FFCP PHASE1:Hg19::chrX:33357577..33357588,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1756|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2928|TSSclassifier=S|UniProt=Q4G0X0|association_with_transcript=-19bp_to_ENST00000288447_5end|coexpression_cluster_id=C38|description=CAGE_peak_21_at_DMD_5end|id=chrX:33357577..33357588,-|ontology_enrichment_celltype=CL:0002150!2.06e-11!3;CL:0000861!2.06e-11!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.06e-23;1!DOID:4549;1.06e-23;1!DOID:5861;1.06e-23;1!DOID:6496;1.06e-23;1|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1|ontology_enrichment_uberon=UBERON:0002020!2.74e-59!34;UBERON:0003528!2.74e-59!34;UBERON:0001893!1.87e-54!34;UBERON:0001049!3.83e-54!57;UBERON:0005068!3.83e-54!57;UBERON:0006241!3.83e-54!57;UBERON:0007135!3.83e-54!57;UBERON:0002780!2.44e-53!41;UBERON:0001890!2.44e-53!41;UBERON:0006240!2.44e-53!41;UBERON:0001869!5.47e-53!32;UBERON:0002619!2.66e-52!22;UBERON:0003080!6.01e-52!42;UBERON:0002791!3.15e-51!33;UBERON:0001950!3.52e-51!20;UBERON:0002616!2.62e-48!59;UBERON:0000956!9.92e-46!25;UBERON:0000203!9.92e-46!25;UBERON:0001017!3.50e-43!82;UBERON:0000955!1.09e-42!69;UBERON:0006238!1.09e-42!69;UBERON:0005743!7.57e-41!86;UBERON:0000073!1.04e-38!94;UBERON:0001016!1.04e-38!94;UBERON:0003075!1.14e-38!86;UBERON:0007284!1.14e-38!86;UBERON:0002346!1.28e-36!90;UBERON:0003056!4.90e-34!61;UBERON:0007023!2.10e-25!115;UBERON:0001871!5.05e-24!7;UBERON:0000200!1.12e-23!6;UBERON:0000153!5.98e-23!129;UBERON:0007811!5.98e-23!129;UBERON:0000033!9.30e-23!123;UBERON:0004121!1.49e-19!169;UBERON:0000924!6.41e-19!173;UBERON:0006601!6.41e-19!173;UBERON:0002420!3.44e-15!9;UBERON:0007245!3.44e-15!9;UBERON:0010009!3.44e-15!9;UBERON:0010011!3.44e-15!9;UBERON:0000454!3.44e-15!9;UBERON:0002308!1.01e-14!9;UBERON:0000125!1.01e-14!9;UBERON:0000349!3.27e-13!5;UBERON:0002771!5.79e-13!3;UBERON:0001872!1.12e-12!5;UBERON:0006331!4.40e-12!3;UBERON:0000988!8.40e-12!3;UBERON:0002298!1.68e-11!8;UBERON:0000025!6.50e-11!194;UBERON:0001905!1.53e-09!2;UBERON:0002757!1.53e-09!2;UBERON:0010134!1.53e-09!2;UBERON:0002784!1.53e-09!2;UBERON:0005408!1.53e-09!2;UBERON:0001899!1.53e-09!2;UBERON:0001870!1.73e-09!2;UBERON:0001876!2.92e-09!2;UBERON:0009663!6.10e-09!7;UBERON:0000064!1.03e-08!219;UBERON:0002148!1.58e-08!2;UBERON:0009662!1.58e-08!2;UBERON:0004111!3.43e-08!241;UBERON:0002021!8.16e-08!5;UBERON:0000483!2.84e-07!309;UBERON:0000119!3.95e-07!312;UBERON:0000477!4.33e-07!286|ontology_enrichment_uberon_v019=UBERON:0001905;1.22e-44;2!UBERON:0002757;1.22e-44;2!UBERON:0010134;1.22e-44;2!UBERON:0005408;1.22e-44;2!UBERON:0001899;1.22e-44;2!UBERON:0002619;2.96e-34;22!UBERON:0000956;2.49e-30;25!UBERON:0000203;2.49e-30;25!UBERON:0001870;3.59e-30;3!UBERON:0001950;2.81e-26;20!UBERON:0001869;5.75e-24;32!UBERON:0002780;1.26e-23;41!UBERON:0001890;1.26e-23;41!UBERON:0003296;6.42e-23;4!UBERON:0010133;6.42e-23;4!UBERON:0002784;6.42e-23;4!UBERON:0003528;2.11e-22;34!UBERON:0002791;2.11e-22;32!UBERON:0002020;2.11e-22;34!UBERON:0001893;9.11e-22;34!UBERON:0000200;1.22e-15;6!UBERON:0000073;1.29e-14;53!UBERON:0002616;1.29e-14;53!UBERON:0001894;1.49e-13;7!UBERON:0002771;2.45e-12;2!UBERON:0001954;2.45e-12;2!UBERON:0002702;2.45e-12;2!UBERON:0003022;2.45e-12;2!UBERON:0002421;2.45e-12;2!UBERON:0002600;2.45e-12;2!UBERON:0000955;3.93e-11;68!UBERON:0002418;8.31e-09;3!UBERON:0004755;8.31e-09;3!UBERON:0001017;8.06e-08;75|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.00e-45,2;UBERON:0002757,5.00e-45,2;UBERON:0010134,5.00e-45,2;UBERON:0005408,5.00e-45,2;UBERON:0001899,5.00e-45,2;UBERON:0002619,3.73e-34,22;UBERON:0002780,3.71e-33,41;UBERON:0001890,3.71e-33,41;UBERON:0003080,3.71e-33,41;UBERON:0006240,3.71e-33,41;UBERON:0000956,3.06e-30,25;UBERON:0000203,3.06e-30,25;UBERON:0001870,3.10e-30,3;UBERON:0001950,2.89e-26,20;UBERON:0000073,8.66e-26,53;UBERON:0002616,8.66e-26,53;UBERON:0001049,1.98e-24,56;UBERON:0005068,1.98e-24,56;UBERON:0006241,1.98e-24,56;UBERON:0007135,1.98e-24,56;UBERON:0002791,7.24e-24,32;UBERON:0001869,7.24e-24,32;UBERON:0003296,4.11e-23,4;UBERON:0010133,4.11e-23,4;UBERON:0002784,4.11e-23,4;UBERON:0003528,1.64e-22,34;UBERON:0002020,1.64e-22,34;UBERON:0001893,1.64e-22,34;UBERON:0003056,1.86e-22,61;UBERON:0000955,7.01e-20,68;UBERON:0006238,7.01e-20,68;UBERON:0001017,9.49e-17,81;UBERON:0003075,9.49e-17,82;UBERON:0007284,9.49e-17,82;UBERON:0002346,5.67e-16,86;UBERON:0000200,9.74e-16,6;UBERON:0001016,4.27e-15,89;UBERON:0001894,1.15e-13,7;UBERON:0006222,1.15e-13,7;UBERON:0010371,3.32e-13,104;UBERON:0002702,1.65e-12,2;UBERON:0002771,2.59e-12,2;UBERON:0001954,3.62e-12,2;UBERON:0003022,3.62e-12,2;UBERON:0002421,3.62e-12,2;UBERON:0002600,3.62e-12,2;UBERON:0007023,3.80e-12,114;UBERON:0010314,2.24e-10,132;UBERON:0002418,8.31e-09,3;UBERON:0004755,8.31e-09,3;UBERON:0004121,7.35e-08,171;UBERON:0000924,7.35e-08,171;UBERON:0006601,7.35e-08,171;UBERON:000002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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |||
|TSSclassifier=S | |||
|UniProt=Q4G0X0 | |||
|association_with_transcript=-19bp_to_ENST00000288447_5end | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_21_at_DMD_5end | |||
|id=chrX:33357577..33357588,- | |||
|ontology_enrichment_celltype=CL:0002150!2.06e-11!3;CL:0000861!2.06e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.06e-23;1!DOID:4549;1.06e-23;1!DOID:5861;1.06e-23;1!DOID:6496;1.06e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1 | |||
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|short_description=p21@DMD | |||
}} |
Revision as of 11:46, 14 September 2013
Short description: | p21@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_DMD_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -19bp_to_ENST00000288447_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | Q4G0X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.07e-23 | 1 |
extraosseous chondrosarcoma | 1.07e-23 | 1 |
myxoid chondrosarcoma | 1.07e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.07e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.