FFCP PHASE1:Hg19::chr8:93107855..93107901,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=862|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1535|TSSclassifier=S|UniProt=E7EQW7,E7EWJ9,B2R6I9,Q06455,Q7Z4J5,B7Z4P4,E7EPN4|association_with_transcript=0bp_to_ENST00000517919,ENST00000519847,NM_001198625,NM_001198626,NM_001198627,NM_001198631,NM_001198634,NM_001198679_5end|coexpression_cluster_id=C10|description=CAGE_peak_12_at_RUNX1T1_5end|id=chr8:93107855..93107901,-|ontology_enrichment_celltype=CL:0002322!8.60e-07!5|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,9.90e-08,8|ontology_enrichment_development_v019=UBERON:0006965;6.21e-08;2!UBERON:0007297;6.21e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.39e-41!115;UBERON:0001017!5.76e-22!82;UBERON:0005743!2.93e-21!86;UBERON:0001049!3.25e-21!57;UBERON:0005068!3.25e-21!57;UBERON:0006241!3.25e-21!57;UBERON:0007135!3.25e-21!57;UBERON:0000073!4.70e-21!94;UBERON:0001016!4.70e-21!94;UBERON:0002616!1.89e-17!59;UBERON:0000955!8.91e-17!69;UBERON:0006238!8.91e-17!69;UBERON:0003080!1.99e-15!42;UBERON:0002020!2.08e-15!34;UBERON:0003528!2.08e-15!34;UBERON:0001893!3.48e-15!34;UBERON:0002619!8.53e-15!22;UBERON:0002780!1.16e-14!41;UBERON:0001890!1.16e-14!41;UBERON:0006240!1.16e-14!41;UBERON:0002791!1.48e-14!33;UBERON:0001869!6.26e-14!32;UBERON:0001950!2.14e-13!20;UBERON:0003075!3.31e-13!86;UBERON:0007284!3.31e-13!86;UBERON:0002346!9.86e-13!90;UBERON:0000956!2.24e-12!25;UBERON:0000203!2.24e-12!25;UBERON:0003135!8.46e-10!11;UBERON:0003056!1.75e-09!61;UBERON:0004121!2.78e-09!169;UBERON:0000924!3.91e-09!173;UBERON:0006601!3.91e-09!173;UBERON:0000153!9.05e-08!129;UBERON:0007811!9.05e-08!129;UBERON:0000033!1.77e-07!123;UBERON:0000473!3.70e-07!8;UBERON:0003076!4.76e-07!15;UBERON:0003057!4.76e-07!15;UBERON:0004732!4.96e-07!13|ontology_enrichment_uberon_v019=UBERON:0000922;8.87e-21;49!UBERON:0000160;3.53e-09;17!UBERON:0003135;6.03e-08;11!UBERON:0000473;2.18e-07;8!UBERON:0002108;3.69e-07;4!UBERON:0005409;5.79e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.24e-09,17;UBERON:0007023,1.48e-08,114;UBERON:0003135,4.77e-08,11;UBERON:0000473,1.92e-07,8;UBERON:0002108,3.63e-07,4|phase1_expression=0.363356758541113,0,0.845726424575827,0,0,0.872338524100369,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0.772921620136887,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,1.46368447355514,2.78312513475119,0.929551542956147,0.829288440122964,0.756962552626885,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0.307007349452259,0,0.322260734604821,0.290033387828457,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.987884678879706,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.19548792950642,1.10513566212459,0,0,0,0,0,0,0,1.28236427328014,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,1.04174996959975,0,0.120596438625408,1.52581736317083,1.43753037910592,0.886642856860642,0,0,0,2.77020930613669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.619202951523374,5.49927130440263,0.296521128680622,0,0,0.269604531922708,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,7.03967351750127,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.387956065953678,0,0.677942222341597,0,0,0.569797163602908,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,1.3749625440701,0,0.199679000498991,0.429226048136571,0,0.940568614814168,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,2.08979093004525,2.33817042215297,2.90808236620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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |||
|TSSclassifier=S | |||
|UniProt=E7EQW7,E7EWJ9,B2R6I9,Q06455,Q7Z4J5,B7Z4P4,E7EPN4 | |||
|association_with_transcript=0bp_to_ENST00000517919,ENST00000519847,NM_001198625,NM_001198626,NM_001198627,NM_001198631,NM_001198634,NM_001198679_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_12_at_RUNX1T1_5end | |||
|id=chr8:93107855..93107901,- | |||
|ontology_enrichment_celltype=CL:0002322!8.60e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.90e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.21e-08;2!UBERON:0007297;6.21e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.39e-41!115;UBERON:0001017!5.76e-22!82;UBERON:0005743!2.93e-21!86;UBERON:0001049!3.25e-21!57;UBERON:0005068!3.25e-21!57;UBERON:0006241!3.25e-21!57;UBERON:0007135!3.25e-21!57;UBERON:0000073!4.70e-21!94;UBERON:0001016!4.70e-21!94;UBERON:0002616!1.89e-17!59;UBERON:0000955!8.91e-17!69;UBERON:0006238!8.91e-17!69;UBERON:0003080!1.99e-15!42;UBERON:0002020!2.08e-15!34;UBERON:0003528!2.08e-15!34;UBERON:0001893!3.48e-15!34;UBERON:0002619!8.53e-15!22;UBERON:0002780!1.16e-14!41;UBERON:0001890!1.16e-14!41;UBERON:0006240!1.16e-14!41;UBERON:0002791!1.48e-14!33;UBERON:0001869!6.26e-14!32;UBERON:0001950!2.14e-13!20;UBERON:0003075!3.31e-13!86;UBERON:0007284!3.31e-13!86;UBERON:0002346!9.86e-13!90;UBERON:0000956!2.24e-12!25;UBERON:0000203!2.24e-12!25;UBERON:0003135!8.46e-10!11;UBERON:0003056!1.75e-09!61;UBERON:0004121!2.78e-09!169;UBERON:0000924!3.91e-09!173;UBERON:0006601!3.91e-09!173;UBERON:0000153!9.05e-08!129;UBERON:0007811!9.05e-08!129;UBERON:0000033!1.77e-07!123;UBERON:0000473!3.70e-07!8;UBERON:0003076!4.76e-07!15;UBERON:0003057!4.76e-07!15;UBERON:0004732!4.96e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.87e-21;49!UBERON:0000160;3.53e-09;17!UBERON:0003135;6.03e-08;11!UBERON:0000473;2.18e-07;8!UBERON:0002108;3.69e-07;4!UBERON:0005409;5.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.24e-09,17;UBERON:0007023,1.48e-08,114;UBERON:0003135,4.77e-08,11;UBERON:0000473,1.92e-07,8;UBERON:0002108,3.63e-07,4 | |||
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|short_description=p12@RUNX1T1 | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p12@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000517919, ENST00000519847, NM_001198625, NM_001198626, NM_001198627, NM_001198631, NM_001198634, NM_001198679_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E7EQW7E7EWJ9B2R6I9Q06455Q7Z4J5B7Z4P4E7EPN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.90e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.24e-09 | 17 |
adult organism | 1.48e-08 | 114 |
male reproductive organ | 4.77e-08 | 11 |
testis | 1.92e-07 | 8 |
small intestine | 3.63e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.