,1;UBERON:0002397,1.61e-13,1;UBERON:0003113,1.61e-13,1;UBERON:0003277,1.61e-13,1;UBERON:0001709,1.61e-13,1;UBERON:0004066,1.61e-13,1;UBERON:0002244,1.61e-13,1;UBERON:0005620,1.61e-13,1;UBERON:0004362,1.61e-13,1;UBERON:0010364,1.61e-13,1;UBERON:0010046,1.61e-13,1;UBERON:0005868,1.61e-13,1;UBERON:0007238,1.61e-13,1;UBERON:0004288,1.61e-13,1;UBERON:0004068,1.61e-13,1;UBERON:0010334,1.61e-13,1;UBERON:0003852,1.61e-13,1;UBERON:0010253,1.61e-13,1;UBERON:0001874,2.95e-13,1;UBERON:0001882,3.76e-13,1;UBERON:0005403,3.76e-13,1;UBERON:0002420,1.77e-12,9;UBERON:0000125,1.77e-12,9;UBERON:0007245,1.77e-12,9;UBERON:0002308,1.77e-12,9;UBERON:0010009,1.77e-12,9;UBERON:0010011,1.77e-12,9;UBERON:0000454,1.77e-12,9;UBERON:0005253,2.15e-07,2;UBERON:0004089,2.15e-07,2;UBERON:0003714,2.43e-07,2;UBERON:0001873,2.74e-07,2;UBERON:0010122,2.74e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5179 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8831 | |||
|TSSclassifier=S | |||
|UniProt=P01210 | |||
|association_with_transcript=-159bp_to_ENST00000451791_5end | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_4_at_PENK_5end | |||
|id=chr8:57359452..57359471,- | |||
|ontology_enrichment_celltype=CL:0000153!1.76e-14!9;CL:0000447!1.76e-14!9;CL:0000667!2.02e-10!6;CL:0000058!2.02e-10!6;CL:0000138!2.02e-10!6;CL:0000499!1.75e-09!27;CL:0000327!4.62e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000062;2.27e-12;9!CL:0000138;1.04e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,3.67e-10,11;CL:0000375,3.67e-10,11;CL:0000335,3.67e-10,11;CL:0000058,1.26e-08,6;CL:0000138,1.26e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.61e-13;1!UBERON:0003852;1.61e-13;1!CL:0000335;3.18e-10;11!UBERON:0010122;3.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.50e-07;2!DOID:962;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,2.43e-07,2;DOID:962,2.43e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000369!4.05e-16!4;UBERON:0002435!4.05e-16!4;UBERON:0000204!4.05e-16!4;UBERON:0010082!4.05e-16!4;UBERON:0009663!9.13e-14!7;UBERON:0005383!1.75e-12!3;UBERON:0005382!1.75e-12!3;UBERON:0002308!1.26e-10!9;UBERON:0002420!1.26e-10!9;UBERON:0000125!1.26e-10!9;UBERON:0007245!1.26e-10!9;UBERON:0010009!1.26e-10!9;UBERON:0010011!1.26e-10!9;UBERON:0000454!1.26e-10!9;UBERON:0001049!1.29e-10!57;UBERON:0005068!1.29e-10!57;UBERON:0006241!1.29e-10!57;UBERON:0007135!1.29e-10!57;UBERON:0001873!8.49e-09!2;UBERON:0010122!8.49e-09!2;UBERON:0001017!1.63e-08!82;UBERON:0002780!3.15e-08!41;UBERON:0001890!3.15e-08!41;UBERON:0006240!3.15e-08!41;UBERON:0003080!5.50e-08!42;UBERON:0005743!5.90e-08!86;UBERON:0000073!6.11e-08!94;UBERON:0001016!6.11e-08!94;UBERON:0002346!1.60e-07!90;UBERON:0001869!2.11e-07!32;UBERON:0002616!2.12e-07!59;UBERON:0002791!3.87e-07!33;UBERON:0000153!3.92e-07!129;UBERON:0007811!3.92e-07!129;UBERON:0003075!5.69e-07!86;UBERON:0007284!5.69e-07!86;UBERON:0002020!6.87e-07!34;UBERON:0003528!6.87e-07!34;UBERON:0001893!6.87e-07!34;UBERON:0000924!6.89e-07!173;UBERON:0006601!6.89e-07!173;UBERON:0000033!7.41e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;9.98e-27;4!UBERON:0002435;9.98e-27;4!UBERON:0000204;9.98e-27;4!UBERON:0005383;1.74e-16;3!UBERON:0005382;1.74e-16;3!UBERON:0009663;1.44e-15;7!UBERON:0005705;1.61e-13;1!UBERON:0008193;1.61e-13;1!UBERON:0010912;1.61e-13;1!UBERON:0002514;1.61e-13;1!UBERON:0003457;1.61e-13;1!UBERON:0008907;1.61e-13;1!UBERON:0008001;1.61e-13;1!UBERON:0007213;1.61e-13;1!UBERON:0009891;1.61e-13;1!UBERON:0007914;1.61e-13;1!UBERON:0007375;1.61e-13;1!UBERON:0003323;1.61e-13;1!UBERON:0010258;1.61e-13;1!UBERON:0005253;1.61e-13;1!UBERON:0007842;1.61e-13;1!UBERON:0002397;1.61e-13;1!UBERON:0003113;1.61e-13;1!UBERON:0003277;1.61e-13;1!UBERON:0001709;1.61e-13;1!UBERON:0002244;1.61e-13;1!UBERON:0005620;1.61e-13;1!UBERON:0010364;1.61e-13;1!UBERON:0004288;1.61e-13;1!UBERON:0001882;5.37e-13;1!UBERON:0001874;5.37e-13;1!UBERON:0005403;5.37e-13;1!UBERON:0002420;3.04e-12;9!UBERON:0000125;3.04e-12;9!UBERON:0007245;3.04e-12;9!UBERON:0002308;3.04e-12;9!UBERON:0010009;3.04e-12;9!UBERON:0010011;3.04e-12;9!UBERON:0000454;3.04e-12;9!UBERON:0004089;2.15e-07;2!UBERON:0003714;2.50e-07;2!UBERON:0001873;3.92e-07;2 | |||
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|short_description=p4@PENK | |||
}} |
Revision as of 05:37, 14 September 2013
Short description: | p4@PENK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PENK_5end |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | -159bp_to_ENST00000451791_5end |
EntrezGene: | PENK |
HGNC: | 8831 |
UniProt: | P01210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 3.67e-10 | 11 |
osteoprogenitor cell | 3.67e-10 | 11 |
mesenchyme condensation cell | 3.67e-10 | 11 |
chondroblast | 1.26e-08 | 6 |
chondrocyte | 1.26e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.43e-07 | 2 |
neurofibroma | 2.43e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.