FFCP PHASE1:Hg19::chr8:93029520..93029534,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1535|TSSclassifier=S|UniProt=Q7Z4J5|association_with_transcript=33bp_to_BT009871,CU675167,JF432279_5end|coexpression_cluster_id=C10|description=CAGE_peak_18_at_RUNX1T1_5end|id=chr8:93029520..93029534,-|ontology_enrichment_celltype=CL:0002620!1.93e-08!23|ontology_enrichment_celltype_v019=CL:0000123;2.60e-19;2!CL:0000242;2.60e-19;2!CL:0000312;2.83e-08;5!CL:0000240;4.95e-07;6!CL:0000311;4.95e-07;6!CL:0000079;4.95e-07;6!CL:0000237;4.95e-07;6|ontology_enrichment_celltype_v019_2=CL:0000242,4.13e-19,2;CL:0000312,3.40e-08,5;CL:0000240,5.75e-07,6;CL:0000311,5.75e-07,6;CL:0000079,5.75e-07,6;CL:0000237,5.75e-07,6;CL:0000036,5.75e-07,6;CL:0000357,5.75e-07,6;CL:0000114,5.75e-07,6|ontology_enrichment_development_v019=UBERON:0000358;1.19e-10;1!CL:0000357;4.95e-07;6!CL:0000114;4.95e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;4.37e-08;5!DOID:450;4.37e-08;5!DOID:66;4.37e-08;5!DOID:423;4.37e-08;5!DOID:0080000;4.37e-08;5!DOID:11722;4.37e-08;5|ontology_enrichment_disease_v019_2=DOID:17,4.37e-08,5;DOID:450,4.37e-08,5;DOID:66,4.37e-08,5;DOID:423,4.37e-08,5;DOID:0080000,4.37e-08,5;DOID:11722,4.37e-08,5|ontology_enrichment_uberon=UBERON:0001017!1.23e-18!82;UBERON:0005743!4.58e-17!86;UBERON:0007023!6.48e-17!115;UBERON:0000073!1.94e-16!94;UBERON:0001016!1.94e-16!94;UBERON:0001049!9.84e-16!57;UBERON:0005068!9.84e-16!57;UBERON:0006241!9.84e-16!57;UBERON:0007135!9.84e-16!57;UBERON:0002020!3.02e-15!34;UBERON:0003528!3.02e-15!34;UBERON:0001869!5.00e-15!32;UBERON:0001893!9.26e-15!34;UBERON:0002616!2.09e-14!59;UBERON:0002791!2.92e-14!33;UBERON:0000955!4.27e-14!69;UBERON:0006238!4.27e-14!69;UBERON:0002780!4.82e-13!41;UBERON:0001890!4.82e-13!41;UBERON:0006240!4.82e-13!41;UBERON:0002619!1.01e-12!22;UBERON:0003080!1.55e-12!42;UBERON:0000956!6.74e-12!25;UBERON:0000203!6.74e-12!25;UBERON:0003075!8.62e-12!86;UBERON:0007284!8.62e-12!86;UBERON:0002346!1.59e-11!90;UBERON:0001950!4.65e-11!20;UBERON:0004121!7.47e-10!169;UBERON:0000924!8.41e-10!173;UBERON:0006601!8.41e-10!173;UBERON:0000475!5.72e-08!365;UBERON:0002199!7.65e-08!45;UBERON:0002416!7.65e-08!45;UBERON:0003056!1.43e-07!61;UBERON:0000153!3.03e-07!129;UBERON:0007811!3.03e-07!129;UBERON:0000033!4.03e-07!123;UBERON:0002097!4.05e-07!40|ontology_enrichment_uberon_v019=UBERON:0002171;1.19e-10;1!UBERON:0006518;1.19e-10;1!UBERON:0008949;1.19e-10;1!UBERON:0000101;1.19e-10;1!UBERON:0002167;1.19e-10;1!UBERON:0005795;2.74e-10;1!UBERON:0001950;2.77e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.08e-10,1;UBERON:0006518,1.08e-10,1;UBERON:0008949,1.08e-10,1;UBERON:0000101,1.08e-10,1;UBERON:0002167,1.08e-10,1;UBERON:0001950,2.77e-07,20|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0,0.500474079487857,0,0,0.30648779579902,0.600952235626387,0,1.4351170855109,1.06778694409284,0.423863802319124,0.300091096084402,0.515262646192195,1.28820270022815,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0.207970861530807,2.14114786556594,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0.322260734604821,0.435050081742686,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z4J5 | |||
|association_with_transcript=33bp_to_BT009871,CU675167,JF432279_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_18_at_RUNX1T1_5end | |||
|id=chr8:93029520..93029534,- | |||
|ontology_enrichment_celltype=CL:0002620!1.93e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.60e-19;2!CL:0000242;2.60e-19;2!CL:0000312;2.83e-08;5!CL:0000240;4.95e-07;6!CL:0000311;4.95e-07;6!CL:0000079;4.95e-07;6!CL:0000237;4.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.13e-19,2;CL:0000312,3.40e-08,5;CL:0000240,5.75e-07,6;CL:0000311,5.75e-07,6;CL:0000079,5.75e-07,6;CL:0000237,5.75e-07,6;CL:0000036,5.75e-07,6;CL:0000357,5.75e-07,6;CL:0000114,5.75e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.19e-10;1!CL:0000357;4.95e-07;6!CL:0000114;4.95e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.37e-08;5!DOID:450;4.37e-08;5!DOID:66;4.37e-08;5!DOID:423;4.37e-08;5!DOID:0080000;4.37e-08;5!DOID:11722;4.37e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.37e-08,5;DOID:450,4.37e-08,5;DOID:66,4.37e-08,5;DOID:423,4.37e-08,5;DOID:0080000,4.37e-08,5;DOID:11722,4.37e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-18!82;UBERON:0005743!4.58e-17!86;UBERON:0007023!6.48e-17!115;UBERON:0000073!1.94e-16!94;UBERON:0001016!1.94e-16!94;UBERON:0001049!9.84e-16!57;UBERON:0005068!9.84e-16!57;UBERON:0006241!9.84e-16!57;UBERON:0007135!9.84e-16!57;UBERON:0002020!3.02e-15!34;UBERON:0003528!3.02e-15!34;UBERON:0001869!5.00e-15!32;UBERON:0001893!9.26e-15!34;UBERON:0002616!2.09e-14!59;UBERON:0002791!2.92e-14!33;UBERON:0000955!4.27e-14!69;UBERON:0006238!4.27e-14!69;UBERON:0002780!4.82e-13!41;UBERON:0001890!4.82e-13!41;UBERON:0006240!4.82e-13!41;UBERON:0002619!1.01e-12!22;UBERON:0003080!1.55e-12!42;UBERON:0000956!6.74e-12!25;UBERON:0000203!6.74e-12!25;UBERON:0003075!8.62e-12!86;UBERON:0007284!8.62e-12!86;UBERON:0002346!1.59e-11!90;UBERON:0001950!4.65e-11!20;UBERON:0004121!7.47e-10!169;UBERON:0000924!8.41e-10!173;UBERON:0006601!8.41e-10!173;UBERON:0000475!5.72e-08!365;UBERON:0002199!7.65e-08!45;UBERON:0002416!7.65e-08!45;UBERON:0003056!1.43e-07!61;UBERON:0000153!3.03e-07!129;UBERON:0007811!3.03e-07!129;UBERON:0000033!4.03e-07!123;UBERON:0002097!4.05e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.19e-10;1!UBERON:0006518;1.19e-10;1!UBERON:0008949;1.19e-10;1!UBERON:0000101;1.19e-10;1!UBERON:0002167;1.19e-10;1!UBERON:0005795;2.74e-10;1!UBERON:0001950;2.77e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.08e-10,1;UBERON:0006518,1.08e-10,1;UBERON:0008949,1.08e-10,1;UBERON:0000101,1.08e-10,1;UBERON:0002167,1.08e-10,1;UBERON:0001950,2.77e-07,20 | |||
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|short_description=p18@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p18@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 33bp_to_BT009871, CU675167, JF432279_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | Q7Z4J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.13e-19 | 2 |
keratinocyte | 3.40e-08 | 5 |
stratified squamous epithelial cell | 5.75e-07 | 6 |
keratin accumulating cell | 5.75e-07 | 6 |
stratified epithelial cell | 5.75e-07 | 6 |
keratinizing barrier epithelial cell | 5.75e-07 | 6 |
epithelial fate stem cell | 5.75e-07 | 6 |
stratified epithelial stem cell | 5.75e-07 | 6 |
surface ectodermal cell | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.08e-10 | 1 |
right lung lobe | 1.08e-10 | 1 |
lower lobe of lung | 1.08e-10 | 1 |
lobe of lung | 1.08e-10 | 1 |
right lung | 1.08e-10 | 1 |
neocortex | 2.77e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.37e-08 | 5 |
myotonic disease | 4.37e-08 | 5 |
muscle tissue disease | 4.37e-08 | 5 |
myopathy | 4.37e-08 | 5 |
muscular disease | 4.37e-08 | 5 |
myotonic dystrophy | 4.37e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.