FFCP PHASE1:Hg19::chr9:130524572..130524584,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10044|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16884|TSSclassifier=S|UniProt=|association_with_transcript=-6bp_to_ENST00000488685_5end|description=CAGE_peak_14_at_SH2D3C_5end|id=chr9:130524572..130524584,-|ontology_enrichment_celltype=CL:0000071!1.87e-12!18;CL:0002546!1.87e-12!18;CL:0000115!4.22e-11!35;CL:0002139!1.18e-10!24;CL:0002078!3.88e-08!44;CL:1000413!2.91e-07!9|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;4.37e-41;4!UBERON:0007284;4.37e-41;4!UBERON:0004872;3.30e-11;7!UBERON:0006965;2.72e-10;2|ontology_enrichment_disease=DOID:114!8.85e-07!2|ontology_enrichment_disease_v019=DOID:114;6.22e-37;2!DOID:178;3.25e-19;1!DOID:326;3.25e-19;1!DOID:3978;3.25e-19;1!DOID:3394;3.25e-19;1!DOID:5844;3.25e-19;1!DOID:1287;4.92e-19;4|ontology_enrichment_disease_v019_2=DOID:114,4.73e-37,2;DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:1287,4.29e-19,4|ontology_enrichment_uberon=UBERON:0007023!1.64e-36!115;UBERON:0001986!1.87e-12!18;UBERON:0004638!1.87e-12!18;UBERON:0004852!1.87e-12!18;UBERON:0003103!6.89e-10!69;UBERON:0000487!8.73e-10!22;UBERON:0003978!2.43e-09!3;UBERON:0009751!2.43e-09!3;UBERON:0000946!2.43e-09!3;UBERON:0002523!2.43e-09!3;UBERON:0005983!2.43e-09!3;UBERON:0002165!2.43e-09!3;UBERON:0002062!2.43e-09!3;UBERON:0007280!2.43e-09!3;UBERON:0006914!2.37e-08!25;UBERON:0000477!3.10e-08!286;UBERON:0004111!5.41e-08!241;UBERON:0000025!5.96e-08!194;UBERON:0004872!2.65e-07!84;UBERON:0003915!2.91e-07!9;UBERON:0004700!2.91e-07!9;UBERON:0001917!2.91e-07!9;UBERON:0002133!7.94e-07!2|ontology_enrichment_uberon_v019=UBERON:0003978;1.81e-54;3!UBERON:0000946;1.81e-54;3!UBERON:0002133;3.94e-37;2!UBERON:0002134;8.94e-20;1!UBERON:0005208;8.94e-20;1!UBERON:0004145;8.94e-20;1!UBERON:0005946;8.94e-20;1!UBERON:0005965;8.94e-20;1!UBERON:0002078;8.94e-20;1!UBERON:0002171;1.42e-19;1!UBERON:0006518;1.42e-19;1!UBERON:0008949;1.42e-19;1!UBERON:0000101;1.42e-19;1!UBERON:0002167;1.42e-19;1!UBERON:0002135;3.25e-19;1!UBERON:0002146;3.25e-19;1!UBERON:0005623;3.25e-19;1!UBERON:0007100;3.74e-18;25!UBERON:0010313;6.53e-17;10!UBERON:0002081;1.43e-10;2!UBERON:0000948;5.01e-08;22!UBERON:0004151;1.82e-07;3!UBERON:0002106;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.51e-54,3;UBERON:0009751,1.51e-54,3;UBERON:0000946,1.51e-54,3;UBERON:0002523,1.51e-54,3;UBERON:0005983,1.51e-54,3;UBERON:0002165,1.51e-54,3;UBERON:0002062,1.51e-54,3;UBERON:0007280,1.51e-54,3;UBERON:0002133,2.27e-37,2;UBERON:0004797,7.15e-24,7;UBERON:0002134,8.95e-20,1;UBERON:0005208,8.95e-20,1;UBERON:0005946,8.95e-20,1;UBERON:0005965,8.95e-20,1;UBERON:0002078,8.95e-20,1;UBERON:0002171,1.56e-19,1;UBERON:0006518,1.56e-19,1;UBERON:0008949,1.56e-19,1;UBERON:0000101,1.56e-19,1;UBERON:0002167,1.56e-19,1;UBERON:0002135,1.88e-19,1;UBERON:0002146,4.69e-19,1;UBERON:0005623,4.69e-19,1;UBERON:0010313,6.19e-17,10;UBERON:0002342,6.19e-17,10;UBERON:0005062,6.19e-17,10;UBERON:0007100,7.39e-17,27;UBERON:0002081,1.43e-10,2;UBERON:0010227,1.43e-10,2;UBERON:0005157,9.28e-10,47;UBERON:0007023,1.06e-09,114;UBERON:0003103,2.03e-09,68;UBERON:0007500,1.04e-07,59;UBERON:0001981,1.04e-07,59;UBERON:0004537,1.04e-07,59;UBERON:0006965,1.04e-07,59;UBERON:0004872,1.14e-07,83;UBERON:0001009,1.47e-07,112;UBERON:0004151,1.82e-07,3;UBERON:0004145,1.82e-07,3;UBERON:0000948,2.06e-07,24;UBERON:0005498,2.06e-07,24;UBERON:0004140,2.06e-07,24;UBERON:0009881,2.06e-07,24;UBERON:0004141,2.06e-07,24;UBERON:0003084,2.06e-07,24;UBERON:0007005,2.06e-07,24;UBERON:0004139,2.06e-07,24;UBERON:0004291,2.06e-07,24;UBERON:0002106,2.47e-07,3;UBERON:0004854,2.47e-07,3;UBERON:0009034,2.47e-07,3;UBERON:0002095,2.47e-07,3;UBERON:0004782,2.47e-07,3;UBERON:0003281,2.47e-07,3;UBERON:0009664,2.47e-07,3;UBERON:0002296,2.47e-07,3;UBERON:0005602,2.47e-07,3;UBERON:0001179,2.47e-07,3;UBERON:0006293,2.47e-07,3;UBERON:0003887,6.74e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,1.25849830862972,0.825354125820202,0.626984899610432,0.258416759169329,0,0,0,0.760272105718513,0.976248230192678,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000488685_5end | |||
|description=CAGE_peak_14_at_SH2D3C_5end | |||
|id=chr9:130524572..130524584,- | |||
|ontology_enrichment_celltype=CL:0000071!1.87e-12!18;CL:0002546!1.87e-12!18;CL:0000115!4.22e-11!35;CL:0002139!1.18e-10!24;CL:0002078!3.88e-08!44;CL:1000413!2.91e-07!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.37e-41;4!UBERON:0007284;4.37e-41;4!UBERON:0004872;3.30e-11;7!UBERON:0006965;2.72e-10;2 | |||
|ontology_enrichment_disease=DOID:114!8.85e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;6.22e-37;2!DOID:178;3.25e-19;1!DOID:326;3.25e-19;1!DOID:3978;3.25e-19;1!DOID:3394;3.25e-19;1!DOID:5844;3.25e-19;1!DOID:1287;4.92e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.73e-37,2;DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:1287,4.29e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-36!115;UBERON:0001986!1.87e-12!18;UBERON:0004638!1.87e-12!18;UBERON:0004852!1.87e-12!18;UBERON:0003103!6.89e-10!69;UBERON:0000487!8.73e-10!22;UBERON:0003978!2.43e-09!3;UBERON:0009751!2.43e-09!3;UBERON:0000946!2.43e-09!3;UBERON:0002523!2.43e-09!3;UBERON:0005983!2.43e-09!3;UBERON:0002165!2.43e-09!3;UBERON:0002062!2.43e-09!3;UBERON:0007280!2.43e-09!3;UBERON:0006914!2.37e-08!25;UBERON:0000477!3.10e-08!286;UBERON:0004111!5.41e-08!241;UBERON:0000025!5.96e-08!194;UBERON:0004872!2.65e-07!84;UBERON:0003915!2.91e-07!9;UBERON:0004700!2.91e-07!9;UBERON:0001917!2.91e-07!9;UBERON:0002133!7.94e-07!2 | |||
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|short_description=p14@SH2D3C | |||
}} |
Revision as of 07:33, 14 September 2013
Short description: | p14@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SH2D3C_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000488685_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.73e-37 | 2 |
vascular disease | 2.71e-19 | 1 |
ischemia | 2.71e-19 | 1 |
extrinsic cardiomyopathy | 2.71e-19 | 1 |
myocardial ischemia | 2.71e-19 | 1 |
myocardial infarction | 2.71e-19 | 1 |
cardiovascular system disease | 4.29e-19 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.